EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000001123 (Gene tree)
Gene ID: 513601
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 16047 bases
Position: chr23:47800492-47816538
Accession: 35072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000001494	zf-U11-48K	PF05253.12	8.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000001494	-	1082	-	ENSBTAP00000001494	340 (aa)	XP_002697643	E1B7L0

Gene Model

Click here to download ENSBTAG00000001123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000001123's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000001123	SNRNP48	100	86.471	ENSG00000168566	SNRNP48	100	86.176	Homo_sapiens
ENSBTAG00000001123	SNRNP48	96	43.323	ENSAPOG00000021430	snrnp48	92	43.323	Acanthochromis_polyacanthus
ENSBTAG00000001123	SNRNP48	99	85.345	ENSAMEG00000017349	SNRNP48	100	84.770	Ailuropoda_melanoleuca
ENSBTAG00000001123	SNRNP48	84	45.918	ENSACIG00000002032	snrnp48	91	40.841	Amphilophus_citrinellus
ENSBTAG00000001123	SNRNP48	77	47.253	ENSAOCG00000010562	snrnp48	91	42.433	Amphiprion_ocellaris
ENSBTAG00000001123	SNRNP48	77	46.863	ENSAPEG00000003231	snrnp48	91	42.090	Amphiprion_percula
ENSBTAG00000001123	SNRNP48	82	49.310	ENSATEG00000020210	snrnp48	80	48.929	Anabas_testudineus
ENSBTAG00000001123	SNRNP48	86	60.855	ENSACAG00000002811	SNRNP48	89	63.103	Anolis_carolinensis
ENSBTAG00000001123	SNRNP48	100	85.588	ENSANAG00000033538	SNRNP48	100	85.882	Aotus_nancymaae
ENSBTAG00000001123	SNRNP48	92	46.605	ENSAMXG00000015309	snrnp48	93	45.152	Astyanax_mexicanus
ENSBTAG00000001123	SNRNP48	100	86.471	ENSCJAG00000021330	SNRNP48	100	86.176	Callithrix_jacchus
ENSBTAG00000001123	SNRNP48	99	88.427	ENSCAFG00000009574	SNRNP48	83	87.278	Canis_familiaris
ENSBTAG00000001123	SNRNP48	99	88.166	ENSCAFG00020013203	SNRNP48	99	87.278	Canis_lupus_dingo
ENSBTAG00000001123	SNRNP48	100	97.353	ENSCHIG00000015216	SNRNP48	100	97.353	Capra_hircus
ENSBTAG00000001123	SNRNP48	100	86.176	ENSTSYG00000000698	SNRNP48	100	85.882	Carlito_syrichta
ENSBTAG00000001123	SNRNP48	91	82.143	ENSCAPG00000006768	SNRNP48	100	82.143	Cavia_aperea
ENSBTAG00000001123	SNRNP48	100	84.706	ENSCPOG00000007910	SNRNP48	100	84.412	Cavia_porcellus
ENSBTAG00000001123	SNRNP48	100	85.294	ENSCCAG00000035652	SNRNP48	100	85.000	Cebus_capucinus
ENSBTAG00000001123	SNRNP48	100	86.176	ENSCATG00000033947	SNRNP48	100	85.882	Cercocebus_atys
ENSBTAG00000001123	SNRNP48	100	85.000	ENSCLAG00000003765	SNRNP48	100	84.706	Chinchilla_lanigera
ENSBTAG00000001123	SNRNP48	100	87.059	ENSCSAG00000007409	SNRNP48	100	86.176	Chlorocebus_sabaeus
ENSBTAG00000001123	SNRNP48	84	64.238	ENSCPBG00000019146	SNRNP48	90	64.746	Chrysemys_picta_bellii
ENSBTAG00000001123	SNRNP48	100	86.471	ENSCANG00000030017	SNRNP48	100	86.176	Colobus_angolensis_palliatus
ENSBTAG00000001123	SNRNP48	100	83.529	ENSCGRG00001001076	-	100	82.353	Cricetulus_griseus_chok1gshd
ENSBTAG00000001123	SNRNP48	99	65.179	ENSCGRG00001008805	-	95	63.690	Cricetulus_griseus_chok1gshd
ENSBTAG00000001123	SNRNP48	100	83.529	ENSCGRG00000007781	Snrnp48	100	82.353	Cricetulus_griseus_crigri
