EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000001078 (Gene tree)
Gene ID: 513912
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 34587 bases
Position: chr25:3397612-3432198
Accession: 513912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000001429	MMR_HSR1	PF01926.23	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000001429	SRL-201	2382	-	ENSBTAP00000001429	791 (aa)	XP_005224712	F1MJW7

Gene Model

Click here to download ENSBTAG00000001078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000001078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000001078	SRL	58	95.824	ENSG00000185739	SRL	99	96.744	Homo_sapiens
ENSBTAG00000001078	SRL	58	82.237	ENSAPOG00000018093	srl	99	83.521	Acanthochromis_polyacanthus
ENSBTAG00000001078	SRL	56	75.510	ENSAPOG00000012432	SRL	98	73.991	Acanthochromis_polyacanthus
ENSBTAG00000001078	SRL	97	97.788	ENSAMEG00000010862	SRL	81	97.788	Ailuropoda_melanoleuca
ENSBTAG00000001078	SRL	56	74.944	ENSACIG00000015419	SRL	99	74.944	Amphilophus_citrinellus
ENSBTAG00000001078	SRL	57	83.407	ENSACIG00000015799	srl	99	83.407	Amphilophus_citrinellus
ENSBTAG00000001078	SRL	55	84.491	ENSAOCG00000007574	srl	99	84.491	Amphiprion_ocellaris
ENSBTAG00000001078	SRL	56	75.113	ENSAOCG00000017049	SRL	96	75.113	Amphiprion_ocellaris
ENSBTAG00000001078	SRL	58	82.456	ENSAPEG00000006911	srl	96	82.456	Amphiprion_percula
ENSBTAG00000001078	SRL	56	71.882	ENSAPEG00000006533	SRL	96	71.429	Amphiprion_percula
ENSBTAG00000001078	SRL	56	72.907	ENSATEG00000009643	SRL	52	72.907	Anabas_testudineus
ENSBTAG00000001078	SRL	56	84.127	ENSATEG00000024315	srl	96	82.018	Anabas_testudineus
ENSBTAG00000001078	SRL	56	89.602	ENSACAG00000016380	SRL	85	88.362	Anolis_carolinensis
ENSBTAG00000001078	SRL	58	82.237	ENSACLG00000027685	srl	98	83.073	Astatotilapia_calliptera
ENSBTAG00000001078	SRL	79	57.037	ENSACLG00000024674	SRL	56	72.467	Astatotilapia_calliptera
ENSBTAG00000001078	SRL	52	77.590	ENSAMXG00000038693	SRL	99	73.230	Astyanax_mexicanus
ENSBTAG00000001078	SRL	56	83.559	ENSAMXG00000018789	srl	87	83.559	Astyanax_mexicanus
ENSBTAG00000001078	SRL	56	96.833	ENSCJAG00000019750	SRL	96	96.044	Callithrix_jacchus
ENSBTAG00000001078	SRL	97	69.301	ENSCAFG00000019233	SRL	84	97.788	Canis_familiaris
ENSBTAG00000001078	SRL	99	76.792	ENSCAFG00020025024	SRL	57	96.753	Canis_lupus_dingo
ENSBTAG00000001078	SRL	99	94.493	ENSCHIG00000017927	SRL	99	94.493	Capra_hircus
ENSBTAG00000001078	SRL	58	96.703	ENSTSYG00000007919	SRL	99	97.442	Carlito_syrichta
