EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000000748 (Gene tree)
Gene ID: 515057
Gene Symbol: GAR1
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 6764 bases
Position: chr6:15597411-15604174
Accession: 29251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000000992	Gar1	PF04410.14	5.6e-39	1	1
ENSBTAP00000063824	Gar1	PF04410.14	5.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000066873	-	648	-	ENSBTAP00000063824	215 (aa)	-	-
ENSBTAT00000000992	-	633	-	ENSBTAP00000000992	210 (aa)	XP_005207660	F1MRF7

Gene Model

Click here to download ENSBTAG00000000748's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000748	GAR1	52	99.083	ENSG00000109534	GAR1	50	99.083	Homo_sapiens
ENSBTAG00000000748	GAR1	68	90.141	ENSAPOG00000019754	gar1	50	94.393	Acanthochromis_polyacanthus
ENSBTAG00000000748	GAR1	52	98.165	ENSAMEG00000004605	GAR1	53	98.165	Ailuropoda_melanoleuca
ENSBTAG00000000748	GAR1	51	94.393	ENSAOCG00000020947	gar1	50	94.393	Amphiprion_ocellaris
ENSBTAG00000000748	GAR1	51	94.393	ENSAPEG00000001676	gar1	50	94.393	Amphiprion_percula
ENSBTAG00000000748	GAR1	51	94.393	ENSATEG00000003733	gar1	50	94.393	Anabas_testudineus
ENSBTAG00000000748	GAR1	50	89.623	ENSAPLG00000010926	GAR1	60	88.889	Anas_platyrhynchos
ENSBTAG00000000748	GAR1	50	91.509	ENSACAG00000010031	GAR1	51	90.741	Anolis_carolinensis
ENSBTAG00000000748	GAR1	52	99.083	ENSANAG00000021608	GAR1	50	99.083	Aotus_nancymaae
ENSBTAG00000000748	GAR1	52	87.273	ENSAMXG00000015752	gar1	71	83.688	Astyanax_mexicanus
ENSBTAG00000000748	GAR1	52	99.083	ENSCJAG00000004041	GAR1	50	99.083	Callithrix_jacchus
ENSBTAG00000000748	GAR1	70	90.604	ENSCAFG00000011503	GAR1	60	90.604	Canis_familiaris
ENSBTAG00000000748	GAR1	88	96.237	ENSCAFG00020015566	GAR1	96	96.237	Canis_lupus_dingo
ENSBTAG00000000748	GAR1	61	93.023	ENSCHIG00000011049	-	70	87.770	Capra_hircus
ENSBTAG00000000748	GAR1	99	99.038	ENSCHIG00000016026	-	100	98.131	Capra_hircus
ENSBTAG00000000748	GAR1	52	99.083	ENSTSYG00000013668	-	51	99.083	Carlito_syrichta
ENSBTAG00000000748	GAR1	72	81.818	ENSTSYG00000026632	-	56	90.826	Carlito_syrichta
ENSBTAG00000000748	GAR1	52	100.000	ENSCPOG00000004216	GAR1	50	100.000	Cavia_porcellus
ENSBTAG00000000748	GAR1	52	99.083	ENSCCAG00000029372	GAR1	50	99.083	Cebus_capucinus
ENSBTAG00000000748	GAR1	52	99.091	ENSCATG00000021854	GAR1	55	99.083	Cercocebus_atys
ENSBTAG00000000748	GAR1	52	98.182	ENSCLAG00000005335	GAR1	96	91.358	Chinchilla_lanigera
ENSBTAG00000000748	GAR1	51	99.065	ENSCSAG00000003922	GAR1	55	99.083	Chlorocebus_sabaeus
ENSBTAG00000000748	GAR1	55	96.552	ENSCHOG00000007484	-	51	96.552	Choloepus_hoffmanni
ENSBTAG00000000748	GAR1	50	92.453	ENSCPBG00000004310	GAR1	55	90.826	Chrysemys_picta_bellii
ENSBTAG00000000748	GAR1	52	98.182	ENSCANG00000039262	GAR1	50	98.165	Colobus_angolensis_palliatus
ENSBTAG00000000748	GAR1	57	83.193	ENSCGRG00000010165	-	83	92.453	Cricetulus_griseus_crigri
ENSBTAG00000000748	GAR1	51	93.458	ENSCVAG00000002103	gar1	51	93.458	Cyprinodon_variegatus
ENSBTAG00000000748	GAR1	51	91.589	ENSDARG00000076526	gar1	50	90.265	Danio_rerio
ENSBTAG00000000748	GAR1	52	98.165	ENSDNOG00000037632	GAR1	55	98.165	Dasypus_novemcinctus
