EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000002223 (Gene tree)
Gene ID: 614870
Gene Symbol: POP4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 10036 bases
Position: chr18:40232966-40243001
Accession: 33164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000002876	UPF0086	PF01868.16	6.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000002876	-	1840	-	ENSBTAP00000002876	220 (aa)	-	Q2KIB9

Gene Model

Click here to download ENSBTAG00000002223's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000002223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000002223	POP4	100	90.000	ENSG00000105171	POP4	100	95.833	Homo_sapiens
ENSBTAG00000002223	POP4	99	90.367	ENSAMEG00000018329	-	99	90.367	Ailuropoda_melanoleuca
ENSBTAG00000002223	POP4	97	78.605	ENSAMEG00000003172	-	97	78.605	Ailuropoda_melanoleuca
ENSBTAG00000002223	POP4	93	62.745	ENSACIG00000008358	pop4	93	64.615	Amphilophus_citrinellus
ENSBTAG00000002223	POP4	89	64.467	ENSAOCG00000010116	pop4	96	63.452	Amphiprion_ocellaris
ENSBTAG00000002223	POP4	94	62.019	ENSAPEG00000002829	pop4	87	61.058	Amphiprion_percula
ENSBTAG00000002223	POP4	94	62.500	ENSATEG00000013028	pop4	94	61.538	Anabas_testudineus
ENSBTAG00000002223	POP4	92	74.752	ENSAPLG00000014051	POP4	98	74.752	Anas_platyrhynchos
ENSBTAG00000002223	POP4	100	87.727	ENSANAG00000020295	POP4	100	87.727	Aotus_nancymaae
ENSBTAG00000002223	POP4	93	61.275	ENSACLG00000000526	pop4	92	61.275	Astatotilapia_calliptera
ENSBTAG00000002223	POP4	100	60.455	ENSAMXG00000002899	pop4	100	60.455	Astyanax_mexicanus
ENSBTAG00000002223	POP4	100	85.973	ENSCJAG00000046750	POP4	100	88.333	Callithrix_jacchus
ENSBTAG00000002223	POP4	83	92.308	ENSCAFG00000007630	POP4	100	92.308	Canis_familiaris
ENSBTAG00000002223	POP4	100	97.273	ENSCHIG00000016743	POP4	100	97.273	Capra_hircus
ENSBTAG00000002223	POP4	100	90.909	ENSTSYG00000003488	POP4	100	90.909	Carlito_syrichta
ENSBTAG00000002223	POP4	99	67.742	ENSCAPG00000011105	POP4	100	67.742	Cavia_aperea
ENSBTAG00000002223	POP4	100	88.636	ENSCPOG00000002992	POP4	100	88.636	Cavia_porcellus
ENSBTAG00000002223	POP4	100	89.091	ENSCCAG00000020285	-	100	89.091	Cebus_capucinus
ENSBTAG00000002223	POP4	100	75.909	ENSCCAG00000034244	-	100	75.909	Cebus_capucinus
ENSBTAG00000002223	POP4	100	90.455	ENSCATG00000036022	POP4	100	97.917	Cercocebus_atys
ENSBTAG00000002223	POP4	100	89.545	ENSCLAG00000013162	POP4	100	89.545	Chinchilla_lanigera
ENSBTAG00000002223	POP4	99	89.908	ENSCSAG00000004868	POP4	100	89.908	Chlorocebus_sabaeus
ENSBTAG00000002223	POP4	98	69.907	ENSCHOG00000002071	POP4	100	69.585	Choloepus_hoffmanni
