EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000002287 (Gene tree)
Gene ID: 539275
Gene Symbol: CHD9
Alias: -
Full Name: Bos taurus chromodomain helicase DNA binding protein 9 (CHD9)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 226602 bases
Position: chr18:21555470-21782071
Accession: NM_001205650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000068204	ResIII	PF04851.15	7e-06	1	1
ENSBTAP00000002955	ResIII	PF04851.15	7e-06	1	1
ENSBTAP00000068204	BRK	PF07533.16	4.2e-31	1	2
ENSBTAP00000068204	BRK	PF07533.16	4.2e-31	2	2
ENSBTAP00000002955	BRK	PF07533.16	4.3e-31	1	2
ENSBTAP00000002955	BRK	PF07533.16	4.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000002955	-	9246	-	ENSBTAP00000002955	2900 (aa)	XP_005218746	E1BDZ3
ENSBTAT00000066388	-	11529	XM_024978433	ENSBTAP00000068204	2883 (aa)	XP_024834201	UPI00017C391D

Gene Model

Click here to download ENSBTAG00000002287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000002287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000002287	CHD9	74	56.488	ENSBTAG00000020422	CHD8	70	67.079
ENSBTAG00000002287	CHD9	68	65.965	ENSBTAG00000005733	CHD6	76	64.005
ENSBTAG00000002287	CHD9	69	71.097	ENSBTAG00000021841	CHD7	93	57.499

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000002287	CHD9	100	95.633	ENSG00000177200	CHD9	99	100.000	Homo_sapiens
ENSBTAG00000002287	CHD9	85	70.280	ENSAPOG00000023034	chd9	99	60.137	Acanthochromis_polyacanthus
ENSBTAG00000002287	CHD9	100	97.106	ENSAMEG00000016232	CHD9	100	97.106	Ailuropoda_melanoleuca
ENSBTAG00000002287	CHD9	56	73.467	ENSACIG00000004097	chd9	73	61.455	Amphilophus_citrinellus
ENSBTAG00000002287	CHD9	79	71.129	ENSAOCG00000005487	chd9	67	74.970	Amphiprion_ocellaris
ENSBTAG00000002287	CHD9	79	70.598	ENSAPEG00000009859	chd9	67	74.985	Amphiprion_percula
ENSBTAG00000002287	CHD9	84	71.030	ENSATEG00000002748	chd9	73	63.806	Anabas_testudineus
ENSBTAG00000002287	CHD9	99	83.964	ENSAPLG00000002826	CHD9	74	86.157	Anas_platyrhynchos
ENSBTAG00000002287	CHD9	99	80.808	ENSACAG00000016150	CHD9	98	81.156	Anolis_carolinensis
ENSBTAG00000002287	CHD9	100	95.143	ENSANAG00000015630	CHD9	100	98.168	Aotus_nancymaae
ENSBTAG00000002287	CHD9	79	70.178	ENSACLG00000016899	chd9	73	62.892	Astatotilapia_calliptera
ENSBTAG00000002287	CHD9	95	63.137	ENSAMXG00000005652	chd9	68	75.045	Astyanax_mexicanus
ENSBTAG00000002287	CHD9	100	95.149	ENSCJAG00000001573	CHD9	100	98.535	Callithrix_jacchus
ENSBTAG00000002287	CHD9	100	96.796	ENSCAFG00000009699	CHD9	100	96.796	Canis_familiaris