ENSBTAG00000000748	GAR1	53	96.396	ENSDORG00000000482	Gar1	50	96.330	Dipodomys_ordii
ENSBTAG00000000748	GAR1	50	59.615	FBgn0011824	CG4038	73	58.772	Drosophila_melanogaster
ENSBTAG00000000748	GAR1	52	98.182	ENSEASG00005004658	GAR1	50	98.165	Equus_asinus_asinus
ENSBTAG00000000748	GAR1	99	95.714	ENSECAG00000013624	GAR1	97	95.714	Equus_caballus
ENSBTAG00000000748	GAR1	61	63.566	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSBTAG00000000748	GAR1	100	96.682	ENSFCAG00000040791	-	100	96.682	Felis_catus
ENSBTAG00000000748	GAR1	50	92.453	ENSFALG00000006445	GAR1	56	85.950	Ficedula_albicollis
ENSBTAG00000000748	GAR1	53	90.991	ENSFHEG00000008068	gar1	68	84.932	Fundulus_heteroclitus
ENSBTAG00000000748	GAR1	50	93.269	ENSGAGG00000004393	GAR1	55	90.741	Gopherus_agassizii
ENSBTAG00000000748	GAR1	53	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSBTAG00000000748	GAR1	52	98.165	ENSGGOG00000008681	GAR1	50	98.165	Gorilla_gorilla
ENSBTAG00000000748	GAR1	51	98.131	ENSHGLG00000000493	GAR1	72	100.000	Heterocephalus_glaber_female
ENSBTAG00000000748	GAR1	52	90.000	ENSIPUG00000003194	gar1	63	85.714	Ictalurus_punctatus
ENSBTAG00000000748	GAR1	52	96.330	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSBTAG00000000748	GAR1	64	83.212	ENSKMAG00000010402	gar1	67	83.099	Kryptolebias_marmoratus
ENSBTAG00000000748	GAR1	51	92.523	ENSLBEG00000015647	gar1	55	91.150	Labrus_bergylta
ENSBTAG00000000748	GAR1	65	86.607	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSBTAG00000000748	GAR1	51	83.333	ENSMFAG00000003572	-	53	82.569	Macaca_fascicularis
ENSBTAG00000000748	GAR1	52	99.091	ENSMFAG00000024592	GAR1	50	99.083	Macaca_fascicularis
ENSBTAG00000000748	GAR1	52	99.091	ENSMMUG00000021225	GAR1	50	99.083	Macaca_mulatta
ENSBTAG00000000748	GAR1	52	99.091	ENSMNEG00000042594	GAR1	50	99.083	Macaca_nemestrina
ENSBTAG00000000748	GAR1	52	99.091	ENSMLEG00000002496	GAR1	50	99.083	Mandrillus_leucophaeus
ENSBTAG00000000748	GAR1	52	95.413	ENSMAUG00000016788	Gar1	90	84.795	Mesocricetus_auratus
ENSBTAG00000000748	GAR1	67	97.163	ENSMICG00000003326	GAR1	50	98.165	Microcebus_murinus
ENSBTAG00000000748	GAR1	52	95.413	ENSMOCG00000001340	Gar1	81	96.875	Microtus_ochrogaster
ENSBTAG00000000748	GAR1	51	95.327	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSBTAG00000000748	GAR1	51	92.523	ENSMALG00000009672	gar1	50	92.523	Monopterus_albus
ENSBTAG00000000748	GAR1	52	95.413	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSBTAG00000000748	GAR1	52	95.455	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSBTAG00000000748	GAR1	52	97.273	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSBTAG00000000748	GAR1	52	95.455	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSBTAG00000000748	GAR1	100	96.682	ENSMPUG00000008615	GAR1	100	96.682	Mustela_putorius_furo
ENSBTAG00000000748	GAR1	52	99.083	ENSMLUG00000003776	GAR1	100	91.964	Myotis_lucifugus
ENSBTAG00000000748	GAR1	52	97.273	ENSNGAG00000008268	Gar1	71	98.182	Nannospalax_galili
ENSBTAG00000000748	GAR1	53	82.883	ENSNLEG00000034282	-	55	82.569	Nomascus_leucogenys
ENSBTAG00000000748	GAR1	52	99.091	ENSNLEG00000016578	GAR1	50	99.083	Nomascus_leucogenys