ENSBTAG00000001123	SNRNP48	76	47.529	ENSCSEG00000000722	snrnp48	69	47.619	Cynoglossus_semilaevis
ENSBTAG00000001123	SNRNP48	93	45.482	ENSCVAG00000019829	snrnp48	74	46.959	Cyprinodon_variegatus
ENSBTAG00000001123	SNRNP48	81	45.775	ENSDARG00000039989	snrnp48	78	45.788	Danio_rerio
ENSBTAG00000001123	SNRNP48	99	86.866	ENSDNOG00000014978	SNRNP48	99	86.866	Dasypus_novemcinctus
ENSBTAG00000001123	SNRNP48	99	83.481	ENSDORG00000015140	Snrnp48	99	83.481	Dipodomys_ordii
ENSBTAG00000001123	SNRNP48	99	89.086	ENSEASG00005012021	SNRNP48	99	87.906	Equus_asinus_asinus
ENSBTAG00000001123	SNRNP48	100	89.412	ENSECAG00000026937	SNRNP48	100	88.235	Equus_caballus
ENSBTAG00000001123	SNRNP48	100	67.449	ENSEEUG00000015437	SNRNP48	99	66.276	Erinaceus_europaeus
ENSBTAG00000001123	SNRNP48	88	49.026	ENSELUG00000009766	snrnp48	92	44.379	Esox_lucius
ENSBTAG00000001123	SNRNP48	100	89.118	ENSFCAG00000018853	SNRNP48	100	89.118	Felis_catus
ENSBTAG00000001123	SNRNP48	85	65.436	ENSFALG00000007797	SNRNP48	92	66.782	Ficedula_albicollis
ENSBTAG00000001123	SNRNP48	99	86.136	ENSFDAG00000009231	SNRNP48	99	85.546	Fukomys_damarensis
ENSBTAG00000001123	SNRNP48	59	53.695	ENSFHEG00000014647	snrnp48	97	46.823	Fundulus_heteroclitus
ENSBTAG00000001123	SNRNP48	73	47.200	ENSGMOG00000018599	-	77	46.512	Gadus_morhua
ENSBTAG00000001123	SNRNP48	82	62.718	ENSGALG00000013005	SNRNP48	90	66.165	Gallus_gallus
ENSBTAG00000001123	SNRNP48	73	49.219	ENSGAFG00000021639	snrnp48	92	42.985	Gambusia_affinis
ENSBTAG00000001123	SNRNP48	72	50.806	ENSGACG00000017756	-	95	42.775	Gasterosteus_aculeatus
ENSBTAG00000001123	SNRNP48	84	63.333	ENSGAGG00000000865	SNRNP48	96	63.729	Gopherus_agassizii
ENSBTAG00000001123	SNRNP48	100	86.471	ENSGGOG00000013220	SNRNP48	100	86.176	Gorilla_gorilla
ENSBTAG00000001123	SNRNP48	76	46.768	ENSHBUG00000017066	snrnp48	96	40.390	Haplochromis_burtoni
ENSBTAG00000001123	SNRNP48	99	85.841	ENSHGLG00000015241	SNRNP48	100	85.294	Heterocephalus_glaber_female
ENSBTAG00000001123	SNRNP48	99	85.841	ENSHGLG00100010027	SNRNP48	100	85.294	Heterocephalus_glaber_male
ENSBTAG00000001123	SNRNP48	71	44.898	ENSHCOG00000014066	snrnp48	91	40.798	Hippocampus_comes
ENSBTAG00000001123	SNRNP48	100	88.235	ENSSTOG00000014635	SNRNP48	100	87.353	Ictidomys_tridecemlineatus
ENSBTAG00000001123	SNRNP48	100	81.176	ENSJJAG00000011495	Snrnp48	100	80.588	Jaculus_jaculus
ENSBTAG00000001123	SNRNP48	82	44.170	ENSKMAG00000016514	snrnp48	91	40.785	Kryptolebias_marmoratus
ENSBTAG00000001123	SNRNP48	81	47.687	ENSLBEG00000026249	snrnp48	91	43.491	Labrus_bergylta
ENSBTAG00000001123	SNRNP48	96	53.636	ENSLACG00000003958	SNRNP48	94	53.211	Latimeria_chalumnae
ENSBTAG00000001123	SNRNP48	84	52.069	ENSLOCG00000004187	snrnp48	92	50.765	Lepisosteus_oculatus
ENSBTAG00000001123	SNRNP48	100	84.118	ENSLAFG00000011152	SNRNP48	100	84.412	Loxodonta_africana
ENSBTAG00000001123	SNRNP48	100	86.765	ENSMFAG00000045216	SNRNP48	100	86.471	Macaca_fascicularis
ENSBTAG00000001123	SNRNP48	100	86.765	ENSMMUG00000014785	SNRNP48	100	86.471	Macaca_mulatta
