EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000000687 (Gene tree)
Gene ID: 525136
Gene Symbol: POC1B
Alias: -
Full Name: Bos taurus POC1 centriolar protein B (POC1B)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 104626 bases
Position: chr5:19295432-19400057
Accession: NM_001099031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000070972	eIF2A	PF08662.11	9.9e-10	1	1
ENSBTAP00000067578	eIF2A	PF08662.11	6.1e-09	1	1
ENSBTAP00000000919	eIF2A	PF08662.11	7.7e-09	1	1
ENSBTAP00000060880	eIF2A	PF08662.11	6.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000079434	-	1616	-	ENSBTAP00000067578	451 (aa)	XP_005206113	UPI000383D8B1
ENSBTAT00000076347	-	1954	-	ENSBTAP00000060880	448 (aa)	-	UPI0007603AB4
ENSBTAT00000000919	-	2522	-	ENSBTAP00000000919	478 (aa)	-	A5PKH9
ENSBTAT00000067805	-	1628	-	ENSBTAP00000070972	455 (aa)	-	UPI000384095F

Gene Model

Click here to download ENSBTAG00000000687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000000687	POC1B	64	30.508	ENSBTAG00000019937	WDR3	52	30.508
ENSBTAG00000000687	POC1B	63	30.047	ENSBTAG00000016791	PEX7	89	30.332
ENSBTAG00000000687	POC1B	66	32.171	ENSBTAG00000047031	WDR5	88	36.364
ENSBTAG00000000687	POC1B	63	33.051	ENSBTAG00000004571	PRPF4	56	33.051
ENSBTAG00000000687	POC1B	98	60.870	ENSBTAG00000001471	POC1A	98	63.014
ENSBTAG00000000687	POC1B	65	31.646	ENSBTAG00000014366	PRPF19	56	30.126
ENSBTAG00000000687	POC1B	67	33.721	ENSBTAG00000054326	WDR5B	85	34.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000687	POC1B	99	90.490	ENSG00000139323	POC1B	99	90.490	Homo_sapiens
ENSBTAG00000000687	POC1B	99	90.583	ENSAMEG00000001812	POC1B	99	90.807	Ailuropoda_melanoleuca
ENSBTAG00000000687	POC1B	99	90.112	ENSANAG00000023816	POC1B	99	90.112	Aotus_nancymaae
ENSBTAG00000000687	POC1B	99	89.663	ENSCJAG00000019637	POC1B	99	89.663	Callithrix_jacchus
ENSBTAG00000000687	POC1B	99	92.809	ENSCAFG00000006105	POC1B	99	92.809	Canis_familiaris
ENSBTAG00000000687	POC1B	99	92.184	ENSCAFG00020016403	POC1B	99	92.184	Canis_lupus_dingo
ENSBTAG00000000687	POC1B	100	97.783	ENSCHIG00000026402	POC1B	100	97.783	Capra_hircus
ENSBTAG00000000687	POC1B	83	83.042	ENSTSYG00000010732	POC1B	90	88.187	Carlito_syrichta
ENSBTAG00000000687	POC1B	97	75.485	ENSCAPG00000015652	POC1B	99	75.485	Cavia_aperea
ENSBTAG00000000687	POC1B	99	84.045	ENSCPOG00000015525	POC1B	99	83.229	Cavia_porcellus
ENSBTAG00000000687	POC1B	99	90.667	ENSCATG00000036201	POC1B	99	90.667	Cercocebus_atys
ENSBTAG00000000687	POC1B	99	87.585	ENSCLAG00000006831	POC1B	99	87.585	Chinchilla_lanigera