ENSBTAG00000002223	POP4	100	75.455	ENSCPBG00000016132	POP4	100	75.455	Chrysemys_picta_bellii
ENSBTAG00000002223	POP4	84	32.984	ENSCING00000023871	-	94	32.461	Ciona_intestinalis
ENSBTAG00000002223	POP4	90	92.424	ENSCANG00000005924	POP4	98	92.424	Colobus_angolensis_palliatus
ENSBTAG00000002223	POP4	100	85.000	ENSCGRG00001017185	Pop4	100	85.000	Cricetulus_griseus_chok1gshd
ENSBTAG00000002223	POP4	100	85.000	ENSCGRG00000008155	Pop4	100	85.000	Cricetulus_griseus_crigri
ENSBTAG00000002223	POP4	94	53.846	ENSCSEG00000002946	pop4	94	53.846	Cynoglossus_semilaevis
ENSBTAG00000002223	POP4	98	44.037	ENSCVAG00000018602	POP4	94	43.578	Cyprinodon_variegatus
ENSBTAG00000002223	POP4	100	62.727	ENSDARG00000101472	pop4	100	62.727	Danio_rerio
ENSBTAG00000002223	POP4	100	89.091	ENSDNOG00000047663	POP4	88	89.091	Dasypus_novemcinctus
ENSBTAG00000002223	POP4	78	83.140	ENSDORG00000008577	Pop4	100	83.140	Dipodomys_ordii
ENSBTAG00000002223	POP4	75	36.000	FBgn0035831	CG8038	70	37.931	Drosophila_melanogaster
ENSBTAG00000002223	POP4	99	73.733	ENSETEG00000003607	POP4	100	73.733	Echinops_telfairi
ENSBTAG00000002223	POP4	100	42.534	ENSEBUG00000008575	pop4	100	42.534	Eptatretus_burgeri
ENSBTAG00000002223	POP4	100	39.914	ENSEBUG00000004305	pop4	100	40.343	Eptatretus_burgeri
ENSBTAG00000002223	POP4	90	47.619	ENSEBUG00000010447	pop4	82	48.095	Eptatretus_burgeri
ENSBTAG00000002223	POP4	100	90.385	ENSECAG00000020206	POP4	82	90.385	Equus_caballus
ENSBTAG00000002223	POP4	91	68.500	ENSEEUG00000013109	POP4	100	68.500	Erinaceus_europaeus
ENSBTAG00000002223	POP4	93	63.725	ENSELUG00000019812	pop4	93	63.725	Esox_lucius
ENSBTAG00000002223	POP4	100	90.909	ENSFCAG00000001619	POP4	100	90.909	Felis_catus
ENSBTAG00000002223	POP4	98	71.759	ENSFALG00000000206	POP4	96	71.759	Ficedula_albicollis
ENSBTAG00000002223	POP4	100	90.000	ENSFDAG00000017859	POP4	100	90.000	Fukomys_damarensis
ENSBTAG00000002223	POP4	90	58.500	ENSFHEG00000012745	pop4	90	57.500	Fundulus_heteroclitus
ENSBTAG00000002223	POP4	90	62.189	ENSGMOG00000000335	pop4	99	62.189	Gadus_morhua
ENSBTAG00000002223	POP4	100	70.909	ENSGALG00000041972	POP4	92	70.909	Gallus_gallus
ENSBTAG00000002223	POP4	78	50.000	ENSGAFG00000003571	pop4	96	50.000	Gambusia_affinis
ENSBTAG00000002223	POP4	94	61.244	ENSGACG00000014510	pop4	93	66.860	Gasterosteus_aculeatus
ENSBTAG00000002223	POP4	100	75.909	ENSGAGG00000024544	POP4	79	75.909	Gopherus_agassizii
ENSBTAG00000002223	POP4	99	90.367	ENSGGOG00000038346	POP4	99	90.367	Gorilla_gorilla
ENSBTAG00000002223	POP4	93	61.275	ENSHBUG00000021821	pop4	92	61.275	Haplochromis_burtoni