ENSBTAG00000002287	CHD9	100	96.796	ENSCAFG00020002879	CHD9	100	99.267	Canis_lupus_dingo
ENSBTAG00000002287	CHD9	100	96.690	ENSCHIG00000021000	CHD9	100	96.862	Capra_hircus
ENSBTAG00000002287	CHD9	100	95.762	ENSTSYG00000007693	CHD9	100	98.168	Carlito_syrichta
ENSBTAG00000002287	CHD9	81	79.513	ENSCAPG00000011604	CHD9	82	79.597	Cavia_aperea
ENSBTAG00000002287	CHD9	100	90.837	ENSCPOG00000036544	CHD9	100	90.527	Cavia_porcellus
ENSBTAG00000002287	CHD9	100	95.773	ENSCCAG00000036178	CHD9	100	97.802	Cebus_capucinus
ENSBTAG00000002287	CHD9	100	95.289	ENSCATG00000036753	CHD9	100	98.168	Cercocebus_atys
ENSBTAG00000002287	CHD9	99	94.624	ENSCLAG00000007137	CHD9	99	97.110	Chinchilla_lanigera
ENSBTAG00000002287	CHD9	100	95.007	ENSCSAG00000005311	CHD9	100	95.145	Chlorocebus_sabaeus
ENSBTAG00000002287	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSBTAG00000002287	CHD9	99	85.109	ENSCPBG00000012459	CHD9	99	90.000	Chrysemys_picta_bellii
ENSBTAG00000002287	CHD9	100	95.351	ENSCANG00000030349	CHD9	100	98.168	Colobus_angolensis_palliatus
ENSBTAG00000002287	CHD9	99	91.528	ENSCGRG00001016150	Chd9	99	91.007	Cricetulus_griseus_chok1gshd
ENSBTAG00000002287	CHD9	99	91.528	ENSCGRG00000012850	Chd9	99	95.838	Cricetulus_griseus_crigri
ENSBTAG00000002287	CHD9	79	68.176	ENSCSEG00000009209	chd9	67	72.245	Cynoglossus_semilaevis
ENSBTAG00000002287	CHD9	85	70.901	ENSCVAG00000016195	chd9	99	61.083	Cyprinodon_variegatus
ENSBTAG00000002287	CHD9	81	68.251	ENSDARG00000074498	chd9	68	74.043	Danio_rerio
ENSBTAG00000002287	CHD9	81	94.558	ENSDNOG00000006045	CHD9	100	94.643	Dasypus_novemcinctus
ENSBTAG00000002287	CHD9	69	93.503	ENSDORG00000008523	-	100	92.754	Dipodomys_ordii
ENSBTAG00000002287	CHD9	94	97.895	ENSETEG00000009565	CHD9	94	97.895	Echinops_telfairi
ENSBTAG00000002287	CHD9	100	96.486	ENSEASG00005014832	CHD9	100	96.486	Equus_asinus_asinus
ENSBTAG00000002287	CHD9	100	96.486	ENSECAG00000011505	CHD9	100	96.486	Equus_caballus
ENSBTAG00000002287	CHD9	81	98.343	ENSEEUG00000014515	CHD9	86	98.343	Erinaceus_europaeus
ENSBTAG00000002287	CHD9	79	73.017	ENSELUG00000006031	chd9	97	67.590	Esox_lucius
ENSBTAG00000002287	CHD9	100	96.451	ENSFCAG00000022534	CHD9	100	98.901	Felis_catus
ENSBTAG00000002287	CHD9	83	87.620	ENSFALG00000013276	CHD9	99	88.287	Ficedula_albicollis
ENSBTAG00000002287	CHD9	100	94.006	ENSFDAG00000021037	CHD9	100	93.662	Fukomys_damarensis
ENSBTAG00000002287	CHD9	84	70.538	ENSFHEG00000006068	chd9	95	69.288	Fundulus_heteroclitus
ENSBTAG00000002287	CHD9	67	76.934	ENSGMOG00000006040	chd9	83	77.001	Gadus_morhua