ENSBTAG00000000687	POC1B	99	90.444	ENSCSAG00000003775	POC1B	99	90.444	Chlorocebus_sabaeus
ENSBTAG00000000687	POC1B	99	64.399	ENSCPBG00000000137	POC1B	99	64.237	Chrysemys_picta_bellii
ENSBTAG00000000687	POC1B	99	90.000	ENSCANG00000043354	POC1B	99	90.000	Colobus_angolensis_palliatus
ENSBTAG00000000687	POC1B	99	90.519	ENSDNOG00000011916	POC1B	99	90.519	Dasypus_novemcinctus
ENSBTAG00000000687	POC1B	99	87.315	ENSDORG00000013903	Poc1b	99	87.238	Dipodomys_ordii
ENSBTAG00000000687	POC1B	99	92.584	ENSEASG00005019319	POC1B	99	92.453	Equus_asinus_asinus
ENSBTAG00000000687	POC1B	99	93.005	ENSECAG00000013326	POC1B	99	92.243	Equus_caballus
ENSBTAG00000000687	POC1B	99	92.000	ENSFCAG00000007623	POC1B	99	92.000	Felis_catus
ENSBTAG00000000687	POC1B	98	55.882	ENSFALG00000010636	POC1B	93	54.393	Ficedula_albicollis
ENSBTAG00000000687	POC1B	99	89.391	ENSFDAG00000020160	POC1B	99	89.904	Fukomys_damarensis
ENSBTAG00000000687	POC1B	78	70.455	ENSGAGG00000013124	POC1B	99	69.944	Gopherus_agassizii
ENSBTAG00000000687	POC1B	99	90.000	ENSGGOG00000008572	POC1B	99	90.000	Gorilla_gorilla
ENSBTAG00000000687	POC1B	99	88.966	ENSHGLG00000014556	POC1B	99	88.966	Heterocephalus_glaber_female
ENSBTAG00000000687	POC1B	99	88.964	ENSHGLG00100000295	POC1B	99	89.423	Heterocephalus_glaber_male
ENSBTAG00000000687	POC1B	99	87.191	ENSSTOG00000006306	POC1B	99	87.191	Ictidomys_tridecemlineatus
ENSBTAG00000000687	POC1B	99	85.778	ENSJJAG00000013503	Poc1b	99	85.778	Jaculus_jaculus
ENSBTAG00000000687	POC1B	98	58.985	ENSLOCG00000016379	POC1B	97	58.246	Lepisosteus_oculatus
ENSBTAG00000000687	POC1B	99	89.195	ENSLAFG00000017550	POC1B	99	89.195	Loxodonta_africana
ENSBTAG00000000687	POC1B	99	90.444	ENSMFAG00000043490	POC1B	99	90.444	Macaca_fascicularis
ENSBTAG00000000687	POC1B	99	90.444	ENSMNEG00000040128	POC1B	99	90.444	Macaca_nemestrina
ENSBTAG00000000687	POC1B	99	90.444	ENSMLEG00000031700	POC1B	99	90.444	Mandrillus_leucophaeus
ENSBTAG00000000687	POC1B	99	84.222	ENSMOCG00000015822	Poc1b	99	84.222	Microtus_ochrogaster
ENSBTAG00000000687	POC1B	99	72.332	ENSMODG00000009882	POC1B	99	72.530	Monodelphis_domestica
ENSBTAG00000000687	POC1B	99	81.379	MGP_PahariEiJ_G0031323	Poc1b	99	81.379	Mus_pahari
ENSBTAG00000000687	POC1B	99	90.167	ENSMPUG00000007581	POC1B	99	90.377	Mustela_putorius_furo
ENSBTAG00000000687	POC1B	100	89.732	ENSMLUG00000002893	POC1B	99	89.910	Myotis_lucifugus
ENSBTAG00000000687	POC1B	99	85.111	ENSNGAG00000019321	Poc1b	99	85.111	Nannospalax_galili
ENSBTAG00000000687	POC1B	99	89.556	ENSNLEG00000034847	POC1B	99	89.556	Nomascus_leucogenys
