EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000000632 (Gene tree)
Gene ID: 533414
Gene Symbol: RAD54B
Alias: -
Full Name: Bos taurus RAD54 homolog B (RAD54B)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 118089 bases
Position: chr14:69858330-69976418
Accession: NM_001192955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000000833	ResIII	PF04851.15	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000000833	-	3015	XM_005215669	ENSBTAP00000000833	909 (aa)	XP_005215726	F1MSA4

Gene Model

Click here to download ENSBTAG00000000632's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000000632	RAD54B	72	44.096	ENSBTAG00000019901	RAD54L	82	45.008
ENSBTAG00000000632	RAD54B	52	35.437	ENSBTAG00000005979	HELLS	66	35.437
ENSBTAG00000000632	RAD54B	60	32.517	ENSBTAG00000002292	SMARCA1	50	31.849
ENSBTAG00000000632	RAD54B	55	31.262	ENSBTAG00000020831	CHD1L	50	31.262
ENSBTAG00000000632	RAD54B	55	33.462	ENSBTAG00000017776	CHD2	56	33.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000632	RAD54B	80	88.690	ENSG00000265817	FSBP	99	88.690	Homo_sapiens
ENSBTAG00000000632	RAD54B	99	85.699	ENSG00000197275	RAD54B	99	85.699	Homo_sapiens
ENSBTAG00000000632	RAD54B	100	87.706	ENSAMEG00000005834	-	100	87.706	Ailuropoda_melanoleuca
ENSBTAG00000000632	RAD54B	99	55.131	ENSACIG00000013005	rad54b	99	55.131	Amphilophus_citrinellus
ENSBTAG00000000632	RAD54B	99	55.460	ENSAOCG00000008523	rad54b	99	55.460	Amphiprion_ocellaris
ENSBTAG00000000632	RAD54B	99	55.087	ENSAPEG00000001673	rad54b	99	55.195	Amphiprion_percula
ENSBTAG00000000632	RAD54B	99	54.267	ENSATEG00000001527	rad54b	99	54.267	Anabas_testudineus
ENSBTAG00000000632	RAD54B	99	67.869	ENSAPLG00000014366	-	99	67.869	Anas_platyrhynchos
ENSBTAG00000000632	RAD54B	88	71.250	ENSACAG00000003671	-	99	71.250	Anolis_carolinensis
ENSBTAG00000000632	RAD54B	71	86.090	ENSANAG00000019528	-	99	86.090	Aotus_nancymaae
ENSBTAG00000000632	RAD54B	86	59.975	ENSACLG00000007826	rad54b	92	59.975	Astatotilapia_calliptera
ENSBTAG00000000632	RAD54B	85	58.471	ENSAMXG00000039985	rad54b	95	58.291	Astyanax_mexicanus
ENSBTAG00000000632	RAD54B	79	34.707	WBGene00013792	Y116A8C.13	83	34.940	Caenorhabditis_elegans
ENSBTAG00000000632	RAD54B	99	84.488	ENSCJAG00000000080	-	99	86.878	Callithrix_jacchus
ENSBTAG00000000632	RAD54B	100	86.169	ENSCAFG00000009179	RAD54B	99	86.169	Canis_familiaris
ENSBTAG00000000632	RAD54B	100	85.950	ENSCAFG00020012084	-	99	85.950	Canis_lupus_dingo
ENSBTAG00000000632	RAD54B	100	97.690	ENSCHIG00000008230	-	100	97.690	Capra_hircus
ENSBTAG00000000632	RAD54B	100	84.286	ENSTSYG00000013234	-	100	84.286	Carlito_syrichta