ENSBTAG00000001078	SRL	57	97.130	ENSCPOG00000012643	SRL	96	97.130	Cavia_porcellus
ENSBTAG00000001078	SRL	56	90.498	ENSCCAG00000032646	SRL	99	96.825	Cebus_capucinus
ENSBTAG00000001078	SRL	99	83.099	ENSCATG00000032227	-	96	95.824	Cercocebus_atys
ENSBTAG00000001078	SRL	57	96.909	ENSCLAG00000016242	SRL	96	96.909	Chinchilla_lanigera
ENSBTAG00000001078	SRL	99	83.784	ENSCSAG00000009635	-	73	96.247	Chlorocebus_sabaeus
ENSBTAG00000001078	SRL	80	95.855	ENSCHOG00000001618	SRL	85	95.855	Choloepus_hoffmanni
ENSBTAG00000001078	SRL	91	92.288	ENSCPBG00000026371	SRL	96	88.248	Chrysemys_picta_bellii
ENSBTAG00000001078	SRL	53	60.671	ENSCING00000005231	-	91	61.576	Ciona_intestinalis
ENSBTAG00000001078	SRL	57	96.239	ENSCANG00000035872	SRL	99	96.744	Colobus_angolensis_palliatus
ENSBTAG00000001078	SRL	98	68.728	ENSCGRG00001016630	Srl	96	95.806	Cricetulus_griseus_chok1gshd
ENSBTAG00000001078	SRL	98	68.728	ENSCGRG00000005458	Srl	96	95.806	Cricetulus_griseus_crigri
ENSBTAG00000001078	SRL	57	82.965	ENSCSEG00000016151	srl	96	82.965	Cynoglossus_semilaevis
ENSBTAG00000001078	SRL	56	72.398	ENSCSEG00000011866	SRL	89	72.398	Cynoglossus_semilaevis
ENSBTAG00000001078	SRL	56	84.127	ENSCVAG00000003513	srl	95	84.127	Cyprinodon_variegatus
ENSBTAG00000001078	SRL	59	71.757	ENSCVAG00000022465	SRL	60	74.279	Cyprinodon_variegatus
ENSBTAG00000001078	SRL	57	84.479	ENSDARG00000104587	srl	96	84.479	Danio_rerio
ENSBTAG00000001078	SRL	57	96.247	ENSDORG00000014807	Srl	96	96.247	Dipodomys_ordii
ENSBTAG00000001078	SRL	100	75.718	ENSEASG00005000942	SRL	56	96.760	Equus_asinus_asinus
ENSBTAG00000001078	SRL	100	73.608	ENSECAG00000024219	SRL	96	96.930	Equus_caballus
ENSBTAG00000001078	SRL	57	79.443	ENSELUG00000015616	srl	96	79.443	Esox_lucius
ENSBTAG00000001078	SRL	99	75.948	ENSFCAG00000022075	SRL	96	96.923	Felis_catus
ENSBTAG00000001078	SRL	57	90.529	ENSFALG00000004328	SRL	64	90.529	Ficedula_albicollis
ENSBTAG00000001078	SRL	57	96.468	ENSFDAG00000006199	SRL	96	96.468	Fukomys_damarensis
ENSBTAG00000001078	SRL	56	82.993	ENSFHEG00000011239	srl	95	82.993	Fundulus_heteroclitus
ENSBTAG00000001078	SRL	56	75.737	ENSFHEG00000011854	SRL	98	76.190	Fundulus_heteroclitus
ENSBTAG00000001078	SRL	56	81.015	ENSGMOG00000014954	srl	99	81.015	Gadus_morhua
ENSBTAG00000001078	SRL	100	61.071	ENSGALG00000038884	SRL	96	90.351	Gallus_gallus
ENSBTAG00000001078	SRL	57	82.301	ENSGAFG00000000010	srl	98	82.483	Gambusia_affinis
ENSBTAG00000001078	SRL	56	76.190	ENSGAFG00000016984	SRL	98	75.737	Gambusia_affinis
