EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000001939 (Gene tree)
Gene ID: 511202
Gene Symbol: SECISBP2
Alias: -
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 33680 bases
Position: chr8:88755737-88789416
Accession: 34419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000070727	Ribosomal_L7Ae	PF01248.26	3.4e-21	1	1
ENSBTAP00000063334	Ribosomal_L7Ae	PF01248.26	3.7e-21	1	1
ENSBTAP00000071819	Ribosomal_L7Ae	PF01248.26	3.9e-21	1	1
ENSBTAP00000002523	Ribosomal_L7Ae	PF01248.26	4.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000068057	-	2314	-	ENSBTAP00000070727	718 (aa)	XP_024852058	UPI000D537524
ENSBTAT00000002523	-	2692	-	ENSBTAP00000002523	844 (aa)	XP_002689905	E1BMA4
ENSBTAT00000079232	-	637	-	ENSBTAP00000058184	114 (aa)	-	-
ENSBTAT00000070951	-	2572	-	ENSBTAP00000071819	804 (aa)	XP_005210526	UPI000383F4C5
ENSBTAT00000071393	-	2404	-	ENSBTAP00000063334	748 (aa)	XP_005210527	UPI000383F5D7

Gene Model

Click here to download ENSBTAG00000001939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000001939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000001939	SECISBP2	55	45.476	ENSG00000138593	SECISBP2L	58	47.581	Homo_sapiens
ENSBTAG00000001939	SECISBP2	100	80.000	ENSG00000187742	SECISBP2	100	76.539	Homo_sapiens
ENSBTAG00000001939	SECISBP2	56	53.738	ENSAPOG00000005939	secisbp2	60	49.796	Acanthochromis_polyacanthus
ENSBTAG00000001939	SECISBP2	99	79.276	ENSAMEG00000003349	SECISBP2	99	74.144	Ailuropoda_melanoleuca
ENSBTAG00000001939	SECISBP2	57	50.971	ENSACIG00000024185	secisbp2	82	50.971	Amphilophus_citrinellus
ENSBTAG00000001939	SECISBP2	60	51.410	ENSAOCG00000019052	secisbp2	61	49.697	Amphiprion_ocellaris
ENSBTAG00000001939	SECISBP2	60	50.976	ENSAPEG00000012971	secisbp2	61	49.293	Amphiprion_percula
ENSBTAG00000001939	SECISBP2	60	50.993	ENSATEG00000001095	secisbp2	79	43.098	Anabas_testudineus
ENSBTAG00000001939	SECISBP2	96	53.307	ENSAPLG00000013053	SECISBP2	100	42.339	Anas_platyrhynchos
ENSBTAG00000001939	SECISBP2	83	63.435	ENSACAG00000016594	SECISBP2	94	43.171	Anolis_carolinensis
ENSBTAG00000001939	SECISBP2	100	78.788	ENSANAG00000028208	SECISBP2	100	75.029	Aotus_nancymaae
ENSBTAG00000001939	SECISBP2	56	53.269	ENSACLG00000019976	secisbp2	62	49.084	Astatotilapia_calliptera
ENSBTAG00000001939	SECISBP2	52	50.790	ENSAMXG00000015953	secisbp2	62	49.595	Astyanax_mexicanus
ENSBTAG00000001939	SECISBP2	100	79.798	ENSCJAG00000007806	SECISBP2	100	75.145	Callithrix_jacchus
ENSBTAG00000001939	SECISBP2	100	77.299	ENSCAFG00000002188	SECISBP2	100	77.299	Canis_familiaris
ENSBTAG00000001939	SECISBP2	99	81.928	ENSCAFG00020007224	SECISBP2	99	77.450	Canis_lupus_dingo
ENSBTAG00000001939	SECISBP2	100	97.719	ENSCHIG00000010657	SECISBP2	99	96.682	Capra_hircus
ENSBTAG00000001939	SECISBP2	87	72.435	ENSTSYG00000014119	SECISBP2	97	70.773	Carlito_syrichta
