EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000000721 (Gene tree)
Gene ID: 518738
Gene Symbol: GPATCH1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 56845 bases
Position: chr18:43488169-43545013
Accession: 29514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000000963	DUF1604	PF07713.13	1.2e-35	1	1
ENSBTAP00000071226	G-patch	PF01585.23	4.9e-07	1	1
ENSBTAP00000000963	G-patch	PF01585.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000000963	-	4193	-	ENSBTAP00000000963	931 (aa)	-	G1K130
ENSBTAT00000071524	-	4032	-	ENSBTAP00000071226	863 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000000721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000721	GPATCH1	100	88.853	ENSG00000076650	GPATCH1	91	89.072	Homo_sapiens
ENSBTAG00000000721	GPATCH1	100	86.803	ENSAMEG00000015575	GPATCH1	91	91.166	Ailuropoda_melanoleuca
ENSBTAG00000000721	GPATCH1	81	70.166	ENSAOCG00000006668	gpatch1	79	70.166	Amphiprion_ocellaris
ENSBTAG00000000721	GPATCH1	81	54.746	ENSAPEG00000000026	gpatch1	90	52.644	Amphiprion_percula
ENSBTAG00000000721	GPATCH1	90	50.685	ENSATEG00000014494	gpatch1	90	50.911	Anabas_testudineus
ENSBTAG00000000721	GPATCH1	90	61.564	ENSAPLG00000007584	GPATCH1	96	60.990	Anas_platyrhynchos
ENSBTAG00000000721	GPATCH1	100	87.889	ENSANAG00000027002	GPATCH1	91	88.132	Aotus_nancymaae
ENSBTAG00000000721	GPATCH1	81	54.082	ENSACLG00000024740	gpatch1	83	54.034	Astatotilapia_calliptera
ENSBTAG00000000721	GPATCH1	91	52.464	ENSAMXG00000020177	gpatch1	97	51.522	Astyanax_mexicanus
ENSBTAG00000000721	GPATCH1	69	30.511	WBGene00011109	R07E5.1	76	30.548	Caenorhabditis_elegans
ENSBTAG00000000721	GPATCH1	100	87.674	ENSCJAG00000000684	GPATCH1	91	87.897	Callithrix_jacchus
ENSBTAG00000000721	GPATCH1	100	85.959	ENSCAFG00000007457	GPATCH1	76	90.118	Canis_familiaris
ENSBTAG00000000721	GPATCH1	94	90.046	ENSCAFG00020019731	GPATCH1	91	90.118	Canis_lupus_dingo
ENSBTAG00000000721	GPATCH1	100	97.100	ENSCHIG00000019626	GPATCH1	100	97.100	Capra_hircus
ENSBTAG00000000721	GPATCH1	97	78.721	ENSCAPG00000008827	GPATCH1	91	79.419	Cavia_aperea
ENSBTAG00000000721	GPATCH1	100	81.497	ENSCPOG00000024477	GPATCH1	91	82.629	Cavia_porcellus
ENSBTAG00000000721	GPATCH1	100	87.339	ENSCCAG00000024676	GPATCH1	91	87.897	Cebus_capucinus
ENSBTAG00000000721	GPATCH1	100	88.532	ENSCATG00000043637	GPATCH1	91	88.719	Cercocebus_atys
ENSBTAG00000000721	GPATCH1	96	82.531	ENSCLAG00000003395	-	92	83.659	Chinchilla_lanigera
ENSBTAG00000000721	GPATCH1	100	86.188	ENSCSAG00000004743	GPATCH1	91	86.134	Chlorocebus_sabaeus
ENSBTAG00000000721	GPATCH1	83	79.118	ENSCHOG00000012865	GPATCH1	89	79.118	Choloepus_hoffmanni
ENSBTAG00000000721	GPATCH1	78	69.168	ENSCPBG00000000666	GPATCH1	92	69.168	Chrysemys_picta_bellii
ENSBTAG00000000721	GPATCH1	68	37.191	ENSCING00000012518	-	90	34.170	Ciona_intestinalis
ENSBTAG00000000721	GPATCH1	90	85.185	ENSCANG00000012540	GPATCH1	90	85.139	Colobus_angolensis_palliatus
ENSBTAG00000000721	GPATCH1	97	80.879	ENSCGRG00001016736	Gpatch1	91	81.741	Cricetulus_griseus_chok1gshd