ENSBTAG00000001078	SRL	56	81.015	ENSGACG00000011332	srl	99	81.015	Gasterosteus_aculeatus
ENSBTAG00000001078	SRL	99	66.523	ENSGGOG00000011312	-	96	95.824	Gorilla_gorilla
ENSBTAG00000001078	SRL	58	82.237	ENSHBUG00000007581	srl	98	83.073	Haplochromis_burtoni
ENSBTAG00000001078	SRL	56	72.247	ENSHBUG00000015710	SRL	61	68.635	Haplochromis_burtoni
ENSBTAG00000001078	SRL	57	96.909	ENSHGLG00000015271	SRL	96	96.909	Heterocephalus_glaber_female
ENSBTAG00000001078	SRL	57	96.909	ENSHGLG00100019378	SRL	96	96.909	Heterocephalus_glaber_male
ENSBTAG00000001078	SRL	60	69.278	ENSHCOG00000001012	SRL	50	71.018	Hippocampus_comes
ENSBTAG00000001078	SRL	58	82.237	ENSHCOG00000008687	srl	98	84.127	Hippocampus_comes
ENSBTAG00000001078	SRL	56	82.207	ENSIPUG00000012513	srl	95	82.207	Ictalurus_punctatus
ENSBTAG00000001078	SRL	55	70.183	ENSIPUG00000011609	SRL	89	71.990	Ictalurus_punctatus
ENSBTAG00000001078	SRL	98	65.570	ENSSTOG00000021151	-	96	96.689	Ictidomys_tridecemlineatus
ENSBTAG00000001078	SRL	57	96.468	ENSJJAG00000016400	Srl	96	96.468	Jaculus_jaculus
ENSBTAG00000001078	SRL	56	83.258	ENSKMAG00000014115	srl	93	85.714	Kryptolebias_marmoratus
ENSBTAG00000001078	SRL	56	75.682	ENSKMAG00000019537	SRL	99	75.682	Kryptolebias_marmoratus
ENSBTAG00000001078	SRL	56	75.283	ENSLBEG00000013811	SRL	95	75.057	Labrus_bergylta
ENSBTAG00000001078	SRL	57	82.483	ENSLBEG00000026643	srl	96	82.483	Labrus_bergylta
ENSBTAG00000001078	SRL	57	85.177	ENSLACG00000002825	SRL	99	85.177	Latimeria_chalumnae
ENSBTAG00000001078	SRL	57	84.361	ENSLOCG00000002644	srl	97	84.361	Lepisosteus_oculatus
ENSBTAG00000001078	SRL	97	71.659	ENSLAFG00000006329	SRL	54	93.446	Loxodonta_africana
ENSBTAG00000001078	SRL	54	96.744	ENSMFAG00000037383	SRL	99	96.744	Macaca_fascicularis
ENSBTAG00000001078	SRL	99	84.364	ENSMNEG00000019236	-	96	96.018	Macaca_nemestrina
ENSBTAG00000001078	SRL	57	88.053	ENSMLEG00000032156	SRL	96	87.692	Mandrillus_leucophaeus
ENSBTAG00000001078	SRL	56	72.848	ENSMAMG00000013756	SRL	53	72.747	Mastacembelus_armatus
ENSBTAG00000001078	SRL	56	83.900	ENSMAMG00000023322	srl	96	82.522	Mastacembelus_armatus
ENSBTAG00000001078	SRL	58	82.237	ENSMZEG00005004548	srl	98	83.073	Maylandia_zebra
ENSBTAG00000001078	SRL	62	66.538	ENSMZEG00005004010	SRL	57	72.467	Maylandia_zebra
ENSBTAG00000001078	SRL	66	74.320	ENSMGAG00000009342	SRL	95	92.308	Meleagris_gallopavo
ENSBTAG00000001078	SRL	99	74.793	ENSMICG00000032307	SRL	96	95.165	Microcebus_murinus