ENSBTAG00000000632	RAD54B	100	80.879	ENSCPOG00000011643	-	99	80.879	Cavia_porcellus
ENSBTAG00000000632	RAD54B	99	84.268	ENSCCAG00000011754	-	99	87.017	Cebus_capucinus
ENSBTAG00000000632	RAD54B	99	85.352	ENSCATG00000030661	-	99	88.536	Cercocebus_atys
ENSBTAG00000000632	RAD54B	99	81.848	ENSCLAG00000010476	-	99	81.848	Chinchilla_lanigera
ENSBTAG00000000632	RAD54B	99	85.242	ENSCSAG00000012712	-	99	85.242	Chlorocebus_sabaeus
ENSBTAG00000000632	RAD54B	99	69.239	ENSCPBG00000003204	-	99	69.740	Chrysemys_picta_bellii
ENSBTAG00000000632	RAD54B	99	85.793	ENSCANG00000017939	-	99	88.674	Colobus_angolensis_palliatus
ENSBTAG00000000632	RAD54B	100	76.974	ENSCGRG00001020184	Rad54b	100	76.974	Cricetulus_griseus_chok1gshd
ENSBTAG00000000632	RAD54B	100	75.299	ENSCGRG00000016752	Rad54b	100	75.299	Cricetulus_griseus_crigri
ENSBTAG00000000632	RAD54B	86	59.068	ENSCSEG00000001601	rad54b	93	59.068	Cynoglossus_semilaevis
ENSBTAG00000000632	RAD54B	99	56.739	ENSCVAG00000009200	rad54b	99	56.739	Cyprinodon_variegatus
ENSBTAG00000000632	RAD54B	100	53.275	ENSDARG00000092134	rad54b	100	59.908	Danio_rerio
ENSBTAG00000000632	RAD54B	99	83.461	ENSDNOG00000015535	-	99	83.461	Dasypus_novemcinctus
ENSBTAG00000000632	RAD54B	100	81.538	ENSDORG00000002492	Rad54b	100	81.538	Dipodomys_ordii
ENSBTAG00000000632	RAD54B	87	80.735	ENSETEG00000010605	-	100	80.735	Echinops_telfairi
ENSBTAG00000000632	RAD54B	99	46.262	ENSEBUG00000009104	rad54b	98	46.187	Eptatretus_burgeri
ENSBTAG00000000632	RAD54B	97	86.652	ENSEASG00005004021	-	100	86.652	Equus_asinus_asinus
ENSBTAG00000000632	RAD54B	100	87.157	ENSECAG00000021949	-	99	87.157	Equus_caballus
ENSBTAG00000000632	RAD54B	79	84.472	ENSEEUG00000008056	-	79	84.472	Erinaceus_europaeus
ENSBTAG00000000632	RAD54B	99	54.100	ENSELUG00000009287	rad54b	99	54.140	Esox_lucius
ENSBTAG00000000632	RAD54B	100	87.047	ENSFCAG00000015513	-	100	90.358	Felis_catus
ENSBTAG00000000632	RAD54B	99	66.415	ENSFALG00000005467	-	99	66.415	Ficedula_albicollis
ENSBTAG00000000632	RAD54B	99	82.068	ENSFDAG00000020541	-	100	82.068	Fukomys_damarensis
ENSBTAG00000000632	RAD54B	86	59.497	ENSFHEG00000014382	rad54b	87	59.320	Fundulus_heteroclitus
ENSBTAG00000000632	RAD54B	86	56.875	ENSGMOG00000014774	rad54b	98	56.875	Gadus_morhua
ENSBTAG00000000632	RAD54B	99	66.306	ENSGALG00000043597	RAD54B	99	66.306	Gallus_gallus
ENSBTAG00000000632	RAD54B	99	54.835	ENSGAFG00000007901	rad54b	99	54.989	Gambusia_affinis
ENSBTAG00000000632	RAD54B	99	55.508	ENSGACG00000009128	rad54b	99	55.508	Gasterosteus_aculeatus
