EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000000848 (Gene tree)
Gene ID: 510529
Gene Symbol: SNRNP200
Alias: -
Full Name: Bos taurus small nuclear ribonucleoprotein U5 subunit 200 (SNRNP200)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 25266 bases
Position: chr11:2375182-2400447
Accession: NM_001206163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000001130	ResIII	PF04851.15	1.8e-25	1	2
ENSBTAP00000001130	ResIII	PF04851.15	1.8e-25	2	2
ENSBTAP00000001130	DEAD	PF00270.29	9.9e-52	1	2
ENSBTAP00000001130	DEAD	PF00270.29	9.9e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000001130	-	6786	-	ENSBTAP00000001130	2136 (aa)	-	E1BH78

Gene Model

Click here to download ENSBTAG00000000848's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000000848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000000848	SNRNP200	75	31.181	ENSBTAG00000020856	HFM1	58	31.181
ENSBTAG00000000848	SNRNP200	80	44.626	ENSBTAG00000020482	ASCC3	81	44.626

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000000848	SNRNP200	100	99.298	ENSG00000144028	SNRNP200	100	99.298	Homo_sapiens
ENSBTAG00000000848	SNRNP200	99	90.700	ENSAPOG00000010223	snrnp200	99	90.590	Acanthochromis_polyacanthus
ENSBTAG00000000848	SNRNP200	100	99.345	ENSAMEG00000008996	SNRNP200	100	99.345	Ailuropoda_melanoleuca
ENSBTAG00000000848	SNRNP200	97	89.936	ENSACIG00000001764	snrnp200	98	89.936	Amphilophus_citrinellus
ENSBTAG00000000848	SNRNP200	99	90.606	ENSAOCG00000024593	snrnp200	100	89.829	Amphiprion_ocellaris
ENSBTAG00000000848	SNRNP200	97	89.882	ENSAPEG00000012554	snrnp200	100	89.882	Amphiprion_percula
ENSBTAG00000000848	SNRNP200	99	90.559	ENSATEG00000022522	snrnp200	99	90.449	Anabas_testudineus
ENSBTAG00000000848	SNRNP200	99	97.313	ENSAPLG00000004313	SNRNP200	100	97.313	Anas_platyrhynchos
ENSBTAG00000000848	SNRNP200	99	97.322	ENSACAG00000000434	SNRNP200	100	97.322	Anolis_carolinensis
ENSBTAG00000000848	SNRNP200	100	94.729	ENSANAG00000036625	SNRNP200	100	95.149	Aotus_nancymaae
ENSBTAG00000000848	SNRNP200	99	90.230	ENSACLG00000011188	snrnp200	99	90.122	Astatotilapia_calliptera
ENSBTAG00000000848	SNRNP200	99	90.512	ENSAMXG00000005684	snrnp200	99	90.403	Astyanax_mexicanus
ENSBTAG00000000848	SNRNP200	100	99.251	ENSCJAG00000007514	SNRNP200	100	99.251	Callithrix_jacchus
ENSBTAG00000000848	SNRNP200	100	98.553	ENSCAFG00020019979	SNRNP200	100	99.242	Canis_lupus_dingo
ENSBTAG00000000848	SNRNP200	100	99.625	ENSCHIG00000020611	SNRNP200	100	99.625	Capra_hircus
ENSBTAG00000000848	SNRNP200	100	99.298	ENSTSYG00000010467	SNRNP200	100	99.298	Carlito_syrichta
ENSBTAG00000000848	SNRNP200	99	98.919	ENSCAPG00000017234	SNRNP200	99	98.919	Cavia_aperea
ENSBTAG00000000848	SNRNP200	100	99.204	ENSCPOG00000006776	SNRNP200	100	99.204	Cavia_porcellus