ENSBTAG00000001078	SRL	57	95.585	ENSMOCG00000008208	Srl	96	95.585	Microtus_ochrogaster
ENSBTAG00000001078	SRL	56	83.220	ENSMMOG00000013970	srl	98	83.220	Mola_mola
ENSBTAG00000001078	SRL	56	72.247	ENSMMOG00000021572	SRL	99	72.247	Mola_mola
ENSBTAG00000001078	SRL	79	87.791	ENSMODG00000016380	-	66	96.035	Monodelphis_domestica
ENSBTAG00000001078	SRL	56	83.447	ENSMALG00000005039	srl	98	83.447	Monopterus_albus
ENSBTAG00000001078	SRL	52	75.422	ENSMALG00000000670	SRL	97	74.458	Monopterus_albus
ENSBTAG00000001078	SRL	98	66.555	MGP_CAROLIEiJ_G0020400	Srl	96	96.247	Mus_caroli
ENSBTAG00000001078	SRL	98	66.221	ENSMUSG00000022519	Srl	96	96.247	Mus_musculus
ENSBTAG00000001078	SRL	98	64.466	MGP_PahariEiJ_G0016108	Srl	66	96.460	Mus_pahari
ENSBTAG00000001078	SRL	98	66.741	MGP_SPRETEiJ_G0021294	Srl	96	96.247	Mus_spretus
ENSBTAG00000001078	SRL	99	76.077	ENSMPUG00000015025	SRL	57	94.926	Mustela_putorius_furo
ENSBTAG00000001078	SRL	97	75.153	ENSMLUG00000030733	SRL	57	96.696	Myotis_lucifugus
ENSBTAG00000001078	SRL	57	96.026	ENSNGAG00000019741	Srl	96	96.026	Nannospalax_galili
ENSBTAG00000001078	SRL	59	68.548	ENSNBRG00000002422	SRL	56	73.660	Neolamprologus_brichardi
ENSBTAG00000001078	SRL	58	82.237	ENSNBRG00000023775	srl	97	82.237	Neolamprologus_brichardi
ENSBTAG00000001078	SRL	57	89.357	ENSNLEG00000029051	SRL	96	88.791	Nomascus_leucogenys
ENSBTAG00000001078	SRL	99	69.438	ENSOPRG00000000477	-	53	90.308	Ochotona_princeps
ENSBTAG00000001078	SRL	57	96.026	ENSODEG00000013256	SRL	96	96.026	Octodon_degus
ENSBTAG00000001078	SRL	58	82.198	ENSONIG00000005192	srl	96	82.198	Oreochromis_niloticus
ENSBTAG00000001078	SRL	99	67.101	ENSOCUG00000025140	SRL	79	97.357	Oryctolagus_cuniculus
ENSBTAG00000001078	SRL	57	81.898	ENSORLG00000008291	srl	91	86.269	Oryzias_latipes
ENSBTAG00000001078	SRL	99	51.519	ENSORLG00000015064	SRL	97	74.944	Oryzias_latipes
ENSBTAG00000001078	SRL	57	81.678	ENSORLG00020019784	srl	79	86.010	Oryzias_latipes_hni
ENSBTAG00000001078	SRL	56	75.169	ENSORLG00020018173	SRL	97	75.169	Oryzias_latipes_hni
ENSBTAG00000001078	SRL	56	75.395	ENSORLG00015019063	SRL	97	75.395	Oryzias_latipes_hsok
ENSBTAG00000001078	SRL	57	81.236	ENSORLG00015009342	srl	93	81.236	Oryzias_latipes_hsok
ENSBTAG00000001078	SRL	57	81.898	ENSOMEG00000010006	srl	97	83.371	Oryzias_melastigma
ENSBTAG00000001078	SRL	56	73.348	ENSOMEG00000005682	SRL	53	72.926	Oryzias_melastigma
ENSBTAG00000001078	SRL	97	72.068	ENSOGAG00000029266	SRL	55	95.595	Otolemur_garnettii
ENSBTAG00000001078	SRL	71	100.000	ENSOARG00000003074	SRL	74	100.000	Ovis_aries
