EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000002356 (Gene tree)
Gene ID: 540831
Gene Symbol: RBM47
Alias: -
Full Name: Bos taurus RNA binding motif protein 47 (RBM47)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 276361 bases
Position: chr6:59387155-59663515
Accession: NM_001206034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000003040	RRM_1	PF00076.22	6.6e-38	1	3
ENSBTAP00000003040	RRM_1	PF00076.22	6.6e-38	2	3
ENSBTAP00000003040	RRM_1	PF00076.22	6.6e-38	3	3
ENSBTAP00000057526	RRM_1	PF00076.22	6.6e-38	1	3
ENSBTAP00000057526	RRM_1	PF00076.22	6.6e-38	2	3
ENSBTAP00000057526	RRM_1	PF00076.22	6.6e-38	3	3
ENSBTAP00000060045	RRM_1	PF00076.22	6.6e-38	1	3
ENSBTAP00000060045	RRM_1	PF00076.22	6.6e-38	2	3
ENSBTAP00000060045	RRM_1	PF00076.22	6.6e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000003040	-	4128	-	ENSBTAP00000003040	591 (aa)	XP_005207942	F6RYN2
ENSBTAT00000083675	-	4271	-	ENSBTAP00000060045	591 (aa)	XP_005207942	UPI00004F605C
ENSBTAT00000073219	-	4872	XM_005207883	ENSBTAP00000057526	591 (aa)	XP_005207940	UPI00004F605C

Gene Model

Click here to download ENSBTAG00000002356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000002356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000002356	RBM47	52	54.516	ENSBTAG00000006672	SYNCRIP	68	46.172
ENSBTAG00000002356	RBM47	56	68.468	ENSBTAG00000001696	RBM46	65	71.293
ENSBTAG00000002356	RBM47	73	59.688	ENSBTAG00000021195	A1CF	81	59.243
ENSBTAG00000002356	RBM47	52	56.129	ENSBTAG00000016578	HNRNPR	71	45.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000002356	RBM47	100	97.143	ENSG00000163694	RBM47	100	98.618	Homo_sapiens
ENSBTAG00000002356	RBM47	100	77.759	ENSAPOG00000011062	rbm47	100	79.847	Acanthochromis_polyacanthus
ENSBTAG00000002356	RBM47	100	96.482	ENSAMEG00000009672	RBM47	100	96.482	Ailuropoda_melanoleuca
ENSBTAG00000002356	RBM47	100	77.517	ENSACIG00000011531	rbm47	100	76.846	Amphilophus_citrinellus
ENSBTAG00000002356	RBM47	100	78.319	ENSAOCG00000022245	rbm47	100	79.847	Amphiprion_ocellaris
ENSBTAG00000002356	RBM47	100	78.319	ENSAPEG00000018304	rbm47	100	79.847	Amphiprion_percula
ENSBTAG00000002356	RBM47	100	77.705	ENSATEG00000018400	rbm47	100	75.777	Anabas_testudineus
ENSBTAG00000002356	RBM47	100	88.533	ENSAPLG00000013974	RBM47	100	88.364	Anas_platyrhynchos
ENSBTAG00000002356	RBM47	100	86.333	ENSACAG00000011833	RBM47	100	86.500	Anolis_carolinensis
ENSBTAG00000002356	RBM47	100	97.143	ENSANAG00000029440	RBM47	100	97.143	Aotus_nancymaae
ENSBTAG00000002356	RBM47	100	76.432	ENSACLG00000016902	rbm47	100	81.186	Astatotilapia_calliptera
ENSBTAG00000002356	RBM47	100	75.862	ENSAMXG00000021794	rbm47	100	75.534	Astyanax_mexicanus
ENSBTAG00000002356	RBM47	100	96.812	ENSCJAG00000019385	RBM47	100	96.812	Callithrix_jacchus
ENSBTAG00000002356	RBM47	96	95.088	ENSCAFG00000015898	RBM47	100	93.266	Canis_familiaris
ENSBTAG00000002356	RBM47	87	95.728	ENSCAFG00020010558	RBM47	94	95.588	Canis_lupus_dingo
ENSBTAG00000002356	RBM47	100	99.662	ENSCHIG00000026214	RBM47	100	99.662	Capra_hircus