ENSBTAG00000000848	SNRNP200	100	99.251	ENSCCAG00000033962	SNRNP200	100	99.251	Cebus_capucinus
ENSBTAG00000000848	SNRNP200	100	99.298	ENSCATG00000015790	SNRNP200	100	99.298	Cercocebus_atys
ENSBTAG00000000848	SNRNP200	100	99.157	ENSCLAG00000004116	SNRNP200	100	99.157	Chinchilla_lanigera
ENSBTAG00000000848	SNRNP200	100	99.251	ENSCSAG00000017369	SNRNP200	100	99.251	Chlorocebus_sabaeus
ENSBTAG00000000848	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSBTAG00000000848	SNRNP200	100	97.382	ENSCPBG00000022571	SNRNP200	100	97.382	Chrysemys_picta_bellii
ENSBTAG00000000848	SNRNP200	99	76.460	ENSCING00000005082	-	99	76.600	Ciona_intestinalis
ENSBTAG00000000848	SNRNP200	100	93.788	ENSCANG00000033932	SNRNP200	100	99.204	Colobus_angolensis_palliatus
ENSBTAG00000000848	SNRNP200	100	99.251	ENSCGRG00001022610	Snrnp200	100	99.251	Cricetulus_griseus_chok1gshd
ENSBTAG00000000848	SNRNP200	100	98.691	ENSCGRG00000016472	Snrnp200	100	98.691	Cricetulus_griseus_crigri
ENSBTAG00000000848	SNRNP200	100	89.747	ENSCSEG00000016399	snrnp200	100	89.747	Cynoglossus_semilaevis
ENSBTAG00000000848	SNRNP200	100	85.440	ENSCVAG00000017631	snrnp200	99	85.440	Cyprinodon_variegatus
ENSBTAG00000000848	SNRNP200	100	90.169	ENSDARG00000077536	snrnp200	99	90.169	Danio_rerio
ENSBTAG00000000848	SNRNP200	100	98.034	ENSDNOG00000011227	SNRNP200	100	98.034	Dasypus_novemcinctus
ENSBTAG00000000848	SNRNP200	100	96.587	ENSDORG00000005861	Snrnp200	100	96.587	Dipodomys_ordii
ENSBTAG00000000848	SNRNP200	100	74.255	FBgn0263599	l(3)72Ab	99	74.162	Drosophila_melanogaster
ENSBTAG00000000848	SNRNP200	95	99.569	ENSETEG00000000162	SNRNP200	74	99.569	Echinops_telfairi
ENSBTAG00000000848	SNRNP200	83	81.614	ENSEBUG00000016524	snrnp200	95	81.614	Eptatretus_burgeri
ENSBTAG00000000848	SNRNP200	100	98.228	ENSEASG00005001884	SNRNP200	100	98.228	Equus_asinus_asinus
ENSBTAG00000000848	SNRNP200	100	99.345	ENSECAG00000019675	SNRNP200	100	99.345	Equus_caballus
ENSBTAG00000000848	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSBTAG00000000848	SNRNP200	99	90.606	ENSELUG00000018948	snrnp200	99	90.496	Esox_lucius
ENSBTAG00000000848	SNRNP200	100	99.391	ENSFCAG00000010699	SNRNP200	100	99.391	Felis_catus
ENSBTAG00000000848	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSBTAG00000000848	SNRNP200	100	99.251	ENSFDAG00000004683	SNRNP200	100	99.251	Fukomys_damarensis
ENSBTAG00000000848	SNRNP200	100	87.594	ENSFHEG00000003786	snrnp200	99	87.594	Fundulus_heteroclitus
ENSBTAG00000000848	SNRNP200	100	89.486	ENSGMOG00000004881	snrnp200	99	89.439	Gadus_morhua
ENSBTAG00000000848	SNRNP200	100	87.828	ENSGAFG00000010807	snrnp200	99	87.828	Gambusia_affinis
ENSBTAG00000000848	SNRNP200	100	89.771	ENSGACG00000011474	snrnp200	99	89.678	Gasterosteus_aculeatus
ENSBTAG00000000848	SNRNP200	95	97.275	ENSGAGG00000016069	SNRNP200	99	97.275	Gopherus_agassizii
