EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000000817 (Gene tree)
Gene ID: 518435
Gene Symbol: SYNJ2
Alias: -
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 109077 bases
Position: chr9:94544473-94653549
Accession: 35528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060719	Exo_endo_phos	PF03372.23	4.8e-14	1	1
ENSBTAP00000038897	Exo_endo_phos	PF03372.23	4.9e-14	1	1
ENSBTAP00000060719	DUF1866	PF08952.11	2.3e-58	1	1
ENSBTAP00000038897	DUF1866	PF08952.11	2.3e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000083000	-	5177	-	ENSBTAP00000060719	1442 (aa)	XP_024852880	UPI000D532F2C
ENSBTAT00000039096	-	5312	-	ENSBTAP00000038897	1487 (aa)	XP_024852879	F1N1U1

Gene Model

Click here to download ENSBTAG00000000817's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta00562	Inositol phosphate metabolism	KEGG
bta01100	Metabolic pathways	KEGG
bta04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000000817	SYNJ2	90	46.914	ENSBTAG00000003063	SYNJ1	80	53.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000817	SYNJ2	100	83.201	ENSG00000078269	SYNJ2	99	92.593	Homo_sapiens
ENSBTAG00000000817	SYNJ2	97	83.092	ENSAMEG00000009581	SYNJ2	100	82.885	Ailuropoda_melanoleuca
ENSBTAG00000000817	SYNJ2	99	68.158	ENSAPLG00000002563	SYNJ2	99	68.092	Anas_platyrhynchos
ENSBTAG00000000817	SYNJ2	92	69.774	ENSACAG00000004945	SYNJ2	90	70.669	Anolis_carolinensis
ENSBTAG00000000817	SYNJ2	100	82.216	ENSANAG00000026575	SYNJ2	97	88.141	Aotus_nancymaae
ENSBTAG00000000817	SYNJ2	100	82.415	ENSCJAG00000003570	SYNJ2	97	88.381	Callithrix_jacchus
ENSBTAG00000000817	SYNJ2	97	85.744	ENSCAFG00000000644	SYNJ2	100	85.724	Canis_familiaris
ENSBTAG00000000817	SYNJ2	100	85.162	ENSCAFG00020015809	SYNJ2	100	85.310	Canis_lupus_dingo
ENSBTAG00000000817	SYNJ2	100	95.703	ENSCHIG00000011077	SYNJ2	100	95.703	Capra_hircus
ENSBTAG00000000817	SYNJ2	97	82.947	ENSTSYG00000014342	SYNJ2	94	88.714	Carlito_syrichta
ENSBTAG00000000817	SYNJ2	96	79.834	ENSCAPG00000000287	SYNJ2	96	85.863	Cavia_aperea
ENSBTAG00000000817	SYNJ2	100	82.557	ENSCPOG00000009144	SYNJ2	96	89.121	Cavia_porcellus
ENSBTAG00000000817	SYNJ2	100	82.283	ENSCCAG00000025484	SYNJ2	97	88.221	Cebus_capucinus
ENSBTAG00000000817	SYNJ2	100	83.732	ENSCATG00000042943	SYNJ2	97	88.791	Cercocebus_atys
ENSBTAG00000000817	SYNJ2	100	83.445	ENSCLAG00000004730	SYNJ2	100	83.511	Chinchilla_lanigera
ENSBTAG00000000817	SYNJ2	100	83.665	ENSCSAG00000013130	SYNJ2	100	83.599	Chlorocebus_sabaeus
ENSBTAG00000000817	SYNJ2	52	93.750	ENSCHOG00000000343	-	52	93.750	Choloepus_hoffmanni
ENSBTAG00000000817	SYNJ2	99	69.737	ENSCPBG00000016273	SYNJ2	98	70.197	Chrysemys_picta_bellii
ENSBTAG00000000817	SYNJ2	98	83.390	ENSCANG00000040349	SYNJ2	97	88.531	Colobus_angolensis_palliatus
ENSBTAG00000000817	SYNJ2	99	82.278	ENSCGRG00001004257	Synj2	97	88.466	Cricetulus_griseus_chok1gshd
ENSBTAG00000000817	SYNJ2	96	82.210	ENSCGRG00000001656	Synj2	97	88.466	Cricetulus_griseus_crigri
ENSBTAG00000000817	SYNJ2	97	72.534	ENSDNOG00000015900	SYNJ2	96	82.206	Dasypus_novemcinctus