ENSBTAG00000002356	RBM47	78	88.532	ENSTSYG00000033612	RBM47	92	89.381	Carlito_syrichta
ENSBTAG00000002356	RBM47	100	88.870	ENSCAPG00000008426	RBM47	100	88.027	Cavia_aperea
ENSBTAG00000002356	RBM47	100	96.627	ENSCPOG00000014100	RBM47	100	96.627	Cavia_porcellus
ENSBTAG00000002356	RBM47	99	67.508	ENSCCAG00000024397	-	99	66.214	Cebus_capucinus
ENSBTAG00000002356	RBM47	100	96.812	ENSCCAG00000030129	-	100	96.812	Cebus_capucinus
ENSBTAG00000002356	RBM47	100	97.124	ENSCATG00000042064	RBM47	100	97.124	Cercocebus_atys
ENSBTAG00000002356	RBM47	100	96.284	ENSCLAG00000001684	RBM47	100	96.284	Chinchilla_lanigera
ENSBTAG00000002356	RBM47	100	96.975	ENSCSAG00000017060	RBM47	100	96.975	Chlorocebus_sabaeus
ENSBTAG00000002356	RBM47	88	93.671	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSBTAG00000002356	RBM47	100	91.443	ENSCPBG00000013831	RBM47	100	91.107	Chrysemys_picta_bellii
ENSBTAG00000002356	RBM47	100	96.954	ENSCANG00000019997	RBM47	100	96.954	Colobus_angolensis_palliatus
ENSBTAG00000002356	RBM47	100	64.901	ENSCGRG00001020102	-	100	73.435	Cricetulus_griseus_chok1gshd
ENSBTAG00000002356	RBM47	100	92.953	ENSCGRG00001000623	-	100	93.121	Cricetulus_griseus_chok1gshd
ENSBTAG00000002356	RBM47	100	92.114	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSBTAG00000002356	RBM47	100	64.570	ENSCGRG00000014760	-	100	73.096	Cricetulus_griseus_crigri
ENSBTAG00000002356	RBM47	100	75.585	ENSCSEG00000004545	rbm47	100	73.993	Cynoglossus_semilaevis
ENSBTAG00000002356	RBM47	100	76.303	ENSCVAG00000020144	rbm47	100	80.102	Cyprinodon_variegatus
ENSBTAG00000002356	RBM47	100	77.265	ENSDARG00000061985	rbm47	100	76.606	Danio_rerio
ENSBTAG00000002356	RBM47	100	96.108	ENSDNOG00000046854	RBM47	100	96.108	Dasypus_novemcinctus
ENSBTAG00000002356	RBM47	100	95.310	ENSDORG00000010144	Rbm47	100	95.310	Dipodomys_ordii
ENSBTAG00000002356	RBM47	100	95.310	ENSETEG00000009194	RBM47	100	95.310	Echinops_telfairi
ENSBTAG00000002356	RBM47	99	57.661	ENSEBUG00000011912	rbm47	99	58.320	Eptatretus_burgeri
ENSBTAG00000002356	RBM47	100	98.646	ENSEASG00005008443	RBM47	100	98.646	Equus_asinus_asinus
ENSBTAG00000002356	RBM47	100	98.646	ENSECAG00000004400	RBM47	100	98.646	Equus_caballus
ENSBTAG00000002356	RBM47	75	95.671	ENSEEUG00000001194	RBM47	75	95.671	Erinaceus_europaeus
ENSBTAG00000002356	RBM47	99	75.879	ENSELUG00000006148	rbm47	97	81.794	Esox_lucius
ENSBTAG00000002356	RBM47	100	98.308	ENSFCAG00000012399	RBM47	100	98.308	Felis_catus
ENSBTAG00000002356	RBM47	100	91.261	ENSFALG00000002861	RBM47	100	91.597	Ficedula_albicollis
ENSBTAG00000002356	RBM47	100	94.595	ENSFDAG00000016326	RBM47	100	94.595	Fukomys_damarensis
ENSBTAG00000002356	RBM47	100	77.349	ENSFHEG00000007938	rbm47	100	75.336	Fundulus_heteroclitus
ENSBTAG00000002356	RBM47	100	74.634	ENSGMOG00000014802	rbm47	100	74.146	Gadus_morhua
ENSBTAG00000002356	RBM47	64	92.287	ENSGALG00000014267	RBM47	100	92.042	Gallus_gallus
ENSBTAG00000002356	RBM47	64	83.511	ENSGAFG00000020571	rbm47	98	81.963	Gambusia_affinis