ENSBTAG00000000848	SNRNP200	100	99.298	ENSGGOG00000005174	SNRNP200	100	99.298	Gorilla_gorilla
ENSBTAG00000000848	SNRNP200	97	87.513	ENSHBUG00000011322	snrnp200	99	87.560	Haplochromis_burtoni
ENSBTAG00000000848	SNRNP200	100	99.298	ENSHGLG00000006654	SNRNP200	100	99.298	Heterocephalus_glaber_female
ENSBTAG00000000848	SNRNP200	100	99.298	ENSHGLG00100018594	SNRNP200	100	99.298	Heterocephalus_glaber_male
ENSBTAG00000000848	SNRNP200	100	99.298	ENSSTOG00000016351	SNRNP200	100	99.298	Ictidomys_tridecemlineatus
ENSBTAG00000000848	SNRNP200	100	99.064	ENSJJAG00000023659	Snrnp200	100	99.064	Jaculus_jaculus
ENSBTAG00000000848	SNRNP200	100	87.354	ENSKMAG00000003665	snrnp200	99	87.354	Kryptolebias_marmoratus
ENSBTAG00000000848	SNRNP200	100	90.075	ENSLBEG00000021585	snrnp200	99	90.075	Labrus_bergylta
ENSBTAG00000000848	SNRNP200	82	94.148	ENSLACG00000000226	SNRNP200	99	94.148	Latimeria_chalumnae
ENSBTAG00000000848	SNRNP200	100	91.994	ENSLOCG00000015198	snrnp200	99	91.994	Lepisosteus_oculatus
ENSBTAG00000000848	SNRNP200	100	99.110	ENSLAFG00000015626	SNRNP200	100	99.110	Loxodonta_africana
ENSBTAG00000000848	SNRNP200	100	99.251	ENSMFAG00000040174	SNRNP200	100	99.251	Macaca_fascicularis
ENSBTAG00000000848	SNRNP200	100	99.251	ENSMMUG00000023261	SNRNP200	100	99.251	Macaca_mulatta
ENSBTAG00000000848	SNRNP200	100	99.204	ENSMNEG00000032398	SNRNP200	100	99.204	Macaca_nemestrina
ENSBTAG00000000848	SNRNP200	100	99.298	ENSMLEG00000019083	SNRNP200	100	99.298	Mandrillus_leucophaeus
ENSBTAG00000000848	SNRNP200	100	89.939	ENSMAMG00000007851	snrnp200	99	89.892	Mastacembelus_armatus
ENSBTAG00000000848	SNRNP200	97	87.513	ENSMZEG00005010787	snrnp200	99	87.560	Maylandia_zebra
ENSBTAG00000000848	SNRNP200	97	96.855	ENSMGAG00000001831	SNRNP200	100	96.855	Meleagris_gallopavo
ENSBTAG00000000848	SNRNP200	100	99.204	ENSMAUG00000011825	Snrnp200	100	99.204	Mesocricetus_auratus
ENSBTAG00000000848	SNRNP200	100	99.251	ENSMICG00000004710	SNRNP200	100	99.251	Microcebus_murinus
ENSBTAG00000000848	SNRNP200	100	96.629	ENSMOCG00000011814	Snrnp200	100	96.629	Microtus_ochrogaster
ENSBTAG00000000848	SNRNP200	99	88.868	ENSMMOG00000014167	snrnp200	99	88.764	Mola_mola
ENSBTAG00000000848	SNRNP200	100	98.502	ENSMODG00000008475	SNRNP200	100	98.502	Monodelphis_domestica
ENSBTAG00000000848	SNRNP200	99	90.606	ENSMALG00000001973	snrnp200	99	90.496	Monopterus_albus
ENSBTAG00000000848	SNRNP200	100	99.017	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.017	Mus_caroli
ENSBTAG00000000848	SNRNP200	100	99.064	ENSMUSG00000003660	Snrnp200	100	99.064	Mus_musculus
ENSBTAG00000000848	SNRNP200	100	99.110	MGP_PahariEiJ_G0025695	Snrnp200	100	99.110	Mus_pahari
ENSBTAG00000000848	SNRNP200	100	99.064	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.064	Mus_spretus
