EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSBTAG00000000678 (Gene tree)
Gene ID
513993
Gene Symbol
CSDE1
Alias
-
Full Name
Bos taurus cold shock domain containing E1 (CSDE1)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
35801 bases
Position
chr3:28579009-28614809
Accession
NM_001098025
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000000901CSDPF00313.223.7e-8515
ENSBTAP00000000901CSDPF00313.223.7e-8525
ENSBTAP00000000901CSDPF00313.223.7e-8535
ENSBTAP00000000901CSDPF00313.223.7e-8545
ENSBTAP00000000901CSDPF00313.223.7e-8555
ENSBTAP00000072412CSDPF00313.221.4e-8415
ENSBTAP00000072412CSDPF00313.221.4e-8425
ENSBTAP00000072412CSDPF00313.221.4e-8435
ENSBTAP00000072412CSDPF00313.221.4e-8445
ENSBTAP00000072412CSDPF00313.221.4e-8455
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000000901-3854XM_005204027ENSBTAP00000000901767 (aa)XP_005204084F1MS94
ENSBTAT00000072611-3421-ENSBTAP00000072412844 (aa)XP_005204081UPI0000EBC558
Gene Model
Click here to download ENSBTAG00000000678's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000678's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000000678CSDE110098.827ENSG00000009307CSDE1100100.000Homo_sapiens
ENSBTAG00000000678CSDE110077.273ENSAPOG00000015538csde110077.273Acanthochromis_polyacanthus
ENSBTAG00000000678CSDE110097.784ENSAMEG00000017129CSDE110093.964Ailuropoda_melanoleuca
ENSBTAG00000000678CSDE19076.486ENSACIG00000015175csde110076.486Amphilophus_citrinellus
ENSBTAG00000000678CSDE110077.403ENSAOCG00000011510csde110077.403Amphiprion_ocellaris
ENSBTAG00000000678CSDE110077.403ENSAPEG00000007194csde110077.403Amphiprion_percula
ENSBTAG00000000678CSDE110077.143ENSATEG00000003864csde110077.143Anabas_testudineus
ENSBTAG00000000678CSDE110091.525ENSAPLG00000008797CSDE110091.525Anas_platyrhynchos
ENSBTAG00000000678CSDE110087.970ENSACAG00000003120CSDE110091.855Anolis_carolinensis
ENSBTAG00000000678CSDE110098.566ENSANAG00000024665CSDE110098.460Aotus_nancymaae
ENSBTAG00000000678CSDE19372.340ENSANAG00000028396-9173.129Aotus_nancymaae
ENSBTAG00000000678CSDE110077.113ENSACLG00000013296csde110077.113Astatotilapia_calliptera
ENSBTAG00000000678CSDE110076.913ENSAMXG00000007436csde110076.913Astyanax_mexicanus
ENSBTAG00000000678CSDE110098.578ENSCJAG00000012565CSDE110098.578Callithrix_jacchus
ENSBTAG00000000678CSDE19898.670ENSCAFG00000009618CSDE110095.054Canis_familiaris
ENSBTAG00000000678CSDE110098.696ENSCAFG00020000481CSDE110098.696Canis_lupus_dingo
ENSBTAG00000000678CSDE110099.739ENSCHIG00000017250CSDE110099.739Capra_hircus
ENSBTAG00000000678CSDE110098.305ENSTSYG00000003747CSDE110098.371Carlito_syrichta
ENSBTAG00000000678CSDE19581.726ENSCAPG00000015128CSDE110081.726Cavia_aperea
ENSBTAG00000000678CSDE110091.762ENSCPOG00000040388CSDE110092.982Cavia_porcellus
ENSBTAG00000000678CSDE19673.719ENSCCAG00000030878-9173.719Cebus_capucinus
ENSBTAG00000000678CSDE110098.578ENSCCAG00000036794CSDE110098.622Cebus_capucinus
ENSBTAG00000000678CSDE19576.485ENSCCAG00000033677-9976.010Cebus_capucinus
ENSBTAG00000000678CSDE110098.827ENSCATG00000036962CSDE110098.815Cercocebus_atys