ENSBTAG00000000632	RAD54B	99	68.811	ENSGAGG00000018747	-	99	68.811	Gopherus_agassizii
ENSBTAG00000000632	RAD54B	100	85.275	ENSGGOG00000023516	-	100	85.275	Gorilla_gorilla
ENSBTAG00000000632	RAD54B	99	54.633	ENSHBUG00000016017	rad54b	99	54.633	Haplochromis_burtoni
ENSBTAG00000000632	RAD54B	100	80.262	ENSHGLG00000008263	RAD54B	99	80.262	Heterocephalus_glaber_female
ENSBTAG00000000632	RAD54B	100	79.523	ENSHGLG00100008108	-	99	79.523	Heterocephalus_glaber_male
ENSBTAG00000000632	RAD54B	99	54.357	ENSHCOG00000004764	rad54b	98	56.296	Hippocampus_comes
ENSBTAG00000000632	RAD54B	100	51.411	ENSIPUG00000018531	rad54b	99	51.411	Ictalurus_punctatus
ENSBTAG00000000632	RAD54B	99	81.989	ENSSTOG00000010791	-	99	81.989	Ictidomys_tridecemlineatus
ENSBTAG00000000632	RAD54B	100	79.473	ENSJJAG00000010314	Rad54b	100	79.473	Jaculus_jaculus
ENSBTAG00000000632	RAD54B	99	54.158	ENSKMAG00000004744	rad54b	99	54.158	Kryptolebias_marmoratus
ENSBTAG00000000632	RAD54B	82	68.767	ENSLACG00000000859	-	100	68.767	Latimeria_chalumnae
ENSBTAG00000000632	RAD54B	99	58.679	ENSLOCG00000010100	rad54b	96	63.248	Lepisosteus_oculatus
ENSBTAG00000000632	RAD54B	89	85.025	ENSLAFG00000015315	-	100	85.025	Loxodonta_africana
ENSBTAG00000000632	RAD54B	99	85.132	ENSMFAG00000031629	-	99	88.122	Macaca_fascicularis
ENSBTAG00000000632	RAD54B	99	85.132	ENSMMUG00000005659	-	99	85.132	Macaca_mulatta
ENSBTAG00000000632	RAD54B	99	85.132	ENSMNEG00000016408	-	99	85.132	Macaca_nemestrina
ENSBTAG00000000632	RAD54B	99	85.352	ENSMLEG00000006946	-	99	85.352	Mandrillus_leucophaeus
ENSBTAG00000000632	RAD54B	99	54.957	ENSMAMG00000012269	rad54b	99	54.957	Mastacembelus_armatus
ENSBTAG00000000632	RAD54B	99	54.545	ENSMZEG00005005281	rad54b	95	59.975	Maylandia_zebra
ENSBTAG00000000632	RAD54B	99	66.667	ENSMGAG00000012024	-	99	66.667	Meleagris_gallopavo
ENSBTAG00000000632	RAD54B	100	76.509	ENSMAUG00000013586	Rad54b	100	76.509	Mesocricetus_auratus
ENSBTAG00000000632	RAD54B	99	82.508	ENSMICG00000000754	-	99	82.508	Microcebus_murinus
ENSBTAG00000000632	RAD54B	100	74.890	ENSMOCG00000020035	Rad54b	99	74.890	Microtus_ochrogaster
ENSBTAG00000000632	RAD54B	99	54.407	ENSMMOG00000003394	rad54b	99	54.407	Mola_mola
ENSBTAG00000000632	RAD54B	88	77.086	ENSMODG00000007343	-	99	77.086	Monodelphis_domestica
ENSBTAG00000000632	RAD54B	71	60.124	ENSMALG00000001520	rad54b	99	60.031	Monopterus_albus
ENSBTAG00000000632	RAD54B	100	76.206	MGP_CAROLIEiJ_G0025810	Rad54b	100	76.206	Mus_caroli
ENSBTAG00000000632	RAD54B	100	76.070	ENSMUSG00000078773	Rad54b	100	76.070	Mus_musculus
ENSBTAG00000000632	RAD54B	100	76.729	MGP_PahariEiJ_G0023933	Rad54b	100	76.729	Mus_pahari