ENSBTAG00000002287	CHD9	96	85.622	ENSGALG00000039178	CHD9	99	85.623	Gallus_gallus
ENSBTAG00000002287	CHD9	84	70.474	ENSGAFG00000010014	chd9	98	68.039	Gambusia_affinis
ENSBTAG00000002287	CHD9	79	68.340	ENSGACG00000016694	chd9	96	75.214	Gasterosteus_aculeatus
ENSBTAG00000002287	CHD9	100	95.384	ENSGGOG00000014816	CHD9	100	98.535	Gorilla_gorilla
ENSBTAG00000002287	CHD9	79	70.725	ENSHBUG00000023322	chd9	96	69.930	Haplochromis_burtoni
ENSBTAG00000002287	CHD9	100	94.178	ENSHGLG00000014938	CHD9	99	97.572	Heterocephalus_glaber_female
ENSBTAG00000002287	CHD9	89	66.186	ENSHCOG00000000937	chd9	69	73.302	Hippocampus_comes
ENSBTAG00000002287	CHD9	82	69.081	ENSIPUG00000016448	chd9	97	73.358	Ictalurus_punctatus
ENSBTAG00000002287	CHD9	100	94.627	ENSSTOG00000022273	CHD9	99	97.572	Ictidomys_tridecemlineatus
ENSBTAG00000002287	CHD9	69	93.991	ENSJJAG00000015741	-	100	94.091	Jaculus_jaculus
ENSBTAG00000002287	CHD9	84	69.987	ENSKMAG00000016784	chd9	96	60.828	Kryptolebias_marmoratus
ENSBTAG00000002287	CHD9	92	62.791	ENSLBEG00000012077	chd9	99	61.916	Labrus_bergylta
ENSBTAG00000002287	CHD9	99	71.639	ENSLACG00000005557	CHD9	99	71.826	Latimeria_chalumnae
ENSBTAG00000002287	CHD9	87	72.775	ENSLOCG00000007225	chd9	99	73.529	Lepisosteus_oculatus
ENSBTAG00000002287	CHD9	100	94.387	ENSLAFG00000015374	CHD9	100	94.490	Loxodonta_africana
ENSBTAG00000002287	CHD9	100	95.317	ENSMFAG00000041354	CHD9	100	98.168	Macaca_fascicularis
ENSBTAG00000002287	CHD9	100	95.351	ENSMMUG00000016310	CHD9	100	98.168	Macaca_mulatta
ENSBTAG00000002287	CHD9	100	95.351	ENSMNEG00000031494	CHD9	100	95.908	Macaca_nemestrina
ENSBTAG00000002287	CHD9	100	95.351	ENSMLEG00000043219	CHD9	100	98.168	Mandrillus_leucophaeus
ENSBTAG00000002287	CHD9	79	69.712	ENSMAMG00000003909	chd9	97	61.466	Mastacembelus_armatus
ENSBTAG00000002287	CHD9	84	70.610	ENSMZEG00005006581	chd9	99	61.011	Maylandia_zebra
ENSBTAG00000002287	CHD9	95	79.704	ENSMGAG00000004642	CHD9	72	81.300	Meleagris_gallopavo
ENSBTAG00000002287	CHD9	100	96.534	ENSMICG00000016679	CHD9	100	97.436	Microcebus_murinus
ENSBTAG00000002287	CHD9	73	80.573	ENSMODG00000013142	-	99	92.671	Monodelphis_domestica
ENSBTAG00000002287	CHD9	79	69.962	ENSMALG00000013306	chd9	73	62.198	Monopterus_albus
ENSBTAG00000002287	CHD9	99	89.906	MGP_CAROLIEiJ_G0031364	Chd9	99	89.872	Mus_caroli
ENSBTAG00000002287	CHD9	99	89.656	ENSMUSG00000056608	Chd9	99	95.260	Mus_musculus
ENSBTAG00000002287	CHD9	99	88.602	MGP_PahariEiJ_G0022964	Chd9	99	88.567	Mus_pahari
ENSBTAG00000002287	CHD9	99	89.795	MGP_SPRETEiJ_G0032483	Chd9	99	89.656	Mus_spretus