ENSBTAG00000000678CSDE110098.305ENSCLAG00000006618CSDE110098.371Chinchilla_lanigera
ENSBTAG00000000678CSDE110098.815ENSCSAG00000001658CSDE110098.815Chlorocebus_sabaeus
ENSBTAG00000000678CSDE110098.466ENSCHOG00000000918CSDE19198.466Choloepus_hoffmanni
ENSBTAG00000000678CSDE110091.917ENSCPBG00000016547CSDE110092.231Chrysemys_picta_bellii
ENSBTAG00000000678CSDE19741.963ENSCING00000014465-9643.049Ciona_intestinalis
ENSBTAG00000000678CSDE19642.222ENSCSAVG00000008100-9842.627Ciona_savignyi
ENSBTAG00000000678CSDE110098.827ENSCANG00000035096CSDE110098.697Colobus_angolensis_palliatus
ENSBTAG00000000678CSDE19992.505ENSCANG00000031069-10092.505Colobus_angolensis_palliatus
ENSBTAG00000000678CSDE110098.044ENSCGRG00001016833-10098.120Cricetulus_griseus_chok1gshd
ENSBTAG00000000678CSDE110080.834ENSCGRG00001014011-10080.834Cricetulus_griseus_chok1gshd
ENSBTAG00000000678CSDE110083.043ENSCGRG00000005831-10083.043Cricetulus_griseus_crigri
ENSBTAG00000000678CSDE19698.441ENSCGRG00000002225-10098.441Cricetulus_griseus_crigri
ENSBTAG00000000678CSDE110076.983ENSCSEG00000002620csde110076.983Cynoglossus_semilaevis
ENSBTAG00000000678CSDE110076.364ENSCVAG00000001344csde110076.364Cyprinodon_variegatus
ENSBTAG00000000678CSDE110074.969ENSDARG00000074758csde110077.528Danio_rerio
ENSBTAG00000000678CSDE110097.917ENSDNOG00000010287-9397.917Dasypus_novemcinctus
ENSBTAG00000000678CSDE18069.962ENSDNOG00000034464-10073.913Dasypus_novemcinctus
ENSBTAG00000000678CSDE19997.754ENSDORG00000011609Csde110097.754Dipodomys_ordii
ENSBTAG00000000678CSDE19747.951FBgn0263352Unr7348.795Drosophila_melanogaster
ENSBTAG00000000678CSDE19498.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSBTAG00000000678CSDE17968.377ENSETEG00000007109-9968.377Echinops_telfairi
ENSBTAG00000000678CSDE19086.867ENSETEG00000006280-10086.867Echinops_telfairi
ENSBTAG00000000678CSDE19976.762ENSETEG00000013678-9976.762Echinops_telfairi
ENSBTAG00000000678CSDE19954.433ENSEBUG00000008647csde19954.286Eptatretus_burgeri
ENSBTAG00000000678CSDE110098.696ENSEASG00005006284CSDE110098.747Equus_asinus_asinus
ENSBTAG00000000678CSDE110098.696ENSECAG00000020885CSDE110098.747Equus_caballus
ENSBTAG00000000678CSDE19398.429ENSEEUG00000006286CSDE17498.429Erinaceus_europaeus
ENSBTAG00000000678CSDE110075.420ENSELUG00000015507csde110075.420Esox_lucius
ENSBTAG00000000678CSDE110099.052ENSFCAG00000029266CSDE110099.052Felis_catus
ENSBTAG00000000678CSDE110087.594ENSFALG00000003407CSDE110091.479Ficedula_albicollis
ENSBTAG00000000678CSDE19998.204ENSFDAG00000007882CSDE110098.204Fukomys_damarensis
ENSBTAG00000000678CSDE19877.056ENSFHEG00000010799csde110076.654Fundulus_heteroclitus
ENSBTAG00000000678CSDE19974.028ENSGMOG00000012731csde110076.596Gadus_morhua
ENSBTAG00000000678CSDE19887.724ENSGALG00000002139CSDE19891.688Gallus_gallus
ENSBTAG00000000678CSDE19275.915ENSGAFG00000005241csde19575.915Gambusia_affinis
ENSBTAG00000000678CSDE19974.687ENSGACG00000004544csde110077.250Gasterosteus_aculeatus
ENSBTAG00000000678CSDE110091.656ENSGAGG00000017685CSDE110091.980Gopherus_agassizii
ENSBTAG00000000678CSDE110098.827ENSGGOG00000002164CSDE110098.827Gorilla_gorilla