ENSBTAG00000001939	SECISBP2	93	54.442	ENSCAPG00000008522	SECISBP2	99	75.000	Cavia_aperea
ENSBTAG00000001939	SECISBP2	99	77.374	ENSCPOG00000014270	SECISBP2	100	71.445	Cavia_porcellus
ENSBTAG00000001939	SECISBP2	100	80.242	ENSCCAG00000013350	SECISBP2	100	75.754	Cebus_capucinus
ENSBTAG00000001939	SECISBP2	100	79.596	ENSCATG00000008304	SECISBP2	100	76.190	Cercocebus_atys
ENSBTAG00000001939	SECISBP2	99	78.916	ENSCLAG00000001166	SECISBP2	96	72.422	Chinchilla_lanigera
ENSBTAG00000001939	SECISBP2	100	80.040	ENSCSAG00000007310	SECISBP2	100	76.566	Chlorocebus_sabaeus
ENSBTAG00000001939	SECISBP2	85	78.788	ENSCHOG00000011084	SECISBP2	83	78.788	Choloepus_hoffmanni
ENSBTAG00000001939	SECISBP2	57	59.629	ENSCPBG00000005608	SECISBP2	99	53.021	Chrysemys_picta_bellii
ENSBTAG00000001939	SECISBP2	91	79.596	ENSCANG00000034551	SECISBP2	100	75.884	Colobus_angolensis_palliatus
ENSBTAG00000001939	SECISBP2	100	73.501	ENSCGRG00001013930	Secisbp2	100	66.125	Cricetulus_griseus_chok1gshd
ENSBTAG00000001939	SECISBP2	100	73.501	ENSCGRG00000002600	Secisbp2	100	66.125	Cricetulus_griseus_crigri
ENSBTAG00000001939	SECISBP2	59	50.545	ENSCVAG00000015876	secisbp2	60	50.993	Cyprinodon_variegatus
ENSBTAG00000001939	SECISBP2	61	48.065	ENSDARG00000073892	secisbp2	85	48.460	Danio_rerio
ENSBTAG00000001939	SECISBP2	100	78.138	ENSDNOG00000009432	SECISBP2	100	75.174	Dasypus_novemcinctus
ENSBTAG00000001939	SECISBP2	100	78.112	ENSDORG00000023182	Secisbp2	100	72.948	Dipodomys_ordii
ENSBTAG00000001939	SECISBP2	91	70.398	ENSETEG00000001262	SECISBP2	92	66.667	Echinops_telfairi
ENSBTAG00000001939	SECISBP2	100	82.626	ENSEASG00005013960	SECISBP2	100	79.391	Equus_asinus_asinus
ENSBTAG00000001939	SECISBP2	100	82.626	ENSECAG00000015868	SECISBP2	100	79.391	Equus_caballus
ENSBTAG00000001939	SECISBP2	95	76.688	ENSEEUG00000004400	SECISBP2	100	71.930	Erinaceus_europaeus
ENSBTAG00000001939	SECISBP2	50	55.068	ENSELUG00000014795	-	82	54.595	Esox_lucius
ENSBTAG00000001939	SECISBP2	100	75.556	ENSFCAG00000004214	SECISBP2	100	74.005	Felis_catus
ENSBTAG00000001939	SECISBP2	93	57.773	ENSFALG00000012441	SECISBP2	94	44.624	Ficedula_albicollis
ENSBTAG00000001939	SECISBP2	100	77.823	ENSFDAG00000021183	SECISBP2	96	71.379	Fukomys_damarensis
ENSBTAG00000001939	SECISBP2	58	47.951	ENSFHEG00000004095	secisbp2	66	45.421	Fundulus_heteroclitus
ENSBTAG00000001939	SECISBP2	92	57.666	ENSGALG00000010694	SECISBP2	96	42.225	Gallus_gallus
ENSBTAG00000001939	SECISBP2	58	49.053	ENSGAFG00000016947	secisbp2	60	49.053	Gambusia_affinis
ENSBTAG00000001939	SECISBP2	59	50.431	ENSGACG00000013757	secisbp2	75	50.431	Gasterosteus_aculeatus
ENSBTAG00000001939	SECISBP2	100	80.606	ENSGGOG00000000453	SECISBP2	100	77.003	Gorilla_gorilla
ENSBTAG00000001939	SECISBP2	54	53.598	ENSHBUG00000007014	secisbp2	96	53.598	Haplochromis_burtoni
ENSBTAG00000001939	SECISBP2	100	78.138	ENSHGLG00000014380	SECISBP2	96	73.171	Heterocephalus_glaber_female