ENSBTAG00000000817	SYNJ2	97	80.109	ENSDORG00000014128	Synj2	97	79.836	Dipodomys_ordii
ENSBTAG00000000817	SYNJ2	82	87.161	ENSETEG00000017418	SYNJ2	82	87.161	Echinops_telfairi
ENSBTAG00000000817	SYNJ2	100	86.997	ENSEASG00005018902	SYNJ2	100	86.930	Equus_asinus_asinus
ENSBTAG00000000817	SYNJ2	100	86.729	ENSECAG00000012646	SYNJ2	94	86.662	Equus_caballus
ENSBTAG00000000817	SYNJ2	54	73.548	ENSEEUG00000015796	-	57	73.548	Erinaceus_europaeus
ENSBTAG00000000817	SYNJ2	100	85.695	ENSFCAG00000010854	SYNJ2	97	90.565	Felis_catus
ENSBTAG00000000817	SYNJ2	96	67.466	ENSFALG00000012593	SYNJ2	99	67.625	Ficedula_albicollis
ENSBTAG00000000817	SYNJ2	97	82.877	ENSFDAG00000016352	SYNJ2	99	85.022	Fukomys_damarensis
ENSBTAG00000000817	SYNJ2	99	69.470	ENSGALG00000013727	SYNJ2	99	68.845	Gallus_gallus
ENSBTAG00000000817	SYNJ2	99	69.735	ENSGAGG00000009857	SYNJ2	98	70.199	Gopherus_agassizii
ENSBTAG00000000817	SYNJ2	100	83.267	ENSGGOG00000012210	SYNJ2	97	88.471	Gorilla_gorilla
ENSBTAG00000000817	SYNJ2	100	83.211	ENSHGLG00000007534	SYNJ2	100	83.311	Heterocephalus_glaber_female
ENSBTAG00000000817	SYNJ2	98	83.141	ENSHGLG00100009973	SYNJ2	96	89.121	Heterocephalus_glaber_male
ENSBTAG00000000817	SYNJ2	97	81.720	ENSSTOG00000016474	SYNJ2	99	82.425	Ictidomys_tridecemlineatus
ENSBTAG00000000817	SYNJ2	97	80.636	ENSJJAG00000014436	Synj2	96	84.749	Jaculus_jaculus
ENSBTAG00000000817	SYNJ2	71	69.036	ENSLACG00000007316	SYNJ2	99	69.137	Latimeria_chalumnae
ENSBTAG00000000817	SYNJ2	97	81.112	ENSLAFG00000011979	SYNJ2	99	81.068	Loxodonta_africana
ENSBTAG00000000817	SYNJ2	93	89.182	ENSMFAG00000040552	SYNJ2	100	89.182	Macaca_fascicularis
ENSBTAG00000000817	SYNJ2	67	88.107	ENSMMUG00000007153	SYNJ2	96	88.404	Macaca_mulatta
ENSBTAG00000000817	SYNJ2	100	83.798	ENSMNEG00000017211	SYNJ2	97	88.951	Macaca_nemestrina
ENSBTAG00000000817	SYNJ2	100	80.677	ENSMLEG00000024911	SYNJ2	100	80.611	Mandrillus_leucophaeus
ENSBTAG00000000817	SYNJ2	88	72.937	ENSMGAG00000012839	SYNJ2	98	72.714	Meleagris_gallopavo
ENSBTAG00000000817	SYNJ2	99	81.440	ENSMAUG00000022212	Synj2	96	88.031	Mesocricetus_auratus
ENSBTAG00000000817	SYNJ2	100	82.372	ENSMICG00000015804	SYNJ2	97	87.260	Microcebus_murinus
ENSBTAG00000000817	SYNJ2	99	81.263	ENSMOCG00000020054	Synj2	99	86.783	Microtus_ochrogaster
ENSBTAG00000000817	SYNJ2	100	77.895	ENSMODG00000007783	SYNJ2	100	77.748	Monodelphis_domestica
ENSBTAG00000000817	SYNJ2	99	80.956	MGP_CAROLIEiJ_G0021026	Synj2	100	90.166	Mus_caroli
ENSBTAG00000000817	SYNJ2	99	80.914	ENSMUSG00000023805	Synj2	100	90.166	Mus_musculus
ENSBTAG00000000817	SYNJ2	99	80.444	MGP_PahariEiJ_G0023344	Synj2	100	89.561	Mus_pahari
ENSBTAG00000000817	SYNJ2	99	80.645	MGP_SPRETEiJ_G0021931	Synj2	100	89.713	Mus_spretus
ENSBTAG00000000817	SYNJ2	87	87.597	ENSMPUG00000005323	SYNJ2	97	87.597	Mustela_putorius_furo
ENSBTAG00000000817	SYNJ2	95	84.236	ENSMLUG00000000324	SYNJ2	100	83.989	Myotis_lucifugus
ENSBTAG00000000817	SYNJ2	99	82.247	ENSNGAG00000014859	Synj2	98	87.547	Nannospalax_galili