ENSBTAG00000002356	RBM47	100	74.183	ENSGACG00000016223	rbm47	100	78.571	Gasterosteus_aculeatus
ENSBTAG00000002356	RBM47	100	91.611	ENSGAGG00000020051	RBM47	100	91.275	Gopherus_agassizii
ENSBTAG00000002356	RBM47	100	97.124	ENSGGOG00000001367	RBM47	100	97.124	Gorilla_gorilla
ENSBTAG00000002356	RBM47	100	76.183	ENSHBUG00000003520	rbm47	100	81.186	Haplochromis_burtoni
ENSBTAG00000002356	RBM47	84	91.870	ENSHGLG00000016914	RBM47	100	95.570	Heterocephalus_glaber_female
ENSBTAG00000002356	RBM47	100	95.270	ENSHGLG00100014028	-	100	95.570	Heterocephalus_glaber_male
ENSBTAG00000002356	RBM47	100	85.448	ENSHGLG00100003071	-	100	84.264	Heterocephalus_glaber_male
ENSBTAG00000002356	RBM47	99	76.884	ENSHCOG00000002074	rbm47	99	78.316	Hippocampus_comes
ENSBTAG00000002356	RBM47	100	77.983	ENSIPUG00000004743	rbm47	100	76.975	Ictalurus_punctatus
ENSBTAG00000002356	RBM47	100	96.980	ENSSTOG00000004727	RBM47	100	96.980	Ictidomys_tridecemlineatus
ENSBTAG00000002356	RBM47	100	93.970	ENSJJAG00000013823	Rbm47	100	95.142	Jaculus_jaculus
ENSBTAG00000002356	RBM47	100	78.392	ENSKMAG00000000084	rbm47	100	78.827	Kryptolebias_marmoratus
ENSBTAG00000002356	RBM47	100	77.090	ENSLBEG00000008436	rbm47	100	77.041	Labrus_bergylta
ENSBTAG00000002356	RBM47	100	85.882	ENSLACG00000007196	RBM47	100	85.210	Latimeria_chalumnae
ENSBTAG00000002356	RBM47	100	82.521	ENSLOCG00000012966	rbm47	95	81.345	Lepisosteus_oculatus
ENSBTAG00000002356	RBM47	100	95.798	ENSLAFG00000011998	RBM47	100	95.798	Loxodonta_africana
ENSBTAG00000002356	RBM47	100	97.124	ENSMFAG00000037967	RBM47	100	97.124	Macaca_fascicularis
ENSBTAG00000002356	RBM47	100	96.975	ENSMMUG00000012036	RBM47	100	98.446	Macaca_mulatta
ENSBTAG00000002356	RBM47	100	97.124	ENSMNEG00000040774	RBM47	100	97.124	Macaca_nemestrina
ENSBTAG00000002356	RBM47	100	98.730	ENSMLEG00000041432	RBM47	100	98.730	Mandrillus_leucophaeus
ENSBTAG00000002356	RBM47	100	77.011	ENSMAMG00000019143	rbm47	100	77.995	Mastacembelus_armatus
ENSBTAG00000002356	RBM47	100	76.432	ENSMZEG00005023659	rbm47	100	75.777	Maylandia_zebra
ENSBTAG00000002356	RBM47	100	90.635	ENSMGAG00000012226	RBM47	100	90.468	Meleagris_gallopavo
ENSBTAG00000002356	RBM47	100	93.782	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSBTAG00000002356	RBM47	100	89.509	ENSMICG00000026417	RBM47	100	91.371	Microcebus_murinus
ENSBTAG00000002356	RBM47	100	94.444	ENSMOCG00000021170	Rbm47	100	96.835	Microtus_ochrogaster
ENSBTAG00000002356	RBM47	100	77.213	ENSMMOG00000007260	rbm47	100	74.918	Mola_mola
ENSBTAG00000002356	RBM47	52	82.315	ENSMODG00000015426	-	97	79.487	Monodelphis_domestica
ENSBTAG00000002356	RBM47	100	91.737	ENSMODG00000007003	RBM47	100	91.231	Monodelphis_domestica
ENSBTAG00000002356	RBM47	100	81.895	ENSMODG00000020561	-	100	82.234	Monodelphis_domestica
ENSBTAG00000002356	RBM47	100	77.349	ENSMALG00000005167	rbm47	100	79.744	Monopterus_albus
ENSBTAG00000002356	RBM47	100	93.929	MGP_CAROLIEiJ_G0027258	Rbm47	100	94.266	Mus_caroli