ENSBTAG00000000721	GPATCH1	89	68.009	ENSCGRG00000005069	Gpatch1	90	68.009	Cricetulus_griseus_crigri
ENSBTAG00000000721	GPATCH1	81	49.170	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSBTAG00000000721	GPATCH1	90	50.165	ENSDARG00000033418	gpatch1	92	50.385	Danio_rerio
ENSBTAG00000000721	GPATCH1	91	86.118	ENSDNOG00000005291	GPATCH1	95	86.118	Dasypus_novemcinctus
ENSBTAG00000000721	GPATCH1	94	78.809	ENSDORG00000012546	Gpatch1	95	79.059	Dipodomys_ordii
ENSBTAG00000000721	GPATCH1	69	33.003	FBgn0036386	CG8833	67	33.381	Drosophila_melanogaster
ENSBTAG00000000721	GPATCH1	99	76.464	ENSETEG00000003626	GPATCH1	92	77.294	Echinops_telfairi
ENSBTAG00000000721	GPATCH1	94	36.973	ENSEBUG00000011286	gpatch1	91	37.557	Eptatretus_burgeri
ENSBTAG00000000721	GPATCH1	91	89.573	ENSEASG00005021162	GPATCH1	93	90.311	Equus_asinus_asinus
ENSBTAG00000000721	GPATCH1	94	90.149	ENSECAG00000022743	GPATCH1	88	90.106	Equus_caballus
ENSBTAG00000000721	GPATCH1	78	78.922	ENSEEUG00000012925	GPATCH1	78	78.922	Erinaceus_europaeus
ENSBTAG00000000721	GPATCH1	100	88.948	ENSFCAG00000014917	GPATCH1	91	89.870	Felis_catus
ENSBTAG00000000721	GPATCH1	99	63.368	ENSFALG00000007821	GPATCH1	89	64.637	Ficedula_albicollis
ENSBTAG00000000721	GPATCH1	96	81.737	ENSFDAG00000003871	GPATCH1	92	81.917	Fukomys_damarensis
ENSBTAG00000000721	GPATCH1	75	51.740	ENSGMOG00000003830	gpatch1	95	51.740	Gadus_morhua
ENSBTAG00000000721	GPATCH1	93	62.883	ENSGALG00000004839	GPATCH1	93	63.604	Gallus_gallus
ENSBTAG00000000721	GPATCH1	81	51.295	ENSGACG00000017544	gpatch1	94	49.190	Gasterosteus_aculeatus
ENSBTAG00000000721	GPATCH1	100	64.465	ENSGAGG00000010067	GPATCH1	91	64.520	Gopherus_agassizii
ENSBTAG00000000721	GPATCH1	98	88.113	ENSGGOG00000010862	GPATCH1	91	88.848	Gorilla_gorilla
ENSBTAG00000000721	GPATCH1	81	54.161	ENSHBUG00000023462	gpatch1	90	51.995	Haplochromis_burtoni
ENSBTAG00000000721	GPATCH1	100	83.405	ENSHGLG00000009334	GPATCH1	91	83.666	Heterocephalus_glaber_female
ENSBTAG00000000721	GPATCH1	100	83.512	ENSHGLG00100018074	GPATCH1	91	83.784	Heterocephalus_glaber_male
ENSBTAG00000000721	GPATCH1	93	51.630	ENSIPUG00000014977	gpatch1	90	52.828	Ictalurus_punctatus
ENSBTAG00000000721	GPATCH1	100	82.101	ENSSTOG00000003720	GPATCH1	91	86.235	Ictidomys_tridecemlineatus
ENSBTAG00000000721	GPATCH1	91	83.746	ENSJJAG00000023765	Gpatch1	91	83.746	Jaculus_jaculus
ENSBTAG00000000721	GPATCH1	90	51.860	ENSKMAG00000017950	gpatch1	89	51.684	Kryptolebias_marmoratus
ENSBTAG00000000721	GPATCH1	81	52.612	ENSLBEG00000026527	gpatch1	88	50.838	Labrus_bergylta
ENSBTAG00000000721	GPATCH1	88	58.894	ENSLACG00000008130	GPATCH1	90	59.184	Latimeria_chalumnae
ENSBTAG00000000721	GPATCH1	82	57.532	ENSLOCG00000001800	gpatch1	90	54.713	Lepisosteus_oculatus
ENSBTAG00000000721	GPATCH1	99	88.248	ENSLAFG00000013589	GPATCH1	94	87.908	Loxodonta_africana
ENSBTAG00000000721	GPATCH1	91	88.208	ENSMFAG00000034418	GPATCH1	96	88.208	Macaca_fascicularis