ENSBTAG00000000848	SNRNP200	100	99.298	ENSMPUG00000008949	SNRNP200	100	99.298	Mustela_putorius_furo
ENSBTAG00000000848	SNRNP200	100	95.084	ENSMLUG00000027511	-	100	95.084	Myotis_lucifugus
ENSBTAG00000000848	SNRNP200	100	98.784	ENSMLUG00000010493	SNRNP200	100	98.784	Myotis_lucifugus
ENSBTAG00000000848	SNRNP200	100	99.298	ENSNGAG00000021993	Snrnp200	100	99.298	Nannospalax_galili
ENSBTAG00000000848	SNRNP200	90	90.029	ENSNBRG00000017960	snrnp200	98	90.029	Neolamprologus_brichardi
ENSBTAG00000000848	SNRNP200	100	94.654	ENSNLEG00000000025	SNRNP200	100	95.441	Nomascus_leucogenys
ENSBTAG00000000848	SNRNP200	100	98.095	ENSMEUG00000010532	SNRNP200	79	98.095	Notamacropus_eugenii
ENSBTAG00000000848	SNRNP200	100	95.365	ENSOPRG00000015464	SNRNP200	100	95.365	Ochotona_princeps
ENSBTAG00000000848	SNRNP200	100	99.157	ENSODEG00000008366	SNRNP200	100	99.157	Octodon_degus
ENSBTAG00000000848	SNRNP200	99	90.230	ENSONIG00000010714	snrnp200	99	90.122	Oreochromis_niloticus
ENSBTAG00000000848	SNRNP200	100	99.157	ENSOCUG00000009864	SNRNP200	100	99.157	Oryctolagus_cuniculus
ENSBTAG00000000848	SNRNP200	100	89.934	ENSORLG00000012286	snrnp200	100	89.934	Oryzias_latipes
ENSBTAG00000000848	SNRNP200	100	89.981	ENSORLG00020004648	snrnp200	100	89.981	Oryzias_latipes_hni
ENSBTAG00000000848	SNRNP200	100	89.934	ENSORLG00015019114	snrnp200	100	89.934	Oryzias_latipes_hsok
ENSBTAG00000000848	SNRNP200	99	90.183	ENSOMEG00000011834	snrnp200	99	90.075	Oryzias_melastigma
ENSBTAG00000000848	SNRNP200	100	99.298	ENSOGAG00000006879	SNRNP200	100	99.298	Otolemur_garnettii
ENSBTAG00000000848	SNRNP200	100	98.596	ENSOARG00000013949	SNRNP200	100	98.596	Ovis_aries
ENSBTAG00000000848	SNRNP200	100	99.298	ENSPPAG00000041559	SNRNP200	100	99.298	Pan_paniscus
ENSBTAG00000000848	SNRNP200	100	99.391	ENSPPRG00000004435	SNRNP200	100	99.391	Panthera_pardus
ENSBTAG00000000848	SNRNP200	100	98.923	ENSPTIG00000006380	SNRNP200	100	98.923	Panthera_tigris_altaica
ENSBTAG00000000848	SNRNP200	100	99.298	ENSPTRG00000012230	SNRNP200	100	99.298	Pan_troglodytes
ENSBTAG00000000848	SNRNP200	100	99.345	ENSPANG00000006017	SNRNP200	100	99.345	Papio_anubis
ENSBTAG00000000848	SNRNP200	100	90.871	ENSPKIG00000014762	snrnp200	99	90.871	Paramormyrops_kingsleyae
ENSBTAG00000000848	SNRNP200	100	96.303	ENSPSIG00000008580	SNRNP200	100	96.303	Pelodiscus_sinensis
ENSBTAG00000000848	SNRNP200	100	98.502	ENSPCIG00000023050	SNRNP200	100	98.502	Phascolarctos_cinereus
ENSBTAG00000000848	SNRNP200	100	90.173	ENSPFOG00000015110	snrnp200	99	90.173	Poecilia_formosa
ENSBTAG00000000848	SNRNP200	97	90.000	ENSPLAG00000006711	snrnp200	99	90.000	Poecilia_latipinna
ENSBTAG00000000848	SNRNP200	97	89.945	ENSPMEG00000021166	snrnp200	99	89.945	Poecilia_mexicana
ENSBTAG00000000848	SNRNP200	100	90.262	ENSPREG00000008875	snrnp200	99	90.262	Poecilia_reticulata