ENSBTAG00000002223	POP4	99	88.532	ENSHGLG00000015798	POP4	99	88.532	Heterocephalus_glaber_female
ENSBTAG00000002223	POP4	100	88.182	ENSHGLG00100009737	POP4	100	88.182	Heterocephalus_glaber_male
ENSBTAG00000002223	POP4	94	60.952	ENSHCOG00000020937	pop4	94	60.952	Hippocampus_comes
ENSBTAG00000002223	POP4	100	61.364	ENSIPUG00000013652	pop4	100	61.364	Ictalurus_punctatus
ENSBTAG00000002223	POP4	100	90.455	ENSSTOG00000011016	POP4	100	90.455	Ictidomys_tridecemlineatus
ENSBTAG00000002223	POP4	100	90.455	ENSJJAG00000013376	Pop4	100	90.455	Jaculus_jaculus
ENSBTAG00000002223	POP4	98	61.009	ENSKMAG00000012250	pop4	98	60.092	Kryptolebias_marmoratus
ENSBTAG00000002223	POP4	99	55.455	ENSLBEG00000014139	pop4	99	56.364	Labrus_bergylta
ENSBTAG00000002223	POP4	99	55.455	ENSLBEG00000018846	-	99	56.364	Labrus_bergylta
ENSBTAG00000002223	POP4	100	65.909	ENSLACG00000008581	POP4	99	65.909	Latimeria_chalumnae
ENSBTAG00000002223	POP4	100	71.818	ENSLOCG00000005597	pop4	100	71.818	Lepisosteus_oculatus
ENSBTAG00000002223	POP4	99	89.401	ENSLAFG00000000084	POP4	100	88.182	Loxodonta_africana
ENSBTAG00000002223	POP4	100	90.000	ENSMFAG00000029606	POP4	100	90.000	Macaca_fascicularis
ENSBTAG00000002223	POP4	100	88.235	ENSMMUG00000017424	POP4	100	88.235	Macaca_mulatta
ENSBTAG00000002223	POP4	100	88.235	ENSMNEG00000031374	POP4	100	88.235	Macaca_nemestrina
ENSBTAG00000002223	POP4	100	90.455	ENSMLEG00000043454	POP4	100	90.455	Mandrillus_leucophaeus
ENSBTAG00000002223	POP4	85	66.489	ENSMAMG00000011716	pop4	93	62.500	Mastacembelus_armatus
ENSBTAG00000002223	POP4	93	61.275	ENSMZEG00005002360	pop4	92	61.275	Maylandia_zebra
ENSBTAG00000002223	POP4	99	71.233	ENSMGAG00000005337	POP4	98	71.233	Meleagris_gallopavo
ENSBTAG00000002223	POP4	100	86.818	ENSMAUG00000020110	Pop4	100	86.818	Mesocricetus_auratus
ENSBTAG00000002223	POP4	99	88.073	ENSMICG00000035730	POP4	98	88.073	Microcebus_murinus
ENSBTAG00000002223	POP4	94	61.836	ENSMMOG00000015321	pop4	93	62.621	Mola_mola
ENSBTAG00000002223	POP4	98	81.481	ENSMODG00000029406	POP4	94	81.481	Monodelphis_domestica
ENSBTAG00000002223	POP4	95	63.810	ENSMALG00000012571	pop4	95	63.810	Monopterus_albus
ENSBTAG00000002223	POP4	100	84.163	MGP_CAROLIEiJ_G0029600	Pop4	100	84.163	Mus_caroli
ENSBTAG00000002223	POP4	100	84.163	ENSMUSG00000030423	Pop4	100	83.710	Mus_musculus
ENSBTAG00000002223	POP4	100	84.545	MGP_SPRETEiJ_G0030699	Pop4	100	84.545	Mus_spretus
ENSBTAG00000002223	POP4	100	77.828	ENSMPUG00000008063	-	100	77.828	Mustela_putorius_furo
ENSBTAG00000002223	POP4	100	90.455	ENSMPUG00000008041	-	100	90.455	Mustela_putorius_furo