ENSBTAG00000001939	SECISBP2	100	78.138	ENSHGLG00100006953	SECISBP2	96	73.055	Heterocephalus_glaber_male
ENSBTAG00000001939	SECISBP2	53	52.871	ENSHCOG00000008010	secisbp2	58	52.871	Hippocampus_comes
ENSBTAG00000001939	SECISBP2	56	53.976	ENSIPUG00000015393	secisbp2	62	49.595	Ictalurus_punctatus
ENSBTAG00000001939	SECISBP2	100	77.823	ENSSTOG00000000921	SECISBP2	100	74.562	Ictidomys_tridecemlineatus
ENSBTAG00000001939	SECISBP2	100	72.254	ENSJJAG00000020492	Secisbp2	100	67.586	Jaculus_jaculus
ENSBTAG00000001939	SECISBP2	56	54.217	ENSKMAG00000007129	secisbp2	64	51.230	Kryptolebias_marmoratus
ENSBTAG00000001939	SECISBP2	56	55.083	ENSLBEG00000026023	secisbp2	61	50.497	Labrus_bergylta
ENSBTAG00000001939	SECISBP2	57	52.371	ENSLACG00000005735	SECISBP2	87	52.766	Latimeria_chalumnae
ENSBTAG00000001939	SECISBP2	56	54.524	ENSLOCG00000011742	secisbp2	80	51.660	Lepisosteus_oculatus
ENSBTAG00000001939	SECISBP2	100	79.116	ENSLAFG00000012998	SECISBP2	100	71.940	Loxodonta_africana
ENSBTAG00000001939	SECISBP2	100	80.000	ENSMFAG00000003045	SECISBP2	100	76.423	Macaca_fascicularis
ENSBTAG00000001939	SECISBP2	100	80.000	ENSMMUG00000012532	SECISBP2	100	76.423	Macaca_mulatta
ENSBTAG00000001939	SECISBP2	100	79.798	ENSMNEG00000031737	SECISBP2	100	76.307	Macaca_nemestrina
ENSBTAG00000001939	SECISBP2	100	78.710	ENSMLEG00000028868	SECISBP2	100	76.136	Mandrillus_leucophaeus
ENSBTAG00000001939	SECISBP2	65	48.643	ENSMAMG00000006644	secisbp2	78	42.925	Mastacembelus_armatus
ENSBTAG00000001939	SECISBP2	56	53.269	ENSMZEG00005013614	secisbp2	62	49.084	Maylandia_zebra
ENSBTAG00000001939	SECISBP2	100	74.648	ENSMAUG00000008659	Secisbp2	100	66.901	Mesocricetus_auratus
ENSBTAG00000001939	SECISBP2	100	80.645	ENSMICG00000001176	SECISBP2	100	77.494	Microcebus_murinus
ENSBTAG00000001939	SECISBP2	99	75.502	ENSMOCG00000000616	Secisbp2	100	67.633	Microtus_ochrogaster
ENSBTAG00000001939	SECISBP2	53	54.663	ENSMMOG00000017977	secisbp2	89	54.663	Mola_mola
ENSBTAG00000001939	SECISBP2	93	64.151	ENSMODG00000013365	SECISBP2	100	55.134	Monodelphis_domestica
ENSBTAG00000001939	SECISBP2	76	41.667	ENSMALG00000004907	secisbp2	86	41.667	Monopterus_albus
ENSBTAG00000001939	SECISBP2	55	45.476	MGP_CAROLIEiJ_G0024231	Secisbp2l	79	47.965	Mus_caroli
ENSBTAG00000001939	SECISBP2	100	74.096	MGP_CAROLIEiJ_G0018518	Secisbp2	100	66.204	Mus_caroli
ENSBTAG00000001939	SECISBP2	100	74.749	ENSMUSG00000035139	Secisbp2	100	67.283	Mus_musculus
ENSBTAG00000001939	SECISBP2	55	45.390	ENSMUSG00000035093	Secisbp2l	79	47.278	Mus_musculus
ENSBTAG00000001939	SECISBP2	56	45.093	MGP_PahariEiJ_G0025677	Secisbp2l	79	47.674	Mus_pahari
ENSBTAG00000001939	SECISBP2	100	74.849	MGP_PahariEiJ_G0019584	Secisbp2	100	66.512	Mus_pahari
ENSBTAG00000001939	SECISBP2	100	74.008	MGP_SPRETEiJ_G0019399	Secisbp2	100	67.126	Mus_spretus
ENSBTAG00000001939	SECISBP2	55	45.476	MGP_SPRETEiJ_G0025151	Secisbp2l	79	47.965	Mus_spretus