ENSBTAG00000000632	RAD54B	100	76.509	MGP_SPRETEiJ_G0026758	Rad54b	100	76.509	Mus_spretus
ENSBTAG00000000632	RAD54B	89	88.889	ENSMPUG00000008878	-	100	88.889	Mustela_putorius_furo
ENSBTAG00000000632	RAD54B	99	84.303	ENSMLUG00000008953	-	99	84.303	Myotis_lucifugus
ENSBTAG00000000632	RAD54B	100	80.916	ENSNGAG00000017537	Rad54b	100	80.916	Nannospalax_galili
ENSBTAG00000000632	RAD54B	86	59.975	ENSNBRG00000013394	rad54b	92	59.975	Neolamprologus_brichardi
ENSBTAG00000000632	RAD54B	99	86.029	ENSNLEG00000003062	-	99	88.828	Nomascus_leucogenys
ENSBTAG00000000632	RAD54B	71	72.886	ENSMEUG00000012426	-	71	72.886	Notamacropus_eugenii
ENSBTAG00000000632	RAD54B	89	77.819	ENSODEG00000002650	-	96	83.975	Octodon_degus
ENSBTAG00000000632	RAD54B	100	80.659	ENSODEG00000019564	-	100	80.659	Octodon_degus
ENSBTAG00000000632	RAD54B	99	55.032	ENSONIG00000006067	rad54b	99	55.032	Oreochromis_niloticus
ENSBTAG00000000632	RAD54B	83	75.963	ENSOANG00000011348	-	100	75.963	Ornithorhynchus_anatinus
ENSBTAG00000000632	RAD54B	100	82.547	ENSOCUG00000016478	-	99	82.547	Oryctolagus_cuniculus
ENSBTAG00000000632	RAD54B	99	54.822	ENSORLG00000008918	rad54b	99	62.751	Oryzias_latipes
ENSBTAG00000000632	RAD54B	71	62.751	ENSORLG00020012171	rad54b	99	62.751	Oryzias_latipes_hni
ENSBTAG00000000632	RAD54B	99	55.068	ENSORLG00015018536	rad54b	99	55.068	Oryzias_latipes_hsok
ENSBTAG00000000632	RAD54B	84	60.853	ENSOMEG00000004345	rad54b	99	60.853	Oryzias_melastigma
ENSBTAG00000000632	RAD54B	99	82.857	ENSOGAG00000007854	-	99	82.857	Otolemur_garnettii
ENSBTAG00000000632	RAD54B	89	96.917	ENSOARG00000007691	-	100	96.917	Ovis_aries
ENSBTAG00000000632	RAD54B	99	84.048	ENSPPAG00000029572	-	99	84.048	Pan_paniscus
ENSBTAG00000000632	RAD54B	100	87.377	ENSPPRG00000007571	-	100	90.634	Panthera_pardus
ENSBTAG00000000632	RAD54B	80	90.496	ENSPTIG00000012670	-	100	90.496	Panthera_tigris_altaica
ENSBTAG00000000632	RAD54B	99	85.589	ENSPTRG00000020427	-	99	88.552	Pan_troglodytes
ENSBTAG00000000632	RAD54B	99	85.463	ENSPANG00000019566	-	99	85.463	Papio_anubis
ENSBTAG00000000632	RAD54B	99	57.284	ENSPKIG00000014974	rad54b	99	57.284	Paramormyrops_kingsleyae
ENSBTAG00000000632	RAD54B	99	67.391	ENSPSIG00000002383	-	98	73.225	Pelodiscus_sinensis
ENSBTAG00000000632	RAD54B	100	77.193	ENSPEMG00000012133	Rad54b	100	77.193	Peromyscus_maniculatus_bairdii
ENSBTAG00000000632	RAD54B	87	57.640	ENSPMAG00000002916	rad54b	99	58.012	Petromyzon_marinus
ENSBTAG00000000632	RAD54B	89	76.952	ENSPCIG00000020151	-	94	77.029	Phascolarctos_cinereus