ENSBTAG00000002356	RBM47	100	94.266	ENSMUSG00000070780	Rbm47	100	94.604	Mus_musculus
ENSBTAG00000002356	RBM47	100	94.266	MGP_PahariEiJ_G0017040	Rbm47	100	94.604	Mus_pahari
ENSBTAG00000002356	RBM47	100	94.755	MGP_SPRETEiJ_G0028253	Rbm47	100	94.755	Mus_spretus
ENSBTAG00000002356	RBM47	100	97.475	ENSMPUG00000006177	RBM47	94	97.475	Mustela_putorius_furo
ENSBTAG00000002356	RBM47	100	94.426	ENSMLUG00000000889	RBM47	100	94.595	Myotis_lucifugus
ENSBTAG00000002356	RBM47	100	94.622	ENSNGAG00000003325	Rbm47	100	95.126	Nannospalax_galili
ENSBTAG00000002356	RBM47	100	76.307	ENSNBRG00000015092	rbm47	100	75.817	Neolamprologus_brichardi
ENSBTAG00000002356	RBM47	100	96.785	ENSNLEG00000017151	RBM47	100	96.785	Nomascus_leucogenys
ENSBTAG00000002356	RBM47	72	87.150	ENSMEUG00000009516	-	99	86.215	Notamacropus_eugenii
ENSBTAG00000002356	RBM47	75	96.281	ENSOPRG00000016507	-	75	96.281	Ochotona_princeps
ENSBTAG00000002356	RBM47	100	96.791	ENSODEG00000004873	RBM47	100	96.791	Octodon_degus
ENSBTAG00000002356	RBM47	100	76.596	ENSONIG00000009061	rbm47	100	75.286	Oreochromis_niloticus
ENSBTAG00000002356	RBM47	100	87.458	ENSOANG00000008978	RBM47	100	87.960	Ornithorhynchus_anatinus
ENSBTAG00000002356	RBM47	100	96.453	ENSOCUG00000012034	RBM47	100	96.453	Oryctolagus_cuniculus
ENSBTAG00000002356	RBM47	100	77.517	ENSORLG00000005847	rbm47	100	79.434	Oryzias_latipes
ENSBTAG00000002356	RBM47	100	77.685	ENSORLG00020005154	rbm47	100	79.434	Oryzias_latipes_hni
ENSBTAG00000002356	RBM47	100	78.020	ENSORLG00015000066	rbm47	100	79.692	Oryzias_latipes_hsok
ENSBTAG00000002356	RBM47	100	79.027	ENSOMEG00000010730	rbm47	100	77.349	Oryzias_melastigma
ENSBTAG00000002356	RBM47	100	87.986	ENSOGAG00000025193	-	100	87.648	Otolemur_garnettii
ENSBTAG00000002356	RBM47	100	97.306	ENSOGAG00000029367	-	100	97.306	Otolemur_garnettii
ENSBTAG00000002356	RBM47	100	90.863	ENSOARG00000012711	RBM47	100	90.863	Ovis_aries
ENSBTAG00000002356	RBM47	100	96.954	ENSPPAG00000029763	RBM47	100	96.954	Pan_paniscus
ENSBTAG00000002356	RBM47	100	94.924	ENSPPRG00000012873	RBM47	100	94.924	Panthera_pardus
ENSBTAG00000002356	RBM47	85	94.622	ENSPTIG00000017046	RBM47	100	94.622	Panthera_tigris_altaica
ENSBTAG00000002356	RBM47	100	97.124	ENSPTRG00000016006	RBM47	100	97.124	Pan_troglodytes
ENSBTAG00000002356	RBM47	100	97.124	ENSPANG00000005980	RBM47	100	97.124	Papio_anubis
ENSBTAG00000002356	RBM47	96	76.215	ENSPKIG00000013431	RBM47	98	80.620	Paramormyrops_kingsleyae
ENSBTAG00000002356	RBM47	96	78.360	ENSPKIG00000005037	rbm47	100	75.788	Paramormyrops_kingsleyae
ENSBTAG00000002356	RBM47	89	91.856	ENSPSIG00000017516	RBM47	97	91.856	Pelodiscus_sinensis
ENSBTAG00000002356	RBM47	100	75.839	ENSPMGG00000018540	rbm47	100	75.336	Periophthalmus_magnuspinnatus
ENSBTAG00000002356	RBM47	100	94.622	ENSPEMG00000011088	Rbm47	100	95.126	Peromyscus_maniculatus_bairdii
ENSBTAG00000002356	RBM47	96	80.104	ENSPFOG00000007997	rbm47	100	75.447	Poecilia_formosa
ENSBTAG00000002356	RBM47	96	79.896	ENSPLAG00000002072	rbm47	100	82.181	Poecilia_latipinna
