EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000001790 (Gene tree)
Gene ID: 100300349
Gene Symbol: SAFB2
Alias: -
Full Name: Bos taurus scaffold attachment factor B2 (SAFB2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 28896 bases
Position: chr7:18682927-18711822
Accession: NM_001256554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000042180	RRM_1	PF00076.22	7.4e-14	1	1
ENSBTAP00000042180	SAP	PF02037.27	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000044703	-	3183	-	ENSBTAP00000042180	948 (aa)	-	E1BDE7

Gene Model

Click here to download ENSBTAG00000001790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000001790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000001790	SAFB2	98	68.319	ENSBTAG00000007875	SAFB	100	63.295

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000001790	SAFB2	99	84.509	ENSG00000130254	SAFB2	100	84.067	Homo_sapiens
ENSBTAG00000001790	SAFB2	100	86.268	ENSAMEG00000012146	SAFB2	100	82.780	Ailuropoda_melanoleuca
ENSBTAG00000001790	SAFB2	99	85.363	ENSANAG00000031936	SAFB2	100	84.906	Aotus_nancymaae
ENSBTAG00000001790	SAFB2	99	89.530	ENSCAFG00000018814	SAFB2	100	88.994	Canis_familiaris
ENSBTAG00000001790	SAFB2	99	89.530	ENSCAFG00020018939	SAFB2	100	88.994	Canis_lupus_dingo
ENSBTAG00000001790	SAFB2	100	97.679	ENSCHIG00000024547	SAFB2	100	97.679	Capra_hircus
ENSBTAG00000001790	SAFB2	91	62.195	ENSCAPG00000011771	SAFB2	100	63.457	Cavia_aperea
ENSBTAG00000001790	SAFB2	99	74.247	ENSCPOG00000011394	SAFB2	100	73.904	Cavia_porcellus
ENSBTAG00000001790	SAFB2	99	84.722	ENSCCAG00000017348	SAFB2	100	84.454	Cebus_capucinus
ENSBTAG00000001790	SAFB2	99	83.636	ENSCATG00000039497	SAFB2	100	83.211	Cercocebus_atys
ENSBTAG00000001790	SAFB2	99	84.402	ENSCSAG00000009959	SAFB2	100	83.962	Chlorocebus_sabaeus
ENSBTAG00000001790	SAFB2	74	75.000	ENSCHOG00000010684	SAFB2	100	75.282	Choloepus_hoffmanni
ENSBTAG00000001790	SAFB2	99	81.197	ENSCANG00000024675	SAFB2	100	80.818	Colobus_angolensis_palliatus
ENSBTAG00000001790	SAFB2	100	66.633	ENSCGRG00001015833	Safb2	100	66.532	Cricetulus_griseus_chok1gshd
ENSBTAG00000001790	SAFB2	100	66.633	ENSCGRG00000011131	Safb2	100	66.532	Cricetulus_griseus_crigri
ENSBTAG00000001790	SAFB2	95	73.210	ENSDORG00000016199	Safb2	100	73.102	Dipodomys_ordii
ENSBTAG00000001790	SAFB2	88	82.318	ENSEASG00005022952	SAFB2	91	82.318	Equus_asinus_asinus
ENSBTAG00000001790	SAFB2	99	83.316	ENSECAG00000018978	SAFB2	100	84.257	Equus_caballus
ENSBTAG00000001790	SAFB2	99	88.128	ENSFCAG00000011834	SAFB2	100	87.828	Felis_catus
ENSBTAG00000001790	SAFB2	92	79.305	ENSFDAG00000020009	SAFB2	98	79.516	Fukomys_damarensis
ENSBTAG00000001790	SAFB2	99	81.104	ENSGGOG00000015093	SAFB2	100	79.062	Gorilla_gorilla
ENSBTAG00000001790	SAFB2	100	80.248	ENSHGLG00000017442	SAFB2	100	80.805	Heterocephalus_glaber_female
ENSBTAG00000001790	SAFB2	99	81.138	ENSLAFG00000003836	SAFB2	100	79.874	Loxodonta_africana
ENSBTAG00000001790	SAFB2	99	84.509	ENSMFAG00000039706	SAFB2	100	84.067	Macaca_fascicularis
ENSBTAG00000001790	SAFB2	99	84.829	ENSMMUG00000017968	SAFB2	100	84.382	Macaca_mulatta
ENSBTAG00000001790	SAFB2	99	78.830	ENSMNEG00000032042	SAFB2	100	78.274	Macaca_nemestrina
ENSBTAG00000001790	SAFB2	99	84.722	ENSMLEG00000034562	SAFB2	100	84.277	Mandrillus_leucophaeus
ENSBTAG00000001790	SAFB2	81	71.579	ENSMAUG00000011573	Safb2	94	71.404	Mesocricetus_auratus
ENSBTAG00000001790	SAFB2	99	84.706	ENSMICG00000008711	SAFB2	100	84.084	Microcebus_murinus