ENSBTAG00000000748	GAR1	51	99.065	ENSODEG00000011083	GAR1	56	98.165	Octodon_degus
ENSBTAG00000000748	GAR1	50	95.283	ENSOANG00000003665	GAR1	62	79.137	Ornithorhynchus_anatinus
ENSBTAG00000000748	GAR1	52	98.165	ENSOCUG00000003901	GAR1	51	98.165	Oryctolagus_cuniculus
ENSBTAG00000000748	GAR1	100	95.327	ENSOGAG00000004693	GAR1	100	95.327	Otolemur_garnettii
ENSBTAG00000000748	GAR1	100	99.052	ENSOARG00000004910	GAR1	100	99.052	Ovis_aries
ENSBTAG00000000748	GAR1	52	99.083	ENSPPAG00000014081	GAR1	55	99.083	Pan_paniscus
ENSBTAG00000000748	GAR1	100	96.682	ENSPPRG00000023697	GAR1	100	96.682	Panthera_pardus
ENSBTAG00000000748	GAR1	100	96.682	ENSPTIG00000021565	GAR1	100	96.682	Panthera_tigris_altaica
ENSBTAG00000000748	GAR1	52	99.091	ENSPTRG00000016364	GAR1	55	99.083	Pan_troglodytes
ENSBTAG00000000748	GAR1	79	81.651	ENSPTRG00000049340	-	69	77.622	Pan_troglodytes
ENSBTAG00000000748	GAR1	52	99.091	ENSPANG00000000639	GAR1	50	99.083	Papio_anubis
ENSBTAG00000000748	GAR1	51	85.185	ENSPANG00000033062	-	58	81.818	Papio_anubis
ENSBTAG00000000748	GAR1	50	93.396	ENSPKIG00000018991	gar1	61	86.131	Paramormyrops_kingsleyae
ENSBTAG00000000748	GAR1	50	92.453	ENSPSIG00000002970	GAR1	50	90.826	Pelodiscus_sinensis
ENSBTAG00000000748	GAR1	52	95.413	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSBTAG00000000748	GAR1	51	92.523	ENSPFOG00000024155	gar1	51	92.523	Poecilia_formosa
ENSBTAG00000000748	GAR1	51	92.523	ENSPLAG00000015056	gar1	51	92.523	Poecilia_latipinna
ENSBTAG00000000748	GAR1	51	93.458	ENSPMEG00000009320	gar1	51	93.458	Poecilia_mexicana
ENSBTAG00000000748	GAR1	52	99.083	ENSPPYG00000014996	GAR1	50	99.083	Pongo_abelii
ENSBTAG00000000748	GAR1	51	99.065	ENSPCOG00000027049	GAR1	56	99.083	Propithecus_coquereli
ENSBTAG00000000748	GAR1	52	91.818	ENSPNYG00000020926	gar1	56	82.090	Pundamilia_nyererei
ENSBTAG00000000748	GAR1	52	96.364	ENSRNOG00000061146	Gar1	63	97.196	Rattus_norvegicus
ENSBTAG00000000748	GAR1	51	99.065	ENSRBIG00000019547	GAR1	55	99.083	Rhinopithecus_bieti
ENSBTAG00000000748	GAR1	53	81.250	ENSRBIG00000042411	-	53	80.734	Rhinopithecus_bieti
ENSBTAG00000000748	GAR1	52	99.091	ENSRROG00000028454	GAR1	55	99.083	Rhinopithecus_roxellana
ENSBTAG00000000748	GAR1	53	81.250	ENSRROG00000044348	-	52	80.734	Rhinopithecus_roxellana
ENSBTAG00000000748	GAR1	52	99.083	ENSSBOG00000024785	GAR1	50	99.083	Saimiri_boliviensis_boliviensis
ENSBTAG00000000748	GAR1	51	93.458	ENSSLDG00000023264	gar1	50	93.458	Seriola_lalandi_dorsalis
ENSBTAG00000000748	GAR1	50	93.396	ENSSPUG00000008707	GAR1	61	91.743	Sphenodon_punctatus
ENSBTAG00000000748	GAR1	99	98.551	ENSSSCG00000009137	GAR1	100	98.558	Sus_scrofa
ENSBTAG00000000748	GAR1	62	82.707	ENSTRUG00000020580	gar1	64	82.707	Takifugu_rubripes
ENSBTAG00000000748	GAR1	50	93.269	ENSTNIG00000013023	gar1	61	93.458	Tetraodon_nigroviridis
ENSBTAG00000000748	GAR1	88	96.237	ENSUAMG00000005652	GAR1	96	96.237	Ursus_americanus
ENSBTAG00000000748	GAR1	100	95.261	ENSUMAG00000000776	GAR1	100	95.261	Ursus_maritimus
ENSBTAG00000000748	GAR1	100	97.630	ENSVPAG00000009844	GAR1	88	97.630	Vicugna_pacos
ENSBTAG00000000748	GAR1	90	96.296	ENSVVUG00000017612	GAR1	100	95.305	Vulpes_vulpes