ENSBTAG00000000632	RAD54B	99	56.064	ENSPFOG00000023411	rad54b	99	56.064	Poecilia_formosa
ENSBTAG00000000632	RAD54B	99	56.064	ENSPLAG00000010430	rad54b	99	56.064	Poecilia_latipinna
ENSBTAG00000000632	RAD54B	99	56.064	ENSPMEG00000016873	rad54b	99	56.064	Poecilia_mexicana
ENSBTAG00000000632	RAD54B	99	56.736	ENSPREG00000018443	rad54b	99	56.736	Poecilia_reticulata
ENSBTAG00000000632	RAD54B	99	85.589	ENSPPYG00000018750	-	99	85.589	Pongo_abelii
ENSBTAG00000000632	RAD54B	99	86.264	ENSPCOG00000026845	-	99	88.690	Propithecus_coquereli
ENSBTAG00000000632	RAD54B	88	89.218	ENSPVAG00000000261	-	92	89.218	Pteropus_vampyrus
ENSBTAG00000000632	RAD54B	87	59.521	ENSPNYG00000018303	rad54b	96	59.521	Pundamilia_nyererei
ENSBTAG00000000632	RAD54B	99	53.706	ENSPNAG00000000295	rad54b	99	53.706	Pygocentrus_nattereri
ENSBTAG00000000632	RAD54B	100	73.875	ENSRNOG00000039949	Rad54b	100	73.875	Rattus_norvegicus
ENSBTAG00000000632	RAD54B	99	85.132	ENSRBIG00000020419	-	99	85.132	Rhinopithecus_bieti
ENSBTAG00000000632	RAD54B	99	85.132	ENSRROG00000039897	-	99	85.132	Rhinopithecus_roxellana
ENSBTAG00000000632	RAD54B	82	36.752	YBR073W	RDH54	82	37.150	Saccharomyces_cerevisiae
ENSBTAG00000000632	RAD54B	99	84.048	ENSSBOG00000028501	-	99	84.048	Saimiri_boliviensis_boliviensis
ENSBTAG00000000632	RAD54B	99	72.777	ENSSHAG00000017038	-	99	72.777	Sarcophilus_harrisii
ENSBTAG00000000632	RAD54B	65	64.736	ENSSFOG00015008483	rad54b	91	64.736	Scleropages_formosus
ENSBTAG00000000632	RAD54B	86	59.422	ENSSMAG00000018659	rad54b	99	54.198	Scophthalmus_maximus
ENSBTAG00000000632	RAD54B	99	53.518	ENSSDUG00000001122	rad54b	98	53.887	Seriola_dumerili
ENSBTAG00000000632	RAD54B	99	53.376	ENSSLDG00000013787	rad54b	99	53.741	Seriola_lalandi_dorsalis
ENSBTAG00000000632	RAD54B	99	67.432	ENSSPUG00000016497	-	99	67.432	Sphenodon_punctatus
ENSBTAG00000000632	RAD54B	99	55.277	ENSSPAG00000012800	rad54b	99	55.277	Stegastes_partitus
ENSBTAG00000000632	RAD54B	99	87.225	ENSSSCG00000006101	-	99	89.975	Sus_scrofa
ENSBTAG00000000632	RAD54B	99	67.101	ENSTGUG00000011880	-	99	67.101	Taeniopygia_guttata
ENSBTAG00000000632	RAD54B	99	53.723	ENSTRUG00000010015	rad54b	99	53.895	Takifugu_rubripes
ENSBTAG00000000632	RAD54B	100	87.349	ENSTTRG00000006312	-	100	87.349	Tursiops_truncatus
ENSBTAG00000000632	RAD54B	100	87.706	ENSUMAG00000016401	-	100	87.706	Ursus_maritimus
ENSBTAG00000000632	RAD54B	100	87.239	ENSVPAG00000003157	-	100	87.239	Vicugna_pacos
ENSBTAG00000000632	RAD54B	99	54.665	ENSXETG00000025924	rad54b	99	59.102	Xenopus_tropicalis
ENSBTAG00000000632	RAD54B	99	56.079	ENSXMAG00000013141	rad54b	99	56.079	Xiphophorus_maculatus