ENSBTAG00000002356	RBM47	100	78.798	ENSPMEG00000017492	rbm47	100	80.102	Poecilia_mexicana
ENSBTAG00000002356	RBM47	96	80.243	ENSPREG00000008456	rbm47	100	82.447	Poecilia_reticulata
ENSBTAG00000002356	RBM47	98	82.264	ENSPPYG00000014688	RBM47	100	82.095	Pongo_abelii
ENSBTAG00000002356	RBM47	81	97.007	ENSPCAG00000011879	RBM47	81	97.007	Procavia_capensis
ENSBTAG00000002356	RBM47	100	92.217	ENSPCOG00000023451	RBM47	100	92.217	Propithecus_coquereli
ENSBTAG00000002356	RBM47	100	96.465	ENSPVAG00000003812	RBM47	100	96.465	Pteropus_vampyrus
ENSBTAG00000002356	RBM47	100	75.896	ENSPNYG00000022868	rbm47	100	75.407	Pundamilia_nyererei
ENSBTAG00000002356	RBM47	100	76.683	ENSPNAG00000007940	rbm47	100	76.026	Pygocentrus_nattereri
ENSBTAG00000002356	RBM47	100	94.435	ENSRNOG00000002408	Rbm47	100	94.772	Rattus_norvegicus
ENSBTAG00000002356	RBM47	100	96.954	ENSRBIG00000039601	RBM47	100	96.954	Rhinopithecus_bieti
ENSBTAG00000002356	RBM47	100	96.954	ENSRROG00000044696	RBM47	100	96.954	Rhinopithecus_roxellana
ENSBTAG00000002356	RBM47	100	93.401	ENSSBOG00000028475	RBM47	100	97.526	Saimiri_boliviensis_boliviensis
ENSBTAG00000002356	RBM47	100	92.893	ENSSHAG00000017576	RBM47	100	92.047	Sarcophilus_harrisii
ENSBTAG00000002356	RBM47	100	75.377	ENSSFOG00015024101	RBM47	100	74.874	Scleropages_formosus
ENSBTAG00000002356	RBM47	100	74.007	ENSSFOG00015012445	rbm47	100	72.637	Scleropages_formosus
ENSBTAG00000002356	RBM47	100	75.738	ENSSMAG00000009744	rbm47	100	78.974	Scophthalmus_maximus
ENSBTAG00000002356	RBM47	100	78.859	ENSSDUG00000022684	rbm47	100	77.219	Seriola_dumerili
ENSBTAG00000002356	RBM47	100	79.195	ENSSLDG00000003109	rbm47	100	78.788	Seriola_lalandi_dorsalis
ENSBTAG00000002356	RBM47	85	96.205	ENSSARG00000001735	RBM47	75	96.205	Sorex_araneus
ENSBTAG00000002356	RBM47	100	88.403	ENSSPUG00000007515	RBM47	100	89.096	Sphenodon_punctatus
ENSBTAG00000002356	RBM47	100	79.195	ENSSPAG00000001257	rbm47	100	80.612	Stegastes_partitus
ENSBTAG00000002356	RBM47	100	99.154	ENSSSCG00000008796	RBM47	100	99.154	Sus_scrofa
ENSBTAG00000002356	RBM47	100	90.741	ENSTGUG00000008705	RBM47	100	90.909	Taeniopygia_guttata
ENSBTAG00000002356	RBM47	98	77.172	ENSTRUG00000014050	rbm47	100	74.787	Takifugu_rubripes
ENSBTAG00000002356	RBM47	100	76.393	ENSTNIG00000006127	rbm47	100	74.384	Tetraodon_nigroviridis
ENSBTAG00000002356	RBM47	77	91.139	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSBTAG00000002356	RBM47	100	97.970	ENSTTRG00000002839	RBM47	100	97.970	Tursiops_truncatus
ENSBTAG00000002356	RBM47	100	97.306	ENSUAMG00000021346	RBM47	100	97.306	Ursus_americanus
ENSBTAG00000002356	RBM47	57	97.945	ENSVPAG00000000641	-	57	97.945	Vicugna_pacos
ENSBTAG00000002356	RBM47	100	95.278	ENSVVUG00000014774	RBM47	100	95.278	Vulpes_vulpes
ENSBTAG00000002356	RBM47	100	86.172	ENSXETG00000012802	rbm47	100	86.172	Xenopus_tropicalis
ENSBTAG00000002356	RBM47	88	83.245	ENSXCOG00000000780	rbm47	100	81.915	Xiphophorus_couchianus
ENSBTAG00000002356	RBM47	100	77.685	ENSXMAG00000009874	rbm47	100	79.592	Xiphophorus_maculatus