ENSBTAG00000001790	SAFB2	100	67.072	ENSMOCG00000006827	Safb2	100	66.971	Microtus_ochrogaster
ENSBTAG00000001790	SAFB2	98	70.276	ENSMODG00000001178	SAFB2	100	69.792	Monodelphis_domestica
ENSBTAG00000001790	SAFB2	99	67.238	MGP_CAROLIEiJ_G0021779	Safb2	99	66.129	Mus_caroli
ENSBTAG00000001790	SAFB2	99	67.608	ENSMUSG00000042625	Safb2	99	67.508	Mus_musculus
ENSBTAG00000001790	SAFB2	100	67.068	MGP_PahariEiJ_G0020768	Safb2	100	66.968	Mus_pahari
ENSBTAG00000001790	SAFB2	100	61.450	MGP_SPRETEiJ_G0022690	Safb2	100	58.938	Mus_spretus
ENSBTAG00000001790	SAFB2	100	87.500	ENSMPUG00000006106	SAFB2	93	87.500	Mustela_putorius_furo
ENSBTAG00000001790	SAFB2	100	83.264	ENSMLUG00000001050	SAFB2	100	81.393	Myotis_lucifugus
ENSBTAG00000001790	SAFB2	99	83.226	ENSNLEG00000013514	SAFB2	100	82.809	Nomascus_leucogenys
ENSBTAG00000001790	SAFB2	93	66.817	ENSMEUG00000002456	SAFB2	100	66.367	Notamacropus_eugenii
ENSBTAG00000001790	SAFB2	99	70.607	ENSOPRG00000011523	-	100	70.386	Ochotona_princeps
ENSBTAG00000001790	SAFB2	100	76.458	ENSODEG00000014751	SAFB2	100	76.458	Octodon_degus
ENSBTAG00000001790	SAFB2	99	82.711	ENSOGAG00000006855	SAFB2	100	81.990	Otolemur_garnettii
ENSBTAG00000001790	SAFB2	98	85.774	ENSOARG00000007982	SAFB2	67	97.573	Ovis_aries
ENSBTAG00000001790	SAFB2	99	84.722	ENSPPAG00000043392	SAFB2	100	84.277	Pan_paniscus
ENSBTAG00000001790	SAFB2	99	88.021	ENSPPRG00000011310	SAFB2	100	87.723	Panthera_pardus
ENSBTAG00000001790	SAFB2	80	89.855	ENSPTIG00000015120	SAFB2	90	89.855	Panthera_tigris_altaica
ENSBTAG00000001790	SAFB2	99	79.060	ENSPTRG00000010334	SAFB2	100	78.512	Pan_troglodytes
ENSBTAG00000001790	SAFB2	99	84.615	ENSPANG00000007004	SAFB2	100	84.172	Papio_anubis
ENSBTAG00000001790	SAFB2	100	65.265	ENSPEMG00000016015	Safb2	100	65.165	Peromyscus_maniculatus_bairdii
ENSBTAG00000001790	SAFB2	64	72.488	ENSPCIG00000009518	-	99	75.646	Phascolarctos_cinereus
ENSBTAG00000001790	SAFB2	99	85.043	ENSPPYG00000009427	SAFB2	100	84.486	Pongo_abelii
ENSBTAG00000001790	SAFB2	100	79.686	ENSPCAG00000006352	SAFB2	100	80.209	Procavia_capensis
ENSBTAG00000001790	SAFB2	99	81.283	ENSPCOG00000023260	SAFB2	100	79.748	Propithecus_coquereli
ENSBTAG00000001790	SAFB2	58	86.343	ENSPVAG00000004902	-	61	86.343	Pteropus_vampyrus
ENSBTAG00000001790	SAFB2	82	66.789	ENSRNOG00000049511	AABR07066522.1	99	64.957	Rattus_norvegicus
ENSBTAG00000001790	SAFB2	81	87.004	ENSRBIG00000033446	SAFB2	99	86.189	Rhinopithecus_bieti
ENSBTAG00000001790	SAFB2	99	84.936	ENSRROG00000006606	SAFB2	100	84.486	Rhinopithecus_roxellana
ENSBTAG00000001790	SAFB2	99	83.226	ENSSBOG00000032315	SAFB2	100	85.050	Saimiri_boliviensis_boliviensis
ENSBTAG00000001790	SAFB2	98	70.601	ENSSHAG00000012703	SAFB2	100	69.360	Sarcophilus_harrisii
ENSBTAG00000001790	SAFB2	80	75.297	ENSSARG00000000649	SAFB2	100	73.806	Sorex_araneus
ENSBTAG00000001790	SAFB2	99	91.453	ENSSSCG00000013523	SAFB2	100	90.461	Sus_scrofa
ENSBTAG00000001790	SAFB2	77	77.652	ENSTBEG00000012709	SAFB2	86	77.652	Tupaia_belangeri
ENSBTAG00000001790	SAFB2	93	85.473	ENSTTRG00000013585	SAFB2	93	85.135	Tursiops_truncatus
ENSBTAG00000001790	SAFB2	99	89.198	ENSUAMG00000024695	SAFB2	99	88.620	Ursus_americanus
ENSBTAG00000001790	SAFB2	82	90.361	ENSUMAG00000009585	SAFB2	83	90.361	Ursus_maritimus
ENSBTAG00000001790	SAFB2	74	87.435	ENSVPAG00000012041	SAFB2	88	87.432	Vicugna_pacos
ENSBTAG00000001790	SAFB2	99	89.637	ENSVVUG00000013695	SAFB2	100	89.099	Vulpes_vulpes