ENSBTAG00000001939	SECISBP2	68	72.890	ENSMPUG00000008495	-	100	73.571	Mustela_putorius_furo
ENSBTAG00000001939	SECISBP2	99	76.861	ENSMLUG00000012348	SECISBP2	100	72.748	Myotis_lucifugus
ENSBTAG00000001939	SECISBP2	100	75.502	ENSNGAG00000002364	Secisbp2	100	67.981	Nannospalax_galili
ENSBTAG00000001939	SECISBP2	56	52.300	ENSNBRG00000022804	secisbp2	80	41.628	Neolamprologus_brichardi
ENSBTAG00000001939	SECISBP2	100	79.570	ENSNLEG00000008739	SECISBP2	100	76.389	Nomascus_leucogenys
ENSBTAG00000001939	SECISBP2	52	55.034	ENSMEUG00000003854	-	60	55.034	Notamacropus_eugenii
ENSBTAG00000001939	SECISBP2	95	66.242	ENSOPRG00000007588	SECISBP2	99	60.787	Ochotona_princeps
ENSBTAG00000001939	SECISBP2	99	79.192	ENSODEG00000000675	SECISBP2	100	71.196	Octodon_degus
ENSBTAG00000001939	SECISBP2	59	50.435	ENSONIG00000016931	secisbp2	99	51.908	Oreochromis_niloticus
ENSBTAG00000001939	SECISBP2	100	76.566	ENSOCUG00000012932	SECISBP2	100	73.086	Oryctolagus_cuniculus
ENSBTAG00000001939	SECISBP2	53	54.726	ENSORLG00000000343	secisbp2	69	51.198	Oryzias_latipes
ENSBTAG00000001939	SECISBP2	53	55.051	ENSORLG00020012878	secisbp2	67	51.435	Oryzias_latipes_hni
ENSBTAG00000001939	SECISBP2	53	55.443	ENSORLG00015004559	secisbp2	61	51.770	Oryzias_latipes_hsok
ENSBTAG00000001939	SECISBP2	59	51.183	ENSOMEG00000008595	secisbp2	63	51.599	Oryzias_melastigma
ENSBTAG00000001939	SECISBP2	100	80.606	ENSOGAG00000000317	SECISBP2	97	76.102	Otolemur_garnettii
ENSBTAG00000001939	SECISBP2	100	96.241	ENSOARG00000007741	SECISBP2	100	96.122	Ovis_aries
ENSBTAG00000001939	SECISBP2	100	80.808	ENSPPAG00000012385	SECISBP2	100	76.887	Pan_paniscus
ENSBTAG00000001939	SECISBP2	100	75.556	ENSPPRG00000023911	SECISBP2	100	74.005	Panthera_pardus
ENSBTAG00000001939	SECISBP2	98	67.433	ENSPTIG00000009781	SECISBP2	100	65.762	Panthera_tigris_altaica
ENSBTAG00000001939	SECISBP2	100	80.606	ENSPTRG00000021094	SECISBP2	100	77.003	Pan_troglodytes
ENSBTAG00000001939	SECISBP2	100	79.798	ENSPANG00000024873	SECISBP2	100	76.307	Papio_anubis
ENSBTAG00000001939	SECISBP2	56	54.098	ENSPKIG00000006499	SECISBP2	51	53.515	Paramormyrops_kingsleyae
ENSBTAG00000001939	SECISBP2	78	57.611	ENSPSIG00000016257	SECISBP2	97	45.466	Pelodiscus_sinensis
ENSBTAG00000001939	SECISBP2	100	74.615	ENSPEMG00000020212	Secisbp2	100	68.177	Peromyscus_maniculatus_bairdii
ENSBTAG00000001939	SECISBP2	94	64.583	ENSPCIG00000010304	SECISBP2	100	56.808	Phascolarctos_cinereus
ENSBTAG00000001939	SECISBP2	60	49.370	ENSPFOG00000008146	secisbp2	75	49.370	Poecilia_formosa
ENSBTAG00000001939	SECISBP2	57	51.852	ENSPLAG00000004505	secisbp2	95	51.852	Poecilia_latipinna
ENSBTAG00000001939	SECISBP2	57	51.147	ENSPMEG00000013702	secisbp2	63	46.943	Poecilia_mexicana
ENSBTAG00000001939	SECISBP2	55	52.758	ENSPREG00000008117	secisbp2	62	47.951	Poecilia_reticulata