ENSBTAG00000000848	SNRNP200	100	99.298	ENSPPYG00000012068	SNRNP200	100	99.298	Pongo_abelii
ENSBTAG00000000848	SNRNP200	95	99.087	ENSPCAG00000008536	SNRNP200	86	99.087	Procavia_capensis
ENSBTAG00000000848	SNRNP200	100	99.298	ENSPCOG00000024608	SNRNP200	100	99.298	Propithecus_coquereli
ENSBTAG00000000848	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSBTAG00000000848	SNRNP200	99	85.714	ENSPNYG00000017476	snrnp200	99	85.621	Pundamilia_nyererei
ENSBTAG00000000848	SNRNP200	100	85.815	ENSPNAG00000010998	snrnp200	99	85.815	Pygocentrus_nattereri
ENSBTAG00000000848	SNRNP200	100	99.204	ENSRNOG00000012157	Snrnp200	100	99.204	Rattus_norvegicus
ENSBTAG00000000848	SNRNP200	100	99.298	ENSRBIG00000044690	-	100	99.298	Rhinopithecus_bieti
ENSBTAG00000000848	SNRNP200	100	99.298	ENSRROG00000037952	-	100	99.298	Rhinopithecus_roxellana
ENSBTAG00000000848	SNRNP200	100	99.251	ENSSBOG00000035471	SNRNP200	100	99.251	Saimiri_boliviensis_boliviensis
ENSBTAG00000000848	SNRNP200	97	98.403	ENSSHAG00000000758	SNRNP200	100	98.403	Sarcophilus_harrisii
ENSBTAG00000000848	SNRNP200	99	91.357	ENSSFOG00015018826	snrnp200	99	91.245	Scleropages_formosus
ENSBTAG00000000848	SNRNP200	99	90.277	ENSSMAG00000005463	snrnp200	99	90.169	Scophthalmus_maximus
ENSBTAG00000000848	SNRNP200	99	90.559	ENSSDUG00000021410	snrnp200	99	90.449	Seriola_dumerili
ENSBTAG00000000848	SNRNP200	99	90.512	ENSSLDG00000010884	snrnp200	99	90.403	Seriola_lalandi_dorsalis
ENSBTAG00000000848	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSBTAG00000000848	SNRNP200	100	97.191	ENSSPUG00000003726	-	100	97.191	Sphenodon_punctatus
ENSBTAG00000000848	SNRNP200	99	90.606	ENSSPAG00000001842	snrnp200	99	90.496	Stegastes_partitus
ENSBTAG00000000848	SNRNP200	100	99.204	ENSSSCG00000008127	SNRNP200	100	99.204	Sus_scrofa
ENSBTAG00000000848	SNRNP200	99	87.730	ENSTGUG00000014475	-	100	87.730	Taeniopygia_guttata
ENSBTAG00000000848	SNRNP200	99	90.324	ENSTRUG00000001307	snrnp200	99	90.215	Takifugu_rubripes
ENSBTAG00000000848	SNRNP200	100	85.791	ENSTNIG00000004320	snrnp200	100	85.791	Tetraodon_nigroviridis
ENSBTAG00000000848	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSBTAG00000000848	SNRNP200	100	99.017	ENSTTRG00000004983	SNRNP200	100	99.017	Tursiops_truncatus
ENSBTAG00000000848	SNRNP200	76	92.829	ENSUAMG00000008395	-	95	92.829	Ursus_americanus
ENSBTAG00000000848	SNRNP200	100	99.391	ENSUMAG00000012385	SNRNP200	100	99.391	Ursus_maritimus
ENSBTAG00000000848	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSBTAG00000000848	SNRNP200	100	99.159	ENSVVUG00000026247	SNRNP200	100	99.159	Vulpes_vulpes
ENSBTAG00000000848	SNRNP200	100	94.156	ENSXETG00000001243	snrnp200	100	94.156	Xenopus_tropicalis
ENSBTAG00000000848	SNRNP200	97	90.257	ENSXMAG00000002058	snrnp200	98	90.257	Xiphophorus_maculatus