ENSBTAG00000000687	POC1B	99	86.712	ENSODEG00000009236	POC1B	99	86.412	Octodon_degus
ENSBTAG00000000687	POC1B	99	67.277	ENSOANG00000006637	POC1B	99	67.277	Ornithorhynchus_anatinus
ENSBTAG00000000687	POC1B	99	90.356	ENSOCUG00000008219	POC1B	99	90.356	Oryctolagus_cuniculus
ENSBTAG00000000687	POC1B	100	97.699	ENSOARG00000015648	POC1B	100	97.699	Ovis_aries
ENSBTAG00000000687	POC1B	99	90.222	ENSPPAG00000030897	POC1B	99	90.222	Pan_paniscus
ENSBTAG00000000687	POC1B	99	92.034	ENSPPRG00000006168	POC1B	99	92.034	Panthera_pardus
ENSBTAG00000000687	POC1B	99	91.494	ENSPTIG00000019536	POC1B	99	91.494	Panthera_tigris_altaica
ENSBTAG00000000687	POC1B	99	90.222	ENSPTRG00000005284	POC1B	99	90.222	Pan_troglodytes
ENSBTAG00000000687	POC1B	99	90.147	ENSPANG00000015875	POC1B	99	90.147	Papio_anubis
ENSBTAG00000000687	POC1B	99	64.407	ENSPSIG00000004298	POC1B	99	64.619	Pelodiscus_sinensis
ENSBTAG00000000687	POC1B	62	87.195	ENSPCIG00000014731	-	84	87.195	Phascolarctos_cinereus
ENSBTAG00000000687	POC1B	99	90.147	ENSPPYG00000004819	POC1B	99	90.147	Pongo_abelii
ENSBTAG00000000687	POC1B	99	68.868	ENSPCAG00000002158	POC1B	99	67.715	Procavia_capensis
ENSBTAG00000000687	POC1B	99	93.291	ENSPVAG00000011562	POC1B	99	93.291	Pteropus_vampyrus
ENSBTAG00000000687	POC1B	99	55.670	ENSPNAG00000026557	POC1B	97	56.584	Pygocentrus_nattereri
ENSBTAG00000000687	POC1B	99	88.667	ENSRBIG00000001080	POC1B	99	88.444	Rhinopithecus_bieti
ENSBTAG00000000687	POC1B	99	90.444	ENSRROG00000044376	POC1B	99	90.444	Rhinopithecus_roxellana
ENSBTAG00000000687	POC1B	99	90.562	ENSSBOG00000023395	POC1B	99	90.562	Saimiri_boliviensis_boliviensis
ENSBTAG00000000687	POC1B	99	79.874	ENSSARG00000010807	POC1B	99	79.874	Sorex_araneus
ENSBTAG00000000687	POC1B	99	94.420	ENSSSCG00000000920	POC1B	99	94.420	Sus_scrofa
ENSBTAG00000000687	POC1B	99	56.278	ENSTGUG00000008063	POC1B	99	55.460	Taeniopygia_guttata
ENSBTAG00000000687	POC1B	98	86.636	ENSTBEG00000014216	POC1B	100	86.636	Tupaia_belangeri
ENSBTAG00000000687	POC1B	99	94.382	ENSTTRG00000002513	POC1B	99	94.130	Tursiops_truncatus
ENSBTAG00000000687	POC1B	99	91.632	ENSUAMG00000006889	POC1B	99	91.841	Ursus_americanus
ENSBTAG00000000687	POC1B	99	91.743	ENSUMAG00000002434	POC1B	99	92.665	Ursus_maritimus
ENSBTAG00000000687	POC1B	83	93.750	ENSVPAG00000001441	POC1B	84	93.750	Vicugna_pacos
ENSBTAG00000000687	POC1B	71	92.784	ENSVVUG00000011627	-	96	92.784	Vulpes_vulpes
ENSBTAG00000000687	POC1B	98	58.051	ENSXETG00000021865	poc1b	96	63.187	Xenopus_tropicalis