ENSBTAG00000001078	SRL	97	72.443	ENSPPAG00000024919	-	99	96.744	Pan_paniscus
ENSBTAG00000001078	SRL	58	97.143	ENSPPRG00000010274	SRL	99	98.140	Panthera_pardus
ENSBTAG00000001078	SRL	58	97.143	ENSPTIG00000015162	SRL	99	98.140	Panthera_tigris_altaica
ENSBTAG00000001078	SRL	99	72.443	ENSPTRG00000007712	SRL	99	96.744	Pan_troglodytes
ENSBTAG00000001078	SRL	57	96.239	ENSPANG00000013804	SRL	97	96.239	Papio_anubis
ENSBTAG00000001078	SRL	56	76.644	ENSPKIG00000024974	SRL	88	76.644	Paramormyrops_kingsleyae
ENSBTAG00000001078	SRL	56	84.354	ENSPKIG00000006405	srl	93	84.354	Paramormyrops_kingsleyae
ENSBTAG00000001078	SRL	97	71.649	ENSPSIG00000008586	SRL	51	90.529	Pelodiscus_sinensis
ENSBTAG00000001078	SRL	56	72.562	ENSPMGG00000023505	-	99	71.847	Periophthalmus_magnuspinnatus
ENSBTAG00000001078	SRL	57	83.592	ENSPMGG00000021081	srl	97	83.592	Periophthalmus_magnuspinnatus
ENSBTAG00000001078	SRL	57	96.026	ENSPEMG00000015842	Srl	96	96.026	Peromyscus_maniculatus_bairdii
ENSBTAG00000001078	SRL	53	68.421	ENSPMAG00000004786	srl	100	67.506	Petromyzon_marinus
ENSBTAG00000001078	SRL	57	96.247	ENSPCIG00000012128	SRL	99	96.247	Phascolarctos_cinereus
ENSBTAG00000001078	SRL	57	80.000	ENSPFOG00000011408	srl	94	80.921	Poecilia_formosa
ENSBTAG00000001078	SRL	56	75.283	ENSPLAG00000002932	SRL	98	74.150	Poecilia_latipinna
ENSBTAG00000001078	SRL	57	82.262	ENSPLAG00000008017	srl	98	82.262	Poecilia_latipinna
ENSBTAG00000001078	SRL	59	70.204	ENSPMEG00000005890	SRL	62	71.882	Poecilia_mexicana
ENSBTAG00000001078	SRL	57	82.262	ENSPMEG00000006745	srl	98	82.262	Poecilia_mexicana
ENSBTAG00000001078	SRL	56	76.417	ENSPREG00000000315	SRL	98	75.283	Poecilia_reticulata
ENSBTAG00000001078	SRL	57	82.119	ENSPREG00000007751	srl	98	83.108	Poecilia_reticulata
ENSBTAG00000001078	SRL	53	97.362	ENSPPYG00000007053	SRL	97	97.362	Pongo_abelii
ENSBTAG00000001078	SRL	86	91.494	ENSPCAG00000003378	-	80	91.441	Procavia_capensis
ENSBTAG00000001078	SRL	58	94.945	ENSPCOG00000023135	SRL	99	96.279	Propithecus_coquereli
ENSBTAG00000001078	SRL	99	76.449	ENSPVAG00000006586	SRL	58	96.162	Pteropus_vampyrus
ENSBTAG00000001078	SRL	58	82.237	ENSPNYG00000001200	srl	98	83.073	Pundamilia_nyererei
ENSBTAG00000001078	SRL	62	66.538	ENSPNYG00000003423	SRL	56	72.467	Pundamilia_nyererei
ENSBTAG00000001078	SRL	56	82.207	ENSPNAG00000023106	srl	94	82.207	Pygocentrus_nattereri
ENSBTAG00000001078	SRL	56	75.510	ENSPNAG00000007361	-	91	75.510	Pygocentrus_nattereri