ENSBTAG00000001123	SNRNP48	100	86.471	ENSMNEG00000042269	SNRNP48	100	86.176	Macaca_nemestrina
ENSBTAG00000001123	SNRNP48	100	86.765	ENSMLEG00000034004	SNRNP48	100	86.471	Mandrillus_leucophaeus
ENSBTAG00000001123	SNRNP48	77	47.037	ENSMAMG00000018673	snrnp48	80	42.515	Mastacembelus_armatus
ENSBTAG00000001123	SNRNP48	82	63.605	ENSMGAG00000006037	SNRNP48	99	63.699	Meleagris_gallopavo
ENSBTAG00000001123	SNRNP48	100	83.824	ENSMAUG00000011944	Snrnp48	100	82.941	Mesocricetus_auratus
ENSBTAG00000001123	SNRNP48	100	84.706	ENSMICG00000012497	SNRNP48	100	85.000	Microcebus_murinus
ENSBTAG00000001123	SNRNP48	100	83.824	ENSMOCG00000015555	Snrnp48	100	82.941	Microtus_ochrogaster
ENSBTAG00000001123	SNRNP48	54	51.613	ENSMMOG00000003072	-	58	51.613	Mola_mola
ENSBTAG00000001123	SNRNP48	99	68.986	ENSMODG00000009996	SNRNP48	93	68.986	Monodelphis_domestica
ENSBTAG00000001123	SNRNP48	81	48.387	ENSMALG00000005725	snrnp48	91	44.311	Monopterus_albus
ENSBTAG00000001123	SNRNP48	100	82.353	MGP_CAROLIEiJ_G0018441	Snrnp48	100	81.765	Mus_caroli
ENSBTAG00000001123	SNRNP48	100	82.647	ENSMUSG00000021431	Snrnp48	100	81.471	Mus_musculus
ENSBTAG00000001123	SNRNP48	100	82.941	MGP_PahariEiJ_G0019509	Snrnp48	100	81.765	Mus_pahari
ENSBTAG00000001123	SNRNP48	100	83.529	MGP_SPRETEiJ_G0019321	Snrnp48	100	82.353	Mus_spretus
ENSBTAG00000001123	SNRNP48	99	82.891	ENSNGAG00000004849	Snrnp48	99	82.301	Nannospalax_galili
ENSBTAG00000001123	SNRNP48	98	42.941	ENSNBRG00000012127	snrnp48	97	39.722	Neolamprologus_brichardi
ENSBTAG00000001123	SNRNP48	100	86.765	ENSNLEG00000011667	SNRNP48	100	86.471	Nomascus_leucogenys
ENSBTAG00000001123	SNRNP48	95	74.923	ENSOPRG00000015471	SNRNP48	99	74.303	Ochotona_princeps
ENSBTAG00000001123	SNRNP48	98	42.775	ENSONIG00000001520	snrnp48	97	40.000	Oreochromis_niloticus
ENSBTAG00000001123	SNRNP48	57	61.058	ENSOANG00000019888	-	94	61.538	Ornithorhynchus_anatinus
ENSBTAG00000001123	SNRNP48	84	86.411	ENSOCUG00000005168	SNRNP48	100	85.574	Oryctolagus_cuniculus
ENSBTAG00000001123	SNRNP48	87	46.885	ENSORLG00000015654	snrnp48	90	44.311	Oryzias_latipes
ENSBTAG00000001123	SNRNP48	87	46.230	ENSORLG00020015976	snrnp48	75	44.207	Oryzias_latipes_hni
ENSBTAG00000001123	SNRNP48	87	46.885	ENSORLG00015022379	snrnp48	77	44.910	Oryzias_latipes_hsok
ENSBTAG00000001123	SNRNP48	82	46.154	ENSOMEG00000022007	snrnp48	91	44.012	Oryzias_melastigma
ENSBTAG00000001123	SNRNP48	92	85.897	ENSOGAG00000005275	SNRNP48	92	85.621	Otolemur_garnettii
ENSBTAG00000001123	SNRNP48	84	95.470	ENSOARG00000017319	SNRNP48	99	95.406	Ovis_aries
ENSBTAG00000001123	SNRNP48	100	86.765	ENSPPAG00000032873	SNRNP48	100	86.471	Pan_paniscus
ENSBTAG00000001123	SNRNP48	100	89.412	ENSPPRG00000004283	SNRNP48	100	89.118	Panthera_pardus
ENSBTAG00000001123	SNRNP48	84	90.244	ENSPTIG00000013502	SNRNP48	99	90.813	Panthera_tigris_altaica
ENSBTAG00000001123	SNRNP48	100	86.765	ENSPTRG00000017703	SNRNP48	100	86.471	Pan_troglodytes
ENSBTAG00000001123	SNRNP48	100	86.765	ENSPANG00000000771	SNRNP48	100	86.471	Papio_anubis
ENSBTAG00000001123	SNRNP48	92	46.802	ENSPKIG00000013703	snrnp48	64	45.773	Paramormyrops_kingsleyae