ENSBTAG00000000678CSDE110077.113ENSHBUG00000020315csde110077.113Haplochromis_burtoni
ENSBTAG00000000678CSDE110089.179ENSHGLG00000003829-10089.179Heterocephalus_glaber_female
ENSBTAG00000000678CSDE19985.151ENSHGLG00000007471-9885.151Heterocephalus_glaber_female
ENSBTAG00000000678CSDE19975.910ENSHGLG00000000650-9979.799Heterocephalus_glaber_female
ENSBTAG00000000678CSDE19988.772ENSHGLG00000008555-10088.772Heterocephalus_glaber_female
ENSBTAG00000000678CSDE110088.266ENSHGLG00000009620-10088.972Heterocephalus_glaber_female
ENSBTAG00000000678CSDE110079.672ENSHGLG00000019549-10081.830Heterocephalus_glaber_female
ENSBTAG00000000678CSDE19689.755ENSHGLG00000010039-10089.755Heterocephalus_glaber_female
ENSBTAG00000000678CSDE110084.224ENSHGLG00100012072-10084.224Heterocephalus_glaber_male
ENSBTAG00000000678CSDE19689.532ENSHGLG00100006910-10089.532Heterocephalus_glaber_male
ENSBTAG00000000678CSDE19682.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSBTAG00000000678CSDE110079.688ENSHGLG00100001846-10079.688Heterocephalus_glaber_male
ENSBTAG00000000678CSDE19982.523ENSHGLG00100007287-9882.523Heterocephalus_glaber_male
ENSBTAG00000000678CSDE19980.350ENSHGLG00100002245-9984.105Heterocephalus_glaber_male
ENSBTAG00000000678CSDE19383.543ENSHGLG00100004195-10083.543Heterocephalus_glaber_male
ENSBTAG00000000678CSDE110098.305ENSHGLG00100019438-10098.371Heterocephalus_glaber_male
ENSBTAG00000000678CSDE110076.073ENSHCOG00000004158csde110076.073Hippocampus_comes
ENSBTAG00000000678CSDE110076.524ENSIPUG00000000355csde110076.524Ictalurus_punctatus
ENSBTAG00000000678CSDE110080.307ENSSTOG00000030994-10080.307Ictidomys_tridecemlineatus
ENSBTAG00000000678CSDE18481.653ENSSTOG00000032722-9881.653Ictidomys_tridecemlineatus
ENSBTAG00000000678CSDE19997.904ENSJJAG00000019571Csde110097.904Jaculus_jaculus
ENSBTAG00000000678CSDE110074.097ENSKMAG00000005685csde110076.143Kryptolebias_marmoratus
ENSBTAG00000000678CSDE110077.532ENSLBEG00000014770csde110077.532Labrus_bergylta
ENSBTAG00000000678CSDE19778.718ENSLACG00000018452CSDE19678.928Latimeria_chalumnae
ENSBTAG00000000678CSDE110077.582ENSLOCG00000010413csde19679.828Lepisosteus_oculatus
ENSBTAG00000000678CSDE110097.132ENSLAFG00000007150CSDE19697.132Loxodonta_africana
ENSBTAG00000000678CSDE110098.827ENSMFAG00000003674CSDE110098.827Macaca_fascicularis
ENSBTAG00000000678CSDE110098.827ENSMMUG00000001974CSDE110098.827Macaca_mulatta
ENSBTAG00000000678CSDE110098.827ENSMNEG00000045247CSDE110098.815Macaca_nemestrina
ENSBTAG00000000678CSDE110098.578ENSMLEG00000038673CSDE110098.578Mandrillus_leucophaeus
ENSBTAG00000000678CSDE110078.052ENSMAMG00000008821csde110078.052Mastacembelus_armatus
ENSBTAG00000000678CSDE110077.113ENSMZEG00005021675csde110077.113Maylandia_zebra
ENSBTAG00000000678CSDE110091.406ENSMGAG00000016381CSDE110091.406Meleagris_gallopavo
ENSBTAG00000000678CSDE19998.204ENSMAUG00000014031Csde110098.204Mesocricetus_auratus
ENSBTAG00000000678CSDE110098.044ENSMICG00000002050CSDE110097.986Microcebus_murinus
ENSBTAG00000000678CSDE110098.044ENSMOCG00000018960Csde110098.120Microtus_ochrogaster
