EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000002345 (Gene tree)
Gene ID: 782887
Gene Symbol: SETD1A
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 27767 bases
Position: chr25:27095052-27122818
Accession: 34492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000003027	RRM_1	PF00076.22	8.2e-06	1	1
ENSBTAP00000068889	RRM_1	PF00076.22	8.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000003027	-	6612	XM_005224969	ENSBTAP00000003027	1708 (aa)	XP_005225026	E1BLX2
ENSBTAT00000070677	-	9862	-	ENSBTAP00000068889	1708 (aa)	XP_010817751	UPI0000EBE4E7

Gene Model

Click here to download ENSBTAG00000002345's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000002345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000002345	SETD1A	100	92.177	ENSG00000099381	SETD1A	100	91.953	Homo_sapiens
ENSBTAG00000002345	SETD1A	77	62.032	ENSAPLG00000005217	SETD1B	54	70.861	Anas_platyrhynchos
ENSBTAG00000002345	SETD1A	100	91.715	ENSCJAG00000003000	SETD1A	100	91.434	Callithrix_jacchus
ENSBTAG00000002345	SETD1A	100	93.434	ENSCAFG00000016758	SETD1A	100	92.969	Canis_familiaris
ENSBTAG00000002345	SETD1A	100	93.735	ENSCAFG00020018051	SETD1A	100	93.213	Canis_lupus_dingo
ENSBTAG00000002345	SETD1A	100	98.596	ENSCHIG00000025896	SETD1A	100	98.596	Capra_hircus
ENSBTAG00000002345	SETD1A	100	91.419	ENSCPOG00000025456	SETD1A	100	90.787	Cavia_porcellus
ENSBTAG00000002345	SETD1A	100	91.482	ENSCCAG00000025600	SETD1A	100	91.200	Cebus_capucinus
ENSBTAG00000002345	SETD1A	100	91.725	ENSCATG00000035417	SETD1A	100	91.036	Cercocebus_atys
ENSBTAG00000002345	SETD1A	100	89.983	ENSCLAG00000011583	SETD1A	100	97.976	Chinchilla_lanigera
ENSBTAG00000002345	SETD1A	100	91.540	ENSCSAG00000005791	SETD1A	100	91.550	Chlorocebus_sabaeus
ENSBTAG00000002345	SETD1A	100	89.203	ENSCGRG00001022425	-	100	89.030	Cricetulus_griseus_chok1gshd
ENSBTAG00000002345	SETD1A	100	89.261	ENSCGRG00000016965	-	100	89.088	Cricetulus_griseus_crigri
ENSBTAG00000002345	SETD1A	100	94.574	ENSFCAG00000002588	SETD1A	100	94.457	Felis_catus
ENSBTAG00000002345	SETD1A	100	90.251	ENSGGOG00000016052	SETD1A	100	90.087	Gorilla_gorilla
ENSBTAG00000002345	SETD1A	100	93.641	ENSSTOG00000005369	SETD1A	100	92.940	Ictidomys_tridecemlineatus
ENSBTAG00000002345	SETD1A	100	90.117	ENSLAFG00000023335	SETD1A	100	90.117	Loxodonta_africana
ENSBTAG00000002345	SETD1A	100	91.434	ENSMFAG00000003435	SETD1A	100	91.502	Macaca_fascicularis
ENSBTAG00000002345	SETD1A	100	90.967	ENSMMUG00000003233	SETD1A	100	96.761	Macaca_mulatta
ENSBTAG00000002345	SETD1A	100	91.429	ENSMLEG00000030176	SETD1A	100	90.845	Mandrillus_leucophaeus
ENSBTAG00000002345	SETD1A	100	92.878	ENSMICG00000001575	SETD1A	100	92.177	Microcebus_murinus
ENSBTAG00000002345	SETD1A	100	87.464	ENSMOCG00000012528	-	100	88.566	Microtus_ochrogaster
ENSBTAG00000002345	SETD1A	100	90.501	ENSPPRG00000012737	SETD1A	100	89.860	Panthera_pardus
ENSBTAG00000002345	SETD1A	100	92.002	ENSPTRG00000008024	SETD1A	100	91.778	Pan_troglodytes
ENSBTAG00000002345	SETD1A	100	90.909	ENSPANG00000025141	SETD1A	100	90.570	Papio_anubis
ENSBTAG00000002345	SETD1A	100	87.753	ENSPEMG00000024243	-	100	95.935	Peromyscus_maniculatus_bairdii
ENSBTAG00000002345	SETD1A	100	92.056	ENSPCOG00000020896	SETD1A	100	91.939	Propithecus_coquereli
ENSBTAG00000002345	SETD1A	100	88.728	ENSRNOG00000055028	Setd1a	100	88.555	Rattus_norvegicus
ENSBTAG00000002345	SETD1A	100	90.174	ENSSBOG00000020392	SETD1A	100	90.418	Saimiri_boliviensis_boliviensis
ENSBTAG00000002345	SETD1A	61	62.460	ENSSPUG00000011847	SETD1B	55	62.460	Sphenodon_punctatus
ENSBTAG00000002345	SETD1A	56	99.375	ENSSSCG00000007782	SETD1A	95	99.375	Sus_scrofa
ENSBTAG00000002345	SETD1A	54	70.358	ENSSSCG00000009806	SETD1B	72	70.530	Sus_scrofa
ENSBTAG00000002345	SETD1A	64	68.954	ENSTNIG00000009090	setd1ba	50	68.954	Tetraodon_nigroviridis
ENSBTAG00000002345	SETD1A	100	95.029	ENSTTRG00000015493	SETD1A	100	94.503	Tursiops_truncatus