ENSBTAG00000000817	SYNJ2	100	79.934	ENSNLEG00000010750	SYNJ2	97	84.701	Nomascus_leucogenys
ENSBTAG00000000817	SYNJ2	92	81.919	ENSMEUG00000003493	SYNJ2	95	81.919	Notamacropus_eugenii
ENSBTAG00000000817	SYNJ2	93	78.271	ENSOPRG00000009648	SYNJ2	93	78.271	Ochotona_princeps
ENSBTAG00000000817	SYNJ2	100	82.212	ENSODEG00000007709	SYNJ2	94	89.641	Octodon_degus
ENSBTAG00000000817	SYNJ2	97	78.765	ENSOCUG00000004762	SYNJ2	100	79.850	Oryctolagus_cuniculus
ENSBTAG00000000817	SYNJ2	78	86.442	ENSOGAG00000000488	SYNJ2	100	87.565	Otolemur_garnettii
ENSBTAG00000000817	SYNJ2	97	93.513	ENSOARG00000004304	SYNJ2	100	93.513	Ovis_aries
ENSBTAG00000000817	SYNJ2	99	83.123	ENSPPAG00000028831	SYNJ2	99	82.990	Pan_paniscus
ENSBTAG00000000817	SYNJ2	100	85.628	ENSPPRG00000009068	SYNJ2	97	90.484	Panthera_pardus
ENSBTAG00000000817	SYNJ2	97	85.477	ENSPTIG00000018780	SYNJ2	94	90.476	Panthera_tigris_altaica
ENSBTAG00000000817	SYNJ2	100	83.400	ENSPTRG00000018739	SYNJ2	100	88.339	Pan_troglodytes
ENSBTAG00000000817	SYNJ2	100	83.665	ENSPANG00000010755	SYNJ2	97	88.791	Papio_anubis
ENSBTAG00000000817	SYNJ2	95	70.248	ENSPSIG00000014659	SYNJ2	98	70.110	Pelodiscus_sinensis
ENSBTAG00000000817	SYNJ2	97	81.774	ENSPEMG00000006247	Synj2	96	87.855	Peromyscus_maniculatus_bairdii
ENSBTAG00000000817	SYNJ2	100	78.146	ENSPCIG00000010179	SYNJ2	100	77.881	Phascolarctos_cinereus
ENSBTAG00000000817	SYNJ2	100	83.134	ENSPPYG00000017130	SYNJ2	100	83.068	Pongo_abelii
ENSBTAG00000000817	SYNJ2	87	87.097	ENSPCAG00000009217	SYNJ2	86	87.097	Procavia_capensis
ENSBTAG00000000817	SYNJ2	100	83.355	ENSPCOG00000026910	SYNJ2	97	89.022	Propithecus_coquereli
ENSBTAG00000000817	SYNJ2	100	83.311	ENSPVAG00000006131	SYNJ2	100	82.696	Pteropus_vampyrus
ENSBTAG00000000817	SYNJ2	99	79.333	ENSRNOG00000017114	Synj2	97	86.602	Rattus_norvegicus
ENSBTAG00000000817	SYNJ2	99	81.818	ENSRBIG00000044126	SYNJ2	100	81.551	Rhinopithecus_bieti
ENSBTAG00000000817	SYNJ2	100	83.267	ENSRROG00000027755	SYNJ2	97	88.391	Rhinopithecus_roxellana
ENSBTAG00000000817	SYNJ2	100	82.681	ENSSBOG00000034876	SYNJ2	97	88.221	Saimiri_boliviensis_boliviensis
ENSBTAG00000000817	SYNJ2	98	78.011	ENSSHAG00000018881	SYNJ2	100	78.078	Sarcophilus_harrisii
ENSBTAG00000000817	SYNJ2	99	66.886	ENSSPUG00000000491	SYNJ2	96	71.366	Sphenodon_punctatus
ENSBTAG00000000817	SYNJ2	87	92.171	ENSSSCG00000012315	SYNJ2	97	92.581	Sus_scrofa
ENSBTAG00000000817	SYNJ2	89	72.235	ENSTGUG00000011082	SYNJ2	100	72.606	Taeniopygia_guttata
ENSBTAG00000000817	SYNJ2	82	81.982	ENSTBEG00000015827	SYNJ2	85	81.982	Tupaia_belangeri
ENSBTAG00000000817	SYNJ2	100	84.440	ENSTTRG00000009677	SYNJ2	100	84.574	Tursiops_truncatus
ENSBTAG00000000817	SYNJ2	53	78.289	ENSUAMG00000021958	-	98	78.672	Ursus_americanus
ENSBTAG00000000817	SYNJ2	66	86.911	ENSUMAG00000012826	SYNJ2	96	86.911	Ursus_maritimus
ENSBTAG00000000817	SYNJ2	84	81.188	ENSVVUG00000007407	SYNJ2	100	89.139	Vulpes_vulpes
ENSBTAG00000000817	SYNJ2	91	65.869	ENSXETG00000034066	synj2	86	66.178	Xenopus_tropicalis