EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000001471 (Gene tree)
Gene ID: 534489
Gene Symbol: POC1A
Alias: -
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 100778 bases
Position: chr22:48705195-48805972
Accession: 50094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000068448	eIF2A	PF08662.11	1.1e-10	1	1
ENSBTAP00000001927	eIF2A	PF08662.11	3.2e-10	1	1
ENSBTAP00000072657	eIF2A	PF08662.11	3.9e-10	1	1
ENSBTAP00000062575	eIF2A	PF08662.11	1.4e-09	1	1
ENSBTAP00000070356	eIF2A	PF08662.11	1.4e-09	1	1
ENSBTAP00000070775	eIF2A	PF08662.11	1.4e-09	1	1
ENSBTAP00000071208	eIF2A	PF08662.11	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000076786	-	1600	-	ENSBTAP00000068448	374 (aa)	-	-
ENSBTAT00000067514	-	1422	-	ENSBTAP00000072657	399 (aa)	-	-
ENSBTAT00000069856	-	1399	-	ENSBTAP00000071208	369 (aa)	XP_015315075	UPI000383BC4C
ENSBTAT00000001927	-	1191	-	ENSBTAP00000001927	396 (aa)	-	Q2TBP4
ENSBTAT00000080034	-	2077	-	ENSBTAP00000070356	369 (aa)	XP_015315075	UPI000383BC4C
ENSBTAT00000070458	-	1507	-	ENSBTAP00000070775	369 (aa)	XP_015315075	UPI000383BC4C
ENSBTAT00000077428	-	1770	-	ENSBTAP00000062575	369 (aa)	XP_015315075	UPI000383BC4C

Gene Model

Click here to download ENSBTAG00000001471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000001471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000001471	POC1A	98	63.014	ENSBTAG00000000687	POC1B	98	60.870
ENSBTAG00000001471	POC1A	75	30.409	ENSBTAG00000007105	-	53	30.409
ENSBTAG00000001471	POC1A	75	30.337	ENSBTAG00000014366	PRPF19	56	31.944
ENSBTAG00000001471	POC1A	74	34.483	ENSBTAG00000006843	UTP15	53	32.636
ENSBTAG00000001471	POC1A	84	34.836	ENSBTAG00000047031	WDR5	91	35.341
ENSBTAG00000001471	POC1A	70	31.902	ENSBTAG00000015944	WDR61	97	30.159
ENSBTAG00000001471	POC1A	78	30.000	ENSBTAG00000004571	PRPF4	56	31.111
ENSBTAG00000001471	POC1A	88	34.677	ENSBTAG00000054326	WDR5B	74	34.677
ENSBTAG00000001471	POC1A	80	31.250	ENSBTAG00000019937	WDR3	62	30.128
ENSBTAG00000001471	POC1A	67	34.568	ENSBTAG00000021449	DCAF13	59	34.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000001471	POC1A	100	94.309	ENSG00000164087	POC1A	100	94.309	Homo_sapiens
ENSBTAG00000001471	POC1A	95	79.087	ENSAPOG00000002677	POC1A	98	79.443	Acanthochromis_polyacanthus
ENSBTAG00000001471	POC1A	100	93.767	ENSAMEG00000009136	POC1A	98	87.781	Ailuropoda_melanoleuca
ENSBTAG00000001471	POC1A	97	76.897	ENSACIG00000018288	poc1a	96	76.897	Amphilophus_citrinellus
ENSBTAG00000001471	POC1A	97	78.966	ENSAOCG00000001066	POC1A	97	69.466	Amphiprion_ocellaris
ENSBTAG00000001471	POC1A	97	70.799	ENSAPEG00000005795	poc1a	94	79.478	Amphiprion_percula
ENSBTAG00000001471	POC1A	99	78.533	ENSAPLG00000007756	POC1A	97	78.763	Anas_platyrhynchos
ENSBTAG00000001471	POC1A	100	92.954	ENSANAG00000030897	POC1A	97	92.954	Aotus_nancymaae
ENSBTAG00000001471	POC1A	95	78.621	ENSACLG00000017869	POC1A	98	70.321	Astatotilapia_calliptera
ENSBTAG00000001471	POC1A	77	80.071	ENSAMXG00000024703	poc1a	85	80.727	Astyanax_mexicanus
ENSBTAG00000001471	POC1A	100	92.683	ENSCJAG00000005972	POC1A	97	92.761	Callithrix_jacchus