ENSBTAG00000002223	POP4	99	70.320	ENSMLUG00000010774	POP4	99	70.320	Myotis_lucifugus
ENSBTAG00000002223	POP4	57	84.000	ENSMEUG00000003636	-	100	84.000	Notamacropus_eugenii
ENSBTAG00000002223	POP4	91	91.500	ENSOPRG00000004736	POP4	100	91.500	Ochotona_princeps
ENSBTAG00000002223	POP4	99	88.479	ENSODEG00000013025	POP4	100	89.151	Octodon_degus
ENSBTAG00000002223	POP4	93	60.784	ENSONIG00000003458	pop4	91	60.784	Oreochromis_niloticus
ENSBTAG00000002223	POP4	100	89.545	ENSOCUG00000015974	POP4	100	89.545	Oryctolagus_cuniculus
ENSBTAG00000002223	POP4	90	61.809	ENSORLG00000020317	pop4	90	61.307	Oryzias_latipes
ENSBTAG00000002223	POP4	94	60.577	ENSORLG00015011624	pop4	93	60.096	Oryzias_latipes_hsok
ENSBTAG00000002223	POP4	94	62.019	ENSOMEG00000002538	pop4	93	61.058	Oryzias_melastigma
ENSBTAG00000002223	POP4	99	87.671	ENSOGAG00000011168	POP4	99	87.671	Otolemur_garnettii
ENSBTAG00000002223	POP4	100	96.833	ENSOARG00000004041	POP4	100	96.833	Ovis_aries
ENSBTAG00000002223	POP4	100	90.455	ENSPPAG00000040372	POP4	100	90.455	Pan_paniscus
ENSBTAG00000002223	POP4	100	90.909	ENSPPRG00000010502	POP4	100	90.909	Panthera_pardus
ENSBTAG00000002223	POP4	100	90.909	ENSPTIG00000016598	POP4	100	90.909	Panthera_tigris_altaica
ENSBTAG00000002223	POP4	100	90.455	ENSPTRG00000010779	POP4	100	90.455	Pan_troglodytes
ENSBTAG00000002223	POP4	100	90.000	ENSPANG00000008546	POP4	100	90.000	Papio_anubis
ENSBTAG00000002223	POP4	89	70.352	ENSPKIG00000004468	pop4	87	70.202	Paramormyrops_kingsleyae
ENSBTAG00000002223	POP4	100	75.909	ENSPSIG00000015690	POP4	100	79.208	Pelodiscus_sinensis
ENSBTAG00000002223	POP4	90	58.621	ENSPMGG00000008608	pop4	97	58.128	Periophthalmus_magnuspinnatus
ENSBTAG00000002223	POP4	100	85.455	ENSPEMG00000014034	-	96	85.455	Peromyscus_maniculatus_bairdii
ENSBTAG00000002223	POP4	99	72.477	ENSPEMG00000019982	-	100	72.477	Peromyscus_maniculatus_bairdii
ENSBTAG00000002223	POP4	83	56.061	ENSPMAG00000006265	pop4	100	56.061	Petromyzon_marinus
ENSBTAG00000002223	POP4	100	81.364	ENSPCIG00000024738	POP4	95	81.364	Phascolarctos_cinereus
ENSBTAG00000002223	POP4	98	56.682	ENSPFOG00000000925	pop4	98	56.682	Poecilia_formosa
ENSBTAG00000002223	POP4	98	56.682	ENSPLAG00000003161	pop4	98	56.682	Poecilia_latipinna
ENSBTAG00000002223	POP4	98	56.682	ENSPMEG00000002475	pop4	98	56.682	Poecilia_mexicana
ENSBTAG00000002223	POP4	92	58.621	ENSPREG00000022403	pop4	88	58.621	Poecilia_reticulata
ENSBTAG00000002223	POP4	100	90.909	ENSPPYG00000009805	POP4	100	90.909	Pongo_abelii
ENSBTAG00000002223	POP4	99	79.817	ENSPCAG00000007737	POP4	99	79.817	Procavia_capensis