ENSBTAG00000000721	GPATCH1	100	88.223	ENSMMUG00000011790	GPATCH1	92	88.249	Macaca_mulatta
ENSBTAG00000000721	GPATCH1	100	87.996	ENSMNEG00000045084	GPATCH1	91	88.132	Macaca_nemestrina
ENSBTAG00000000721	GPATCH1	100	77.492	ENSMLEG00000043840	GPATCH1	85	85.331	Mandrillus_leucophaeus
ENSBTAG00000000721	GPATCH1	81	53.954	ENSMZEG00005001926	gpatch1	83	53.790	Maylandia_zebra
ENSBTAG00000000721	GPATCH1	89	64.005	ENSMGAG00000005775	GPATCH1	89	63.995	Meleagris_gallopavo
ENSBTAG00000000721	GPATCH1	90	78.538	ENSMICG00000004829	GPATCH1	93	79.245	Microcebus_murinus
ENSBTAG00000000721	GPATCH1	99	80.301	ENSMOCG00000000174	Gpatch1	92	81.616	Microtus_ochrogaster
ENSBTAG00000000721	GPATCH1	81	50.820	ENSMMOG00000002140	gpatch1	87	51.572	Mola_mola
ENSBTAG00000000721	GPATCH1	91	74.941	ENSMODG00000012226	GPATCH1	90	74.941	Monodelphis_domestica
ENSBTAG00000000721	GPATCH1	99	48.914	ENSMALG00000014386	gpatch1	90	50.573	Monopterus_albus
ENSBTAG00000000721	GPATCH1	100	80.687	ENSMUSG00000063808	Gpatch1	100	95.918	Mus_musculus
ENSBTAG00000000721	GPATCH1	100	82.013	MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	Mus_pahari
ENSBTAG00000000721	GPATCH1	100	81.994	MGP_SPRETEiJ_G0030681	Gpatch1	100	96.939	Mus_spretus
ENSBTAG00000000721	GPATCH1	100	89.807	ENSMPUG00000007658	GPATCH1	91	89.635	Mustela_putorius_furo
ENSBTAG00000000721	GPATCH1	100	89.581	ENSMLUG00000012161	GPATCH1	91	89.399	Myotis_lucifugus
ENSBTAG00000000721	GPATCH1	100	83.136	ENSNGAG00000012455	Gpatch1	91	84.217	Nannospalax_galili
ENSBTAG00000000721	GPATCH1	100	88.317	ENSNLEG00000007659	GPATCH1	91	88.471	Nomascus_leucogenys
ENSBTAG00000000721	GPATCH1	79	67.030	ENSMEUG00000015174	GPATCH1	79	67.030	Notamacropus_eugenii
ENSBTAG00000000721	GPATCH1	99	81.458	ENSODEG00000007103	GPATCH1	91	82.147	Octodon_degus
ENSBTAG00000000721	GPATCH1	82	55.685	ENSONIG00000003302	gpatch1	91	54.108	Oreochromis_niloticus
ENSBTAG00000000721	GPATCH1	99	71.337	ENSOANG00000012732	GPATCH1	91	73.529	Ornithorhynchus_anatinus
ENSBTAG00000000721	GPATCH1	100	83.047	ENSOCUG00000015905	GPATCH1	91	87.750	Oryctolagus_cuniculus
ENSBTAG00000000721	GPATCH1	90	51.415	ENSORLG00000018706	gpatch1	88	51.392	Oryzias_latipes
ENSBTAG00000000721	GPATCH1	90	49.592	ENSOMEG00000022688	gpatch1	90	50.000	Oryzias_melastigma
ENSBTAG00000000721	GPATCH1	85	87.863	ENSOGAG00000004016	GPATCH1	100	87.863	Otolemur_garnettii
ENSBTAG00000000721	GPATCH1	99	96.537	ENSOARG00000004365	GPATCH1	99	96.537	Ovis_aries
ENSBTAG00000000721	GPATCH1	100	88.424	ENSPPAG00000020990	GPATCH1	91	88.471	Pan_paniscus
ENSBTAG00000000721	GPATCH1	100	90.236	ENSPPRG00000017245	GPATCH1	91	90.342	Panthera_pardus
ENSBTAG00000000721	GPATCH1	100	86.481	ENSPTIG00000019649	GPATCH1	91	90.931	Panthera_tigris_altaica
ENSBTAG00000000721	GPATCH1	100	88.532	ENSPTRG00000010803	GPATCH1	91	88.588	Pan_troglodytes
ENSBTAG00000000721	GPATCH1	91	88.367	ENSPANG00000012374	GPATCH1	95	88.367	Papio_anubis
ENSBTAG00000000721	GPATCH1	81	55.527	ENSPKIG00000020745	gpatch1	80	55.569	Paramormyrops_kingsleyae