ENSBTAG00000001471	POC1A	100	87.532	ENSCAFG00020022379	POC1A	100	87.532	Canis_lupus_dingo
ENSBTAG00000001471	POC1A	100	98.645	ENSCHIG00000002571	POC1A	98	98.660	Capra_hircus
ENSBTAG00000001471	POC1A	100	93.496	ENSTSYG00000008302	POC1A	100	86.978	Carlito_syrichta
ENSBTAG00000001471	POC1A	90	84.457	ENSCAPG00000016201	POC1A	89	84.457	Cavia_aperea
ENSBTAG00000001471	POC1A	100	89.431	ENSCPOG00000006740	POC1A	98	89.544	Cavia_porcellus
ENSBTAG00000001471	POC1A	100	93.496	ENSCCAG00000023380	POC1A	97	93.566	Cebus_capucinus
ENSBTAG00000001471	POC1A	100	93.850	ENSCATG00000021822	POC1A	100	93.850	Cercocebus_atys
ENSBTAG00000001471	POC1A	99	85.640	ENSCLAG00000010593	POC1A	99	85.640	Chinchilla_lanigera
ENSBTAG00000001471	POC1A	100	93.225	ENSCSAG00000013862	POC1A	100	93.225	Chlorocebus_sabaeus
ENSBTAG00000001471	POC1A	75	87.085	ENSCPBG00000016728	POC1A	98	87.085	Chrysemys_picta_bellii
ENSBTAG00000001471	POC1A	99	64.674	ENSCSAVG00000008477	-	99	64.785	Ciona_savignyi
ENSBTAG00000001471	POC1A	99	93.207	ENSCANG00000033064	POC1A	99	93.207	Colobus_angolensis_palliatus
ENSBTAG00000001471	POC1A	99	89.646	ENSCGRG00001007357	Poc1a	97	89.757	Cricetulus_griseus_chok1gshd
ENSBTAG00000001471	POC1A	96	74.483	ENSCSEG00000010287	POC1A	93	67.895	Cynoglossus_semilaevis
ENSBTAG00000001471	POC1A	97	77.700	ENSCVAG00000015594	POC1A	97	77.700	Cyprinodon_variegatus
ENSBTAG00000001471	POC1A	98	69.283	ENSEBUG00000002614	POC1A	94	69.283	Eptatretus_burgeri
ENSBTAG00000001471	POC1A	72	58.333	ENSEBUG00000008246	POC1A	55	58.333	Eptatretus_burgeri
ENSBTAG00000001471	POC1A	76	62.238	ENSEBUG00000008013	poc1a	83	62.238	Eptatretus_burgeri
ENSBTAG00000001471	POC1A	98	69.589	ENSELUG00000015504	poc1a	97	68.984	Esox_lucius
ENSBTAG00000001471	POC1A	100	94.309	ENSFCAG00000015704	POC1A	98	94.370	Felis_catus
ENSBTAG00000001471	POC1A	99	75.068	ENSFALG00000008922	POC1A	99	72.525	Ficedula_albicollis
ENSBTAG00000001471	POC1A	100	91.328	ENSFDAG00000011606	POC1A	99	86.035	Fukomys_damarensis
ENSBTAG00000001471	POC1A	96	77.352	ENSFHEG00000015504	POC1A	96	69.672	Fundulus_heteroclitus
ENSBTAG00000001471	POC1A	99	75.137	ENSGALG00000034572	-	99	74.054	Gallus_gallus
ENSBTAG00000001471	POC1A	98	69.459	ENSGACG00000007015	poc1a	98	66.339	Gasterosteus_aculeatus
ENSBTAG00000001471	POC1A	99	77.778	ENSGAGG00000014637	POC1A	99	74.752	Gopherus_agassizii
ENSBTAG00000001471	POC1A	100	94.038	ENSGGOG00000006652	POC1A	100	87.224	Gorilla_gorilla
ENSBTAG00000001471	POC1A	100	90.786	ENSHGLG00000013436	POC1A	100	85.027	Heterocephalus_glaber_female
ENSBTAG00000001471	POC1A	100	90.786	ENSHGLG00100003479	POC1A	100	84.767	Heterocephalus_glaber_male
ENSBTAG00000001471	POC1A	97	72.507	ENSIPUG00000001227	POC1A	95	72.507	Ictalurus_punctatus
ENSBTAG00000001471	POC1A	100	91.057	ENSSTOG00000002638	POC1A	100	84.275	Ictidomys_tridecemlineatus
ENSBTAG00000001471	POC1A	100	91.057	ENSJJAG00000018739	Poc1a	99	86.035	Jaculus_jaculus
ENSBTAG00000001471	POC1A	98	82.979	ENSLBEG00000016119	POC1A	96	55.012	Labrus_bergylta