ENSBTAG00000001939	SECISBP2	100	79.798	ENSPPYG00000019359	SECISBP2	100	76.423	Pongo_abelii
ENSBTAG00000001939	SECISBP2	76	71.861	ENSPCAG00000000559	-	80	67.799	Procavia_capensis
ENSBTAG00000001939	SECISBP2	100	80.847	ENSPCOG00000013354	SECISBP2	100	76.682	Propithecus_coquereli
ENSBTAG00000001939	SECISBP2	93	68.539	ENSPVAG00000011013	SECISBP2	90	68.539	Pteropus_vampyrus
ENSBTAG00000001939	SECISBP2	56	53.269	ENSPNYG00000016799	secisbp2	62	49.084	Pundamilia_nyererei
ENSBTAG00000001939	SECISBP2	58	48.454	ENSPNAG00000029922	secisbp2	78	44.198	Pygocentrus_nattereri
ENSBTAG00000001939	SECISBP2	100	76.210	ENSRNOG00000013773	Secisbp2	100	67.981	Rattus_norvegicus
ENSBTAG00000001939	SECISBP2	99	80.000	ENSRBIG00000044115	SECISBP2	100	75.782	Rhinopithecus_bieti
ENSBTAG00000001939	SECISBP2	99	80.000	ENSRROG00000030742	SECISBP2	100	75.782	Rhinopithecus_roxellana
ENSBTAG00000001939	SECISBP2	100	69.622	ENSSBOG00000015392	SECISBP2	92	79.559	Saimiri_boliviensis_boliviensis
ENSBTAG00000001939	SECISBP2	96	63.579	ENSSHAG00000005947	SECISBP2	100	58.545	Sarcophilus_harrisii
ENSBTAG00000001939	SECISBP2	54	54.478	ENSSFOG00015010409	secisbp2	57	48.479	Scleropages_formosus
ENSBTAG00000001939	SECISBP2	62	51.148	ENSSMAG00000008472	secisbp2	76	51.287	Scophthalmus_maximus
ENSBTAG00000001939	SECISBP2	67	49.395	ENSSDUG00000002089	secisbp2	62	51.059	Seriola_dumerili
ENSBTAG00000001939	SECISBP2	67	48.790	ENSSLDG00000003510	secisbp2	61	50.101	Seriola_lalandi_dorsalis
ENSBTAG00000001939	SECISBP2	75	97.260	ENSSARG00000012518	-	75	97.260	Sorex_araneus
ENSBTAG00000001939	SECISBP2	82	54.967	ENSSPUG00000009635	SECISBP2	99	41.626	Sphenodon_punctatus
ENSBTAG00000001939	SECISBP2	66	46.461	ENSSPAG00000013606	secisbp2	66	46.703	Stegastes_partitus
ENSBTAG00000001939	SECISBP2	100	87.010	ENSSSCG00000028033	SECISBP2	100	84.390	Sus_scrofa
ENSBTAG00000001939	SECISBP2	61	58.105	ENSTGUG00000000440	SECISBP2	87	58.105	Taeniopygia_guttata
ENSBTAG00000001939	SECISBP2	53	53.465	ENSTRUG00000016835	secisbp2	64	49.266	Takifugu_rubripes
ENSBTAG00000001939	SECISBP2	61	51.266	ENSTNIG00000015576	secisbp2	95	51.739	Tetraodon_nigroviridis
ENSBTAG00000001939	SECISBP2	77	75.556	ENSTBEG00000000288	SECISBP2	77	75.556	Tupaia_belangeri
ENSBTAG00000001939	SECISBP2	100	87.705	ENSTTRG00000003339	SECISBP2	98	84.634	Tursiops_truncatus
ENSBTAG00000001939	SECISBP2	100	80.242	ENSUAMG00000016243	SECISBP2	100	75.000	Ursus_americanus
ENSBTAG00000001939	SECISBP2	99	79.435	ENSUMAG00000016261	SECISBP2	99	73.728	Ursus_maritimus
ENSBTAG00000001939	SECISBP2	94	82.114	ENSVVUG00000022278	SECISBP2	99	74.969	Vulpes_vulpes
ENSBTAG00000001939	SECISBP2	61	53.484	ENSXETG00000029955	SECISBP2	86	54.149	Xenopus_tropicalis
ENSBTAG00000001939	SECISBP2	54	51.750	ENSXCOG00000009547	secisbp2	74	51.750	Xiphophorus_couchianus
ENSBTAG00000001939	SECISBP2	57	51.963	ENSXMAG00000003090	secisbp2	62	47.619	Xiphophorus_maculatus