ENSBTAG00000001123	SNRNP48	84	63.366	ENSPSIG00000002213	SNRNP48	92	64.068	Pelodiscus_sinensis
ENSBTAG00000001123	SNRNP48	76	45.926	ENSPMGG00000008120	snrnp48	85	46.964	Periophthalmus_magnuspinnatus
ENSBTAG00000001123	SNRNP48	100	84.412	ENSPEMG00000008872	Snrnp48	100	83.529	Peromyscus_maniculatus_bairdii
ENSBTAG00000001123	SNRNP48	73	49.402	ENSPFOG00000003578	snrnp48	92	43.881	Poecilia_formosa
ENSBTAG00000001123	SNRNP48	66	48.684	ENSPLAG00000002290	snrnp48	75	48.000	Poecilia_latipinna
ENSBTAG00000001123	SNRNP48	73	48.606	ENSPMEG00000018033	snrnp48	92	43.284	Poecilia_mexicana
ENSBTAG00000001123	SNRNP48	71	48.980	ENSPREG00000018541	snrnp48	92	44.179	Poecilia_reticulata
ENSBTAG00000001123	SNRNP48	100	85.294	ENSPPYG00000016209	SNRNP48	100	85.000	Pongo_abelii
ENSBTAG00000001123	SNRNP48	79	68.657	ENSPCAG00000011991	SNRNP48	99	69.030	Procavia_capensis
ENSBTAG00000001123	SNRNP48	100	85.882	ENSPVAG00000002854	SNRNP48	100	85.588	Pteropus_vampyrus
ENSBTAG00000001123	SNRNP48	93	42.991	ENSPNYG00000015399	snrnp48	100	42.813	Pundamilia_nyererei
ENSBTAG00000001123	SNRNP48	100	83.824	ENSRNOG00000013756	Snrnp48	100	82.941	Rattus_norvegicus
ENSBTAG00000001123	SNRNP48	91	85.852	ENSRBIG00000043856	SNRNP48	98	86.174	Rhinopithecus_bieti
ENSBTAG00000001123	SNRNP48	100	86.471	ENSRROG00000043229	SNRNP48	100	86.176	Rhinopithecus_roxellana
ENSBTAG00000001123	SNRNP48	100	86.176	ENSSBOG00000019486	SNRNP48	100	85.882	Saimiri_boliviensis_boliviensis
ENSBTAG00000001123	SNRNP48	99	68.768	ENSSHAG00000014483	SNRNP48	100	68.768	Sarcophilus_harrisii
ENSBTAG00000001123	SNRNP48	73	51.190	ENSSFOG00015006610	snrnp48	67	47.887	Scleropages_formosus
ENSBTAG00000001123	SNRNP48	88	45.545	ENSSDUG00000014953	snrnp48	91	42.308	Seriola_dumerili
ENSBTAG00000001123	SNRNP48	88	45.875	ENSSLDG00000005989	snrnp48	91	42.308	Seriola_lalandi_dorsalis
ENSBTAG00000001123	SNRNP48	84	62.752	ENSSPUG00000006257	SNRNP48	84	63.481	Sphenodon_punctatus
ENSBTAG00000001123	SNRNP48	71	47.561	ENSSPAG00000006454	snrnp48	92	41.667	Stegastes_partitus
ENSBTAG00000001123	SNRNP48	83	64.948	ENSTGUG00000007575	SNRNP48	92	65.278	Taeniopygia_guttata
ENSBTAG00000001123	SNRNP48	74	49.012	ENSTRUG00000007031	snrnp48	91	43.114	Takifugu_rubripes
ENSBTAG00000001123	SNRNP48	75	46.304	ENSTNIG00000012977	-	71	47.934	Tetraodon_nigroviridis
ENSBTAG00000001123	SNRNP48	100	71.261	ENSTBEG00000015620	SNRNP48	100	70.000	Tupaia_belangeri
ENSBTAG00000001123	SNRNP48	100	87.941	ENSTTRG00000016715	SNRNP48	100	87.059	Tursiops_truncatus
ENSBTAG00000001123	SNRNP48	100	88.235	ENSUAMG00000003690	SNRNP48	100	87.647	Ursus_americanus
ENSBTAG00000001123	SNRNP48	84	87.456	ENSVPAG00000003557	SNRNP48	99	87.633	Vicugna_pacos
ENSBTAG00000001123	SNRNP48	99	87.574	ENSVVUG00000004996	SNRNP48	99	86.686	Vulpes_vulpes
ENSBTAG00000001123	SNRNP48	86	52.492	ENSXETG00000020447	snrnp48	95	51.051	Xenopus_tropicalis
ENSBTAG00000001123	SNRNP48	66	48.908	ENSXCOG00000004478	snrnp48	91	41.033	Xiphophorus_couchianus
ENSBTAG00000001123	SNRNP48	73	49.402	ENSXMAG00000013595	snrnp48	92	44.478	Xiphophorus_maculatus