ENSBTAG00000001078	SRL	74	79.775	ENSRNOG00000005269	Srl	80	94.268	Rattus_norvegicus
ENSBTAG00000001078	SRL	99	68.106	ENSRBIG00000042358	SRL	80	96.247	Rhinopithecus_bieti
ENSBTAG00000001078	SRL	99	68.834	ENSSBOG00000029273	SRL	96	96.044	Saimiri_boliviensis_boliviensis
ENSBTAG00000001078	SRL	97	95.595	ENSSHAG00000011715	-	58	95.614	Sarcophilus_harrisii
ENSBTAG00000001078	SRL	61	73.389	ENSSFOG00015021327	SRL	52	75.269	Scleropages_formosus
ENSBTAG00000001078	SRL	56	84.354	ENSSFOG00015009773	srl	97	82.965	Scleropages_formosus
ENSBTAG00000001078	SRL	57	82.851	ENSSMAG00000016274	srl	98	82.851	Scophthalmus_maximus
ENSBTAG00000001078	SRL	56	72.807	ENSSMAG00000002232	SRL	50	71.806	Scophthalmus_maximus
ENSBTAG00000001078	SRL	56	74.107	ENSSDUG00000009161	SRL	98	74.107	Seriola_dumerili
ENSBTAG00000001078	SRL	56	83.900	ENSSDUG00000010808	srl	97	83.900	Seriola_dumerili
ENSBTAG00000001078	SRL	56	73.684	ENSSLDG00000014601	SRL	99	73.684	Seriola_lalandi_dorsalis
ENSBTAG00000001078	SRL	56	83.900	ENSSLDG00000022024	srl	95	83.900	Seriola_lalandi_dorsalis
ENSBTAG00000001078	SRL	57	90.287	ENSSPUG00000016859	SRL	99	90.287	Sphenodon_punctatus
ENSBTAG00000001078	SRL	56	84.580	ENSSPAG00000019105	srl	96	83.223	Stegastes_partitus
ENSBTAG00000001078	SRL	56	75.227	ENSSPAG00000014254	SRL	98	74.091	Stegastes_partitus
ENSBTAG00000001078	SRL	100	80.048	ENSSSCG00000007949	SRL	100	97.773	Sus_scrofa
ENSBTAG00000001078	SRL	58	90.132	ENSTGUG00000003951	-	100	90.132	Taeniopygia_guttata
ENSBTAG00000001078	SRL	57	82.119	ENSTRUG00000006005	srl	96	82.119	Takifugu_rubripes
ENSBTAG00000001078	SRL	53	75.721	ENSTRUG00000013310	SRL	55	75.120	Takifugu_rubripes
ENSBTAG00000001078	SRL	57	81.898	ENSTNIG00000009739	srl	96	81.898	Tetraodon_nigroviridis
ENSBTAG00000001078	SRL	78	98.182	ENSTTRG00000002709	-	67	98.182	Tursiops_truncatus
ENSBTAG00000001078	SRL	99	76.499	ENSUAMG00000005701	SRL	57	97.368	Ursus_americanus
ENSBTAG00000001078	SRL	81	79.136	ENSUMAG00000002574	SRL	56	97.149	Ursus_maritimus
ENSBTAG00000001078	SRL	98	77.833	ENSVVUG00000016331	-	51	97.192	Vulpes_vulpes
ENSBTAG00000001078	SRL	57	88.027	ENSXETG00000017313	srl	99	88.027	Xenopus_tropicalis
ENSBTAG00000001078	SRL	53	85.714	ENSXCOG00000010424	srl	96	85.714	Xiphophorus_couchianus
ENSBTAG00000001078	SRL	56	75.737	ENSXCOG00000014584	SRL	99	74.222	Xiphophorus_couchianus
ENSBTAG00000001078	SRL	59	70.492	ENSXMAG00000027598	SRL	64	72.516	Xiphophorus_maculatus
ENSBTAG00000001078	SRL	57	82.561	ENSXMAG00000004625	srl	92	82.561	Xiphophorus_maculatus