ENSBTAG00000000678CSDE110077.662ENSMMOG00000015075csde110077.662Mola_mola
ENSBTAG00000000678CSDE110094.798ENSMODG00000004685CSDE110095.739Monodelphis_domestica
ENSBTAG00000000678CSDE110077.532ENSMALG00000007132csde110077.532Monopterus_albus
ENSBTAG00000000678CSDE110097.784MGP_CAROLIEiJ_G0025444Csde110097.870Mus_caroli
ENSBTAG00000000678CSDE110097.914ENSMUSG00000068823Csde110098.054Mus_musculus
ENSBTAG00000000678CSDE110098.175MGP_PahariEiJ_G0026888Csde110098.246Mus_pahari
ENSBTAG00000000678CSDE110098.175MGP_SPRETEiJ_G0026394Csde110098.246Mus_spretus
ENSBTAG00000000678CSDE19895.019ENSMPUG00000005753CSDE19998.978Mustela_putorius_furo
ENSBTAG00000000678CSDE110098.044ENSMLUG00000005681CSDE110094.194Myotis_lucifugus
ENSBTAG00000000678CSDE19671.047ENSNGAG00000012599-10071.047Nannospalax_galili
ENSBTAG00000000678CSDE19998.054ENSNGAG00000021929Csde110098.054Nannospalax_galili
ENSBTAG00000000678CSDE110077.113ENSNBRG00000020808csde110077.113Neolamprologus_brichardi
ENSBTAG00000000678CSDE110098.697ENSNLEG00000004842CSDE110098.697Nomascus_leucogenys
ENSBTAG00000000678CSDE19397.087ENSMEUG00000002677CSDE19697.087Notamacropus_eugenii
ENSBTAG00000000678CSDE19896.644ENSOPRG00000005002CSDE18296.644Ochotona_princeps
ENSBTAG00000000678CSDE19667.920ENSODEG00000005979-9867.920Octodon_degus
ENSBTAG00000000678CSDE19997.904ENSODEG00000007383-10097.995Octodon_degus
ENSBTAG00000000678CSDE110072.583ENSONIG00000009309csde110074.969Oreochromis_niloticus
ENSBTAG00000000678CSDE110075.686ENSOANG00000003346-10079.551Ornithorhynchus_anatinus
ENSBTAG00000000678CSDE110098.305ENSOCUG00000016438CSDE110097.986Oryctolagus_cuniculus
ENSBTAG00000000678CSDE110077.763ENSORLG00000000707csde110077.763Oryzias_latipes
ENSBTAG00000000678CSDE110074.812ENSORLG00020005148csde110075.458Oryzias_latipes_hni
ENSBTAG00000000678CSDE110077.763ENSORLG00015019415csde110077.763Oryzias_latipes_hsok
ENSBTAG00000000678CSDE110078.442ENSOMEG00000015656csde110078.442Oryzias_melastigma
ENSBTAG00000000678CSDE110098.696ENSOGAG00000012127CSDE110094.787Otolemur_garnettii
ENSBTAG00000000678CSDE110099.870ENSOARG00000020034CSDE110096.090Ovis_aries
ENSBTAG00000000678CSDE110098.827ENSPPAG00000025861CSDE110098.827Pan_paniscus
ENSBTAG00000000678CSDE110099.052ENSPPRG00000006747CSDE110099.052Panthera_pardus
ENSBTAG00000000678CSDE110099.052ENSPTIG00000015468CSDE110099.052Panthera_tigris_altaica
ENSBTAG00000000678CSDE110098.827ENSPTRG00000033721CSDE110098.872Pan_troglodytes
ENSBTAG00000000678CSDE110098.827ENSPANG00000018873CSDE110098.827Papio_anubis
ENSBTAG00000000678CSDE110076.723ENSPKIG00000009459csde110076.723Paramormyrops_kingsleyae
ENSBTAG00000000678CSDE19195.354ENSPSIG00000003823CSDE19695.354Pelodiscus_sinensis
ENSBTAG00000000678CSDE110077.403ENSPMGG00000000772csde110077.403Periophthalmus_magnuspinnatus
ENSBTAG00000000678CSDE19998.503ENSPEMG00000020357-10098.503Peromyscus_maniculatus_bairdii
ENSBTAG00000000678CSDE110093.979ENSPCIG00000022587CSDE110095.865Phascolarctos_cinereus
ENSBTAG00000000678CSDE19974.845ENSPFOG00000012664csde110075.155Poecilia_formosa
ENSBTAG00000000678CSDE19770.661ENSPLAG00000017680csde19370.661Poecilia_latipinna