ENSBTAG00000001471	POC1A	100	68.170	ENSLACG00000018788	POC1A	92	80.069	Latimeria_chalumnae
ENSBTAG00000001471	POC1A	98	73.670	ENSLOCG00000013801	poc1a	97	82.474	Lepisosteus_oculatus
ENSBTAG00000001471	POC1A	99	82.703	ENSLAFG00000028434	POC1A	98	87.266	Loxodonta_africana
ENSBTAG00000001471	POC1A	100	92.683	ENSMFAG00000001970	POC1A	100	92.683	Macaca_fascicularis
ENSBTAG00000001471	POC1A	100	92.683	ENSMMUG00000012485	POC1A	97	92.761	Macaca_mulatta
ENSBTAG00000001471	POC1A	100	92.412	ENSMNEG00000042811	POC1A	100	92.412	Macaca_nemestrina
ENSBTAG00000001471	POC1A	100	92.683	ENSMLEG00000039574	POC1A	100	92.683	Mandrillus_leucophaeus
ENSBTAG00000001471	POC1A	95	78.327	ENSMAMG00000014233	POC1A	98	62.763	Mastacembelus_armatus
ENSBTAG00000001471	POC1A	95	78.621	ENSMZEG00005013503	POC1A	97	61.697	Maylandia_zebra
ENSBTAG00000001471	POC1A	99	83.221	ENSMGAG00000001628	POC1A	99	83.221	Meleagris_gallopavo
ENSBTAG00000001471	POC1A	99	90.463	ENSMAUG00000017403	Poc1a	97	90.566	Mesocricetus_auratus
ENSBTAG00000001471	POC1A	100	93.225	ENSMICG00000002709	POC1A	100	86.631	Microcebus_murinus
ENSBTAG00000001471	POC1A	92	90.882	ENSMOCG00000003396	Poc1a	97	91.496	Microtus_ochrogaster
ENSBTAG00000001471	POC1A	97	69.542	ENSMMOG00000010427	poc1a	93	69.542	Mola_mola
ENSBTAG00000001471	POC1A	91	78.635	ENSMODG00000011717	POC1A	96	75.068	Monodelphis_domestica
ENSBTAG00000001471	POC1A	97	70.219	ENSMALG00000009054	poc1a	93	70.219	Monopterus_albus
ENSBTAG00000001471	POC1A	100	90.244	MGP_CAROLIEiJ_G0032617	Poc1a	98	90.349	Mus_caroli
ENSBTAG00000001471	POC1A	100	89.973	ENSMUSG00000023345	Poc1a	100	89.973	Mus_musculus
ENSBTAG00000001471	POC1A	100	89.973	MGP_PahariEiJ_G0015485	Poc1a	98	90.080	Mus_pahari
ENSBTAG00000001471	POC1A	100	89.973	MGP_SPRETEiJ_G0033763	Poc1a	98	90.080	Mus_spretus
ENSBTAG00000001471	POC1A	100	93.496	ENSMPUG00000011723	POC1A	98	93.566	Mustela_putorius_furo
ENSBTAG00000001471	POC1A	100	92.412	ENSMLUG00000015092	POC1A	90	92.493	Myotis_lucifugus
ENSBTAG00000001471	POC1A	100	92.954	ENSNGAG00000005212	Poc1a	100	85.222	Nannospalax_galili
ENSBTAG00000001471	POC1A	99	66.234	ENSNBRG00000022135	poc1a	97	66.324	Neolamprologus_brichardi
ENSBTAG00000001471	POC1A	100	93.225	ENSNLEG00000007084	POC1A	100	93.225	Nomascus_leucogenys
ENSBTAG00000001471	POC1A	86	100.000	ENSMEUG00000007715	-	79	100.000	Notamacropus_eugenii
ENSBTAG00000001471	POC1A	100	89.160	ENSOPRG00000008831	POC1A	91	89.247	Ochotona_princeps
ENSBTAG00000001471	POC1A	100	90.027	ENSODEG00000018290	POC1A	99	90.027	Octodon_degus
ENSBTAG00000001471	POC1A	98	77.586	ENSONIG00000014378	POC1A	98	77.586	Oreochromis_niloticus
ENSBTAG00000001471	POC1A	100	91.328	ENSOCUG00000002080	POC1A	100	91.328	Oryctolagus_cuniculus
ENSBTAG00000001471	POC1A	97	69.592	ENSOMEG00000019834	POC1A	96	69.592	Oryzias_melastigma
ENSBTAG00000001471	POC1A	100	85.484	ENSOGAG00000032245	POC1A	99	79.404	Otolemur_garnettii
ENSBTAG00000001471	POC1A	100	98.374	ENSOARG00000006352	POC1A	98	98.391	Ovis_aries
ENSBTAG00000001471	POC1A	100	94.038	ENSPPAG00000043583	POC1A	100	94.038	Pan_paniscus