ENSBTAG00000002287	CHD9	100	96.725	ENSMPUG00000003285	CHD9	100	96.725	Mustela_putorius_furo
ENSBTAG00000002287	CHD9	100	94.418	ENSMLUG00000004456	CHD9	100	94.142	Myotis_lucifugus
ENSBTAG00000002287	CHD9	84	70.682	ENSNBRG00000009423	chd9	67	75.283	Neolamprologus_brichardi
ENSBTAG00000002287	CHD9	90	96.054	ENSNLEG00000001026	CHD9	100	96.054	Nomascus_leucogenys
ENSBTAG00000002287	CHD9	76	96.732	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSBTAG00000002287	CHD9	83	100.000	ENSOPRG00000011168	CHD9	85	97.143	Ochotona_princeps
ENSBTAG00000002287	CHD9	99	93.791	ENSODEG00000004466	CHD9	99	93.687	Octodon_degus
ENSBTAG00000002287	CHD9	79	71.453	ENSONIG00000002816	chd9	96	62.790	Oreochromis_niloticus
ENSBTAG00000002287	CHD9	100	86.545	ENSOANG00000013401	CHD9	100	86.717	Ornithorhynchus_anatinus
ENSBTAG00000002287	CHD9	83	96.319	ENSOCUG00000001016	CHD9	99	96.319	Oryctolagus_cuniculus
ENSBTAG00000002287	CHD9	84	70.042	ENSORLG00000013810	chd9	67	74.567	Oryzias_latipes
ENSBTAG00000002287	CHD9	84	70.155	ENSORLG00015019126	chd9	81	62.301	Oryzias_latipes_hsok
ENSBTAG00000002287	CHD9	100	94.490	ENSOGAG00000002110	CHD9	100	94.353	Otolemur_garnettii
ENSBTAG00000002287	CHD9	100	99.483	ENSOARG00000017664	CHD9	100	99.483	Ovis_aries
ENSBTAG00000002287	CHD9	83	95.064	ENSPPAG00000039388	-	100	95.189	Pan_paniscus
ENSBTAG00000002287	CHD9	100	96.210	ENSPPRG00000004801	CHD9	100	98.535	Panthera_pardus
ENSBTAG00000002287	CHD9	100	95.245	ENSPTIG00000021854	CHD9	100	95.348	Panthera_tigris_altaica
ENSBTAG00000002287	CHD9	100	95.762	ENSPTRG00000008113	CHD9	100	98.535	Pan_troglodytes
ENSBTAG00000002287	CHD9	100	95.317	ENSPANG00000019307	CHD9	100	98.168	Papio_anubis
ENSBTAG00000002287	CHD9	97	63.050	ENSPKIG00000021876	chd9	68	77.001	Paramormyrops_kingsleyae
ENSBTAG00000002287	CHD9	98	58.982	ENSPKIG00000025401	-	71	62.724	Paramormyrops_kingsleyae
ENSBTAG00000002287	CHD9	64	85.081	ENSPSIG00000008099	CHD9	99	85.081	Pelodiscus_sinensis
ENSBTAG00000002287	CHD9	59	58.059	ENSPMAG00000006035	-	72	67.820	Petromyzon_marinus
ENSBTAG00000002287	CHD9	89	87.587	ENSPCIG00000017215	CHD9	97	90.489	Phascolarctos_cinereus
ENSBTAG00000002287	CHD9	84	70.474	ENSPFOG00000015839	chd9	89	66.242	Poecilia_formosa
ENSBTAG00000002287	CHD9	84	70.558	ENSPLAG00000011118	chd9	98	68.347	Poecilia_latipinna
ENSBTAG00000002287	CHD9	84	70.478	ENSPMEG00000015106	chd9	89	66.096	Poecilia_mexicana
ENSBTAG00000002287	CHD9	84	71.313	ENSPREG00000006473	chd9	98	68.191	Poecilia_reticulata
ENSBTAG00000002287	CHD9	100	95.624	ENSPPYG00000007348	CHD9	100	95.693	Pongo_abelii