ENSBTAG00000000721	GPATCH1	100	60.976	ENSPSIG00000013433	GPATCH1	91	64.327	Pelodiscus_sinensis
ENSBTAG00000000721	GPATCH1	100	82.492	ENSPEMG00000000636	Gpatch1	91	83.039	Peromyscus_maniculatus_bairdii
ENSBTAG00000000721	GPATCH1	91	75.118	ENSPCIG00000021003	GPATCH1	95	75.118	Phascolarctos_cinereus
ENSBTAG00000000721	GPATCH1	73	49.356	ENSPREG00000008264	gpatch1	97	44.983	Poecilia_reticulata
ENSBTAG00000000721	GPATCH1	100	85.745	ENSPPYG00000009824	GPATCH1	91	85.529	Pongo_abelii
ENSBTAG00000000721	GPATCH1	83	78.810	ENSPCAG00000005931	GPATCH1	83	78.897	Procavia_capensis
ENSBTAG00000000721	GPATCH1	93	81.703	ENSPCOG00000009674	GPATCH1	97	82.999	Propithecus_coquereli
ENSBTAG00000000721	GPATCH1	83	87.022	ENSPVAG00000017767	GPATCH1	83	87.022	Pteropus_vampyrus
ENSBTAG00000000721	GPATCH1	81	54.499	ENSPNYG00000018189	gpatch1	95	53.791	Pundamilia_nyererei
ENSBTAG00000000721	GPATCH1	90	52.455	ENSPNAG00000013187	gpatch1	90	51.384	Pygocentrus_nattereri
ENSBTAG00000000721	GPATCH1	100	80.043	ENSRNOG00000011584	Gpatch1	91	83.510	Rattus_norvegicus
ENSBTAG00000000721	GPATCH1	100	81.049	ENSRBIG00000034723	GPATCH1	92	81.582	Rhinopithecus_bieti
ENSBTAG00000000721	GPATCH1	100	88.639	ENSRROG00000024428	GPATCH1	91	88.837	Rhinopithecus_roxellana
ENSBTAG00000000721	GPATCH1	100	83.494	ENSSBOG00000034650	GPATCH1	91	88.014	Saimiri_boliviensis_boliviensis
ENSBTAG00000000721	GPATCH1	99	73.712	ENSSHAG00000016016	GPATCH1	90	74.912	Sarcophilus_harrisii
ENSBTAG00000000721	GPATCH1	81	54.140	ENSSFOG00015011535	gpatch1	89	52.018	Scleropages_formosus
ENSBTAG00000000721	GPATCH1	81	49.268	ENSSMAG00000002883	gpatch1	93	47.812	Scophthalmus_maximus
ENSBTAG00000000721	GPATCH1	81	52.434	ENSSDUG00000007444	gpatch1	90	50.000	Seriola_dumerili
ENSBTAG00000000721	GPATCH1	81	52.802	ENSSLDG00000002856	gpatch1	94	52.302	Seriola_lalandi_dorsalis
ENSBTAG00000000721	GPATCH1	72	85.015	ENSSARG00000004108	GPATCH1	72	85.015	Sorex_araneus
ENSBTAG00000000721	GPATCH1	91	92.471	ENSSSCG00000002865	GPATCH1	94	92.471	Sus_scrofa
ENSBTAG00000000721	GPATCH1	99	65.011	ENSTGUG00000009401	GPATCH1	91	64.294	Taeniopygia_guttata
ENSBTAG00000000721	GPATCH1	81	51.309	ENSTRUG00000025081	gpatch1	90	49.706	Takifugu_rubripes
ENSBTAG00000000721	GPATCH1	81	51.309	ENSTRUG00000005785	-	90	49.706	Takifugu_rubripes
ENSBTAG00000000721	GPATCH1	81	52.659	ENSTNIG00000002554	gpatch1	99	53.350	Tetraodon_nigroviridis
ENSBTAG00000000721	GPATCH1	54	94.231	ENSTBEG00000007750	-	66	94.231	Tupaia_belangeri
ENSBTAG00000000721	GPATCH1	91	83.822	ENSTTRG00000012221	GPATCH1	91	83.822	Tursiops_truncatus
ENSBTAG00000000721	GPATCH1	99	85.329	ENSUMAG00000014645	GPATCH1	96	89.826	Ursus_maritimus
ENSBTAG00000000721	GPATCH1	79	97.714	ENSVPAG00000010313	GPATCH1	86	97.826	Vicugna_pacos
ENSBTAG00000000721	GPATCH1	94	90.160	ENSVVUG00000016572	GPATCH1	91	90.235	Vulpes_vulpes
ENSBTAG00000000721	GPATCH1	99	50.839	ENSXETG00000018276	gpatch1	93	53.846	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0006397	mRNA processing	-	IEA	Process