ENSBTAG00000001471	POC1A	100	94.309	ENSPPRG00000003365	POC1A	98	94.370	Panthera_pardus
ENSBTAG00000001471	POC1A	100	94.309	ENSPTIG00000005388	POC1A	100	94.309	Panthera_tigris_altaica
ENSBTAG00000001471	POC1A	100	94.309	ENSPTRG00000014989	POC1A	100	94.309	Pan_troglodytes
ENSBTAG00000001471	POC1A	78	86.942	ENSPSIG00000014809	POC1A	86	85.053	Pelodiscus_sinensis
ENSBTAG00000001471	POC1A	97	69.359	ENSPMGG00000005356	poc1a	96	67.914	Periophthalmus_magnuspinnatus
ENSBTAG00000001471	POC1A	91	90.504	ENSPEMG00000024131	Poc1a	97	93.515	Peromyscus_maniculatus_bairdii
ENSBTAG00000001471	POC1A	98	62.233	ENSPMAG00000000333	poc1a	98	79.514	Petromyzon_marinus
ENSBTAG00000001471	POC1A	99	79.726	ENSPCIG00000018160	POC1A	99	77.556	Phascolarctos_cinereus
ENSBTAG00000001471	POC1A	100	93.496	ENSPPYG00000013816	POC1A	97	93.566	Pongo_abelii
ENSBTAG00000001471	POC1A	100	88.076	ENSPCAG00000002118	POC1A	98	88.204	Procavia_capensis
ENSBTAG00000001471	POC1A	100	92.954	ENSPCOG00000012625	POC1A	100	92.954	Propithecus_coquereli
ENSBTAG00000001471	POC1A	100	71.545	ENSPVAG00000012480	POC1A	93	70.899	Pteropus_vampyrus
ENSBTAG00000001471	POC1A	99	70.811	ENSPNYG00000019517	poc1a	98	69.095	Pundamilia_nyererei
ENSBTAG00000001471	POC1A	99	70.483	ENSPNAG00000007556	POC1A	94	70.483	Pygocentrus_nattereri
ENSBTAG00000001471	POC1A	100	86.757	ENSRNOG00000037295	Poc1a	100	86.757	Rattus_norvegicus
ENSBTAG00000001471	POC1A	100	92.954	ENSRBIG00000031748	POC1A	100	92.954	Rhinopithecus_bieti
ENSBTAG00000001471	POC1A	100	92.954	ENSRROG00000044472	POC1A	100	92.954	Rhinopithecus_roxellana
ENSBTAG00000001471	POC1A	100	93.496	ENSSBOG00000027902	POC1A	100	93.496	Saimiri_boliviensis_boliviensis
ENSBTAG00000001471	POC1A	95	77.444	ENSSMAG00000013505	POC1A	96	78.049	Scophthalmus_maximus
ENSBTAG00000001471	POC1A	94	78.276	ENSSDUG00000016161	POC1A	97	78.276	Seriola_dumerili
ENSBTAG00000001471	POC1A	94	77.931	ENSSLDG00000003828	POC1A	97	77.931	Seriola_lalandi_dorsalis
ENSBTAG00000001471	POC1A	90	83.673	ENSSPUG00000008656	POC1A	99	83.203	Sphenodon_punctatus
ENSBTAG00000001471	POC1A	98	57.825	ENSSPAG00000020330	POC1A	93	56.642	Stegastes_partitus
ENSBTAG00000001471	POC1A	100	95.664	ENSSSCG00000011426	POC1A	92	95.710	Sus_scrofa
ENSBTAG00000001471	POC1A	99	74.185	ENSTGUG00000006036	POC1A	98	74.194	Taeniopygia_guttata
ENSBTAG00000001471	POC1A	95	64.444	ENSTRUG00000007900	POC1A	96	64.444	Takifugu_rubripes
ENSBTAG00000001471	POC1A	97	62.500	ENSTNIG00000014818	POC1A	99	62.500	Tetraodon_nigroviridis
ENSBTAG00000001471	POC1A	100	91.870	ENSTTRG00000016798	POC1A	100	85.995	Tursiops_truncatus
ENSBTAG00000001471	POC1A	100	93.496	ENSUAMG00000020816	POC1A	96	95.156	Ursus_americanus
ENSBTAG00000001471	POC1A	100	93.496	ENSUMAG00000021482	POC1A	100	93.496	Ursus_maritimus
ENSBTAG00000001471	POC1A	96	79.505	ENSXETG00000010813	poc1a	98	79.505	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000922	spindle pole	-	ISS	Component
GO:0005814	centriole	-	ISS	Component
GO:0030030	cell projection organization	-	IEA	Process
GO:0036064	ciliary basal body	-	ISS	Component