ENSBTAG00000002287	CHD9	78	96.140	ENSPCAG00000007564	CHD9	86	96.140	Procavia_capensis
ENSBTAG00000002287	CHD9	100	94.831	ENSPCOG00000028433	CHD9	100	98.535	Propithecus_coquereli
ENSBTAG00000002287	CHD9	97	93.276	ENSPVAG00000015617	CHD9	98	93.509	Pteropus_vampyrus
ENSBTAG00000002287	CHD9	84	70.736	ENSPNYG00000010947	chd9	66	75.342	Pundamilia_nyererei
ENSBTAG00000002287	CHD9	90	66.938	ENSPNAG00000024141	chd9	68	75.404	Pygocentrus_nattereri
ENSBTAG00000002287	CHD9	90	87.118	ENSRNOG00000049302	Chd9	100	89.968	Rattus_norvegicus
ENSBTAG00000002287	CHD9	83	95.823	ENSRBIG00000035553	CHD9	100	98.168	Rhinopithecus_bieti
ENSBTAG00000002287	CHD9	82	95.908	ENSRROG00000033278	CHD9	100	98.168	Rhinopithecus_roxellana
ENSBTAG00000002287	CHD9	100	94.936	ENSSBOG00000030240	CHD9	100	97.802	Saimiri_boliviensis_boliviensis
ENSBTAG00000002287	CHD9	99	87.812	ENSSHAG00000002719	CHD9	100	87.552	Sarcophilus_harrisii
ENSBTAG00000002287	CHD9	97	63.198	ENSSFOG00015020209	chd9	99	70.418	Scleropages_formosus
ENSBTAG00000002287	CHD9	86	66.862	ENSSFOG00015001327	chd9	67	75.605	Scleropages_formosus
ENSBTAG00000002287	CHD9	85	67.940	ENSSMAG00000008953	chd9	99	62.325	Scophthalmus_maximus
ENSBTAG00000002287	CHD9	84	70.553	ENSSDUG00000006139	chd9	95	69.842	Seriola_dumerili
ENSBTAG00000002287	CHD9	84	70.578	ENSSLDG00000017818	chd9	95	69.813	Seriola_lalandi_dorsalis
ENSBTAG00000002287	CHD9	97	93.663	ENSSARG00000010632	CHD9	97	93.818	Sorex_araneus
ENSBTAG00000002287	CHD9	84	69.987	ENSSPAG00000021649	chd9	67	74.450	Stegastes_partitus
ENSBTAG00000002287	CHD9	100	95.050	ENSSSCG00000033591	CHD9	100	95.222	Sus_scrofa
ENSBTAG00000002287	CHD9	90	85.736	ENSTGUG00000007476	CHD9	100	85.966	Taeniopygia_guttata
ENSBTAG00000002287	CHD9	57	81.951	ENSTNIG00000003825	chd9	86	81.951	Tetraodon_nigroviridis
ENSBTAG00000002287	CHD9	66	95.946	ENSTBEG00000016052	-	81	95.946	Tupaia_belangeri
ENSBTAG00000002287	CHD9	90	97.050	ENSTTRG00000012674	CHD9	90	97.050	Tursiops_truncatus
ENSBTAG00000002287	CHD9	64	95.840	ENSUAMG00000022706	CHD9	100	99.267	Ursus_americanus
ENSBTAG00000002287	CHD9	90	94.693	ENSUMAG00000004043	CHD9	99	98.507	Ursus_maritimus
ENSBTAG00000002287	CHD9	97	96.728	ENSVPAG00000001374	CHD9	97	96.728	Vicugna_pacos
ENSBTAG00000002287	CHD9	100	96.865	ENSVVUG00000019435	CHD9	100	96.865	Vulpes_vulpes
ENSBTAG00000002287	CHD9	99	73.791	ENSXETG00000000349	chd9	96	77.343	Xenopus_tropicalis
ENSBTAG00000002287	CHD9	79	70.957	ENSXCOG00000012997	chd9	98	68.543	Xiphophorus_couchianus
ENSBTAG00000002287	CHD9	84	70.625	ENSXMAG00000016192	chd9	98	68.326	Xiphophorus_maculatus