ENSBTAG00000002223	POP4	100	90.909	ENSPCOG00000018055	POP4	100	90.909	Propithecus_coquereli
ENSBTAG00000002223	POP4	100	87.273	ENSPVAG00000006069	POP4	100	87.273	Pteropus_vampyrus
ENSBTAG00000002223	POP4	93	61.765	ENSPNYG00000020038	pop4	92	61.765	Pundamilia_nyererei
ENSBTAG00000002223	POP4	100	63.182	ENSPNAG00000005591	pop4	100	63.182	Pygocentrus_nattereri
ENSBTAG00000002223	POP4	100	85.520	ENSRNOG00000027646	Pop4	100	85.520	Rattus_norvegicus
ENSBTAG00000002223	POP4	80	85.143	ENSRBIG00000044769	POP4	89	88.406	Rhinopithecus_bieti
ENSBTAG00000002223	POP4	100	89.545	ENSRROG00000028903	POP4	100	89.545	Rhinopithecus_roxellana
ENSBTAG00000002223	POP4	57	35.252	YBR257W	-	50	35.252	Saccharomyces_cerevisiae
ENSBTAG00000002223	POP4	100	88.636	ENSSBOG00000032445	POP4	100	88.636	Saimiri_boliviensis_boliviensis
ENSBTAG00000002223	POP4	99	82.110	ENSSHAG00000016888	POP4	99	82.110	Sarcophilus_harrisii
ENSBTAG00000002223	POP4	99	65.138	ENSSFOG00015014556	pop4	97	64.516	Scleropages_formosus
ENSBTAG00000002223	POP4	94	63.462	ENSSMAG00000016611	pop4	99	62.559	Scophthalmus_maximus
ENSBTAG00000002223	POP4	94	62.679	ENSSDUG00000019865	pop4	84	62.019	Seriola_dumerili
ENSBTAG00000002223	POP4	94	62.981	ENSSLDG00000001763	pop4	93	62.019	Seriola_lalandi_dorsalis
ENSBTAG00000002223	POP4	99	91.244	ENSSARG00000004748	POP4	100	91.244	Sorex_araneus
ENSBTAG00000002223	POP4	94	64.423	ENSSPAG00000014364	pop4	93	63.462	Stegastes_partitus
ENSBTAG00000002223	POP4	100	95.000	ENSSSCG00000002854	POP4	100	95.000	Sus_scrofa
ENSBTAG00000002223	POP4	90	76.263	ENSTGUG00000008953	POP4	99	76.263	Taeniopygia_guttata
ENSBTAG00000002223	POP4	92	61.951	ENSTNIG00000006401	pop4	100	61.951	Tetraodon_nigroviridis
ENSBTAG00000002223	POP4	100	89.140	ENSTBEG00000002194	POP4	100	91.403	Tupaia_belangeri
ENSBTAG00000002223	POP4	100	93.182	ENSTTRG00000005882	POP4	100	93.182	Tursiops_truncatus
ENSBTAG00000002223	POP4	100	90.000	ENSUAMG00000003049	-	100	90.000	Ursus_americanus
ENSBTAG00000002223	POP4	100	90.000	ENSUMAG00000007522	-	100	90.000	Ursus_maritimus
ENSBTAG00000002223	POP4	93	90.196	ENSVVUG00000016876	-	71	90.196	Vulpes_vulpes
ENSBTAG00000002223	POP4	98	68.056	ENSXETG00000017598	pop4	98	66.667	Xenopus_tropicalis
ENSBTAG00000002223	POP4	92	58.537	ENSXCOG00000017695	pop4	88	58.049	Xiphophorus_couchianus
ENSBTAG00000002223	POP4	92	58.537	ENSXMAG00000013862	pop4	88	58.049	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001682	tRNA 5'-leader removal	-	IEA	Process
GO:0005730	nucleolus	-	IEA	Component
GO:0030681	multimeric ribonuclease P complex	-	IEA	Component
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process