ENSBTAG00000000678CSDE19870.561ENSPMEG00000005094csde19670.561Poecilia_mexicana
ENSBTAG00000000678CSDE110073.192ENSPREG00000011631csde110073.589Poecilia_reticulata
ENSBTAG00000000678CSDE110094.862ENSPPYG00000000996CSDE110098.747Pongo_abelii
ENSBTAG00000000678CSDE110097.940ENSPCAG00000014368CSDE19697.940Procavia_capensis
ENSBTAG00000000678CSDE19083.209ENSPCOG00000008223-9083.209Propithecus_coquereli
ENSBTAG00000000678CSDE110098.566ENSPCOG00000017893CSDE110098.566Propithecus_coquereli
ENSBTAG00000000678CSDE110092.438ENSPVAG00000008225CSDE110088.863Pteropus_vampyrus
ENSBTAG00000000678CSDE110077.113ENSPNYG00000013745csde110077.113Pundamilia_nyererei
ENSBTAG00000000678CSDE110077.273ENSPNAG00000001958csde110077.273Pygocentrus_nattereri
ENSBTAG00000000678CSDE110094.486ENSRNOG00000061058Csde110098.371Rattus_norvegicus
ENSBTAG00000000678CSDE110093.254ENSRBIG00000038966-10093.254Rhinopithecus_bieti
ENSBTAG00000000678CSDE110095.052ENSRBIG00000038088-9997.235Rhinopithecus_bieti
ENSBTAG00000000678CSDE110098.827ENSRROG00000043101CSDE110098.815Rhinopithecus_roxellana
ENSBTAG00000000678CSDE110098.578ENSSBOG00000035592CSDE110098.578Saimiri_boliviensis_boliviensis
ENSBTAG00000000678CSDE110095.567ENSSHAG00000009831CSDE110095.567Sarcophilus_harrisii
ENSBTAG00000000678CSDE110076.853ENSSFOG00015007498csde110076.853Scleropages_formosus
ENSBTAG00000000678CSDE110077.922ENSSMAG00000007203csde110077.922Scophthalmus_maximus
ENSBTAG00000000678CSDE110077.403ENSSDUG00000015380csde110077.403Seriola_dumerili
ENSBTAG00000000678CSDE110077.403ENSSLDG00000008819csde110077.403Seriola_lalandi_dorsalis
ENSBTAG00000000678CSDE110097.653ENSSARG00000000738CSDE110093.136Sorex_araneus
ENSBTAG00000000678CSDE110091.265ENSSPUG00000008714CSDE110091.604Sphenodon_punctatus
ENSBTAG00000000678CSDE110077.273ENSSPAG00000000716csde110077.273Stegastes_partitus
ENSBTAG00000000678CSDE110098.957ENSSSCG00000006752CSDE110098.957Sus_scrofa
ENSBTAG00000000678CSDE110086.625ENSTGUG00000000972CSDE110090.500Taeniopygia_guttata
ENSBTAG00000000678CSDE110074.382ENSTRUG00000007996csde110074.382Takifugu_rubripes
ENSBTAG00000000678CSDE18880.989ENSTNIG00000010878csde110080.989Tetraodon_nigroviridis
ENSBTAG00000000678CSDE19398.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSBTAG00000000678CSDE110098.696ENSTTRG00000015583CSDE110095.024Tursiops_truncatus
ENSBTAG00000000678CSDE18999.035ENSUAMG00000021779-10099.035Ursus_americanus
ENSBTAG00000000678CSDE18994.042ENSUAMG00000024289-9994.042Ursus_americanus
ENSBTAG00000000678CSDE110091.134ENSUMAG00000009720-9791.134Ursus_maritimus
ENSBTAG00000000678CSDE19299.050ENSUMAG00000011714-9999.050Ursus_maritimus
ENSBTAG00000000678CSDE110098.131ENSVPAG00000000749CSDE18597.653Vicugna_pacos
ENSBTAG00000000678CSDE18698.538ENSVVUG00000009890CSDE19498.538Vulpes_vulpes
ENSBTAG00000000678CSDE110082.147ENSXETG00000021448csde110085.768Xenopus_tropicalis
ENSBTAG00000000678CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSBTAG00000000678CSDE19877.321ENSXMAG00000009080csde19877.321Xiphophorus_maculatus

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