EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000002520 (Gene tree)
Gene ID: 540475
Gene Symbol: CELF1
Alias: -
Full Name: Bos taurus CUGBP Elav-like family member 1 (CELF1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 79171 bases
Position: chr15:77288832-77368002
Accession: NM_001101212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000003274	RRM_1	PF00076.22	2.7e-52	1	3
ENSBTAP00000003274	RRM_1	PF00076.22	2.7e-52	2	3
ENSBTAP00000003274	RRM_1	PF00076.22	2.7e-52	3	3
ENSBTAP00000065075	RRM_1	PF00076.22	2.7e-52	1	3
ENSBTAP00000065075	RRM_1	PF00076.22	2.7e-52	2	3
ENSBTAP00000065075	RRM_1	PF00076.22	2.7e-52	3	3
ENSBTAP00000069764	RRM_1	PF00076.22	2.7e-52	1	3
ENSBTAP00000069764	RRM_1	PF00076.22	2.7e-52	2	3
ENSBTAP00000069764	RRM_1	PF00076.22	2.7e-52	3	3
ENSBTAP00000071693	RRM_1	PF00076.22	2.7e-52	1	3
ENSBTAP00000071693	RRM_1	PF00076.22	2.7e-52	2	3
ENSBTAP00000071693	RRM_1	PF00076.22	2.7e-52	3	3
ENSBTAP00000071348	RRM_1	PF00076.22	3.4e-52	1	3
ENSBTAP00000071348	RRM_1	PF00076.22	3.4e-52	2	3
ENSBTAP00000071348	RRM_1	PF00076.22	3.4e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000071030	-	2802	-	ENSBTAP00000069764	486 (aa)	-	UPI0000EBD7BA
ENSBTAT00000077828	-	1642	-	ENSBTAP00000065075	486 (aa)	-	UPI0000EBD7BA
ENSBTAT00000069117	-	2913	-	ENSBTAP00000071348	513 (aa)	XP_024831247	UPI00005BE4D5
ENSBTAT00000077948	-	2761	-	ENSBTAP00000071693	486 (aa)	-	UPI0000EBD7BA
ENSBTAT00000003274	-	2243	-	ENSBTAP00000003274	486 (aa)	-	A7MB95

Gene Model

Click here to download ENSBTAG00000002520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000002520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000002520	CELF1	56	43.590	ENSBTAG00000014412	ELAVL3	73	42.391
ENSBTAG00000002520	CELF1	58	36.486	ENSBTAG00000046902	PABPC4L	56	36.486
ENSBTAG00000002520	CELF1	69	41.975	ENSBTAG00000046348	ELAVL2	82	41.975
ENSBTAG00000002520	CELF1	100	78.004	ENSBTAG00000008937	CELF2	100	75.610
ENSBTAG00000002520	CELF1	61	40.741	ENSBTAG00000021046	ELAVL4	78	40.741
ENSBTAG00000002520	CELF1	85	78.049	ENSBTAG00000004940	CELF4	60	78.049
ENSBTAG00000002520	CELF1	97	44.512	ENSBTAG00000019131	CELF3	90	51.095
ENSBTAG00000002520	CELF1	55	45.679	ENSBTAG00000000613	ELAVL1	81	45.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000002520	CELF1	100	98.765	ENSG00000149187	CELF1	100	100.000	Homo_sapiens
ENSBTAG00000002520	CELF1	100	84.178	ENSAPOG00000024000	celf1	100	85.193	Acanthochromis_polyacanthus
ENSBTAG00000002520	CELF1	100	99.415	ENSAMEG00000007596	CELF1	100	99.415	Ailuropoda_melanoleuca
ENSBTAG00000002520	CELF1	100	82.172	ENSACIG00000023843	celf1	100	81.148	Amphilophus_citrinellus
ENSBTAG00000002520	CELF1	100	84.178	ENSAOCG00000001252	celf1	100	85.193	Amphiprion_ocellaris
ENSBTAG00000002520	CELF1	100	84.381	ENSAPEG00000002340	celf1	100	85.462	Amphiprion_percula
ENSBTAG00000002520	CELF1	100	83.162	ENSATEG00000010871	celf1	100	82.341	Anabas_testudineus
ENSBTAG00000002520	CELF1	100	95.082	ENSACAG00000002114	CELF1	100	93.762	Anolis_carolinensis
ENSBTAG00000002520	CELF1	100	98.830	ENSANAG00000031770	CELF1	100	98.830	Aotus_nancymaae
ENSBTAG00000002520	CELF1	100	85.409	ENSACLG00000010181	-	100	85.409	Astatotilapia_calliptera
ENSBTAG00000002520	CELF1	100	82.341	ENSAMXG00000020576	celf1	96	81.262	Astyanax_mexicanus
ENSBTAG00000002520	CELF1	100	98.638	ENSCJAG00000020133	CELF1	100	98.638	Callithrix_jacchus
ENSBTAG00000002520	CELF1	100	99.220	ENSCAFG00000008452	CELF1	100	99.220	Canis_familiaris
ENSBTAG00000002520	CELF1	100	99.220	ENSCAFG00020025487	CELF1	100	99.220	Canis_lupus_dingo
ENSBTAG00000002520	CELF1	100	99.025	ENSCHIG00000024582	CELF1	100	99.025	Capra_hircus
ENSBTAG00000002520	CELF1	100	98.765	ENSTSYG00000003866	CELF1	100	98.765	Carlito_syrichta
ENSBTAG00000002520	CELF1	99	72.500	ENSCAPG00000006787	CELF1	100	71.012	Cavia_aperea
ENSBTAG00000002520	CELF1	100	98.768	ENSCPOG00000036381	CELF1	100	98.768	Cavia_porcellus
ENSBTAG00000002520	CELF1	100	98.765	ENSCCAG00000033487	CELF1	100	98.765	Cebus_capucinus
ENSBTAG00000002520	CELF1	100	98.765	ENSCATG00000040143	CELF1	100	98.765	Cercocebus_atys
ENSBTAG00000002520	CELF1	100	98.765	ENSCLAG00000011791	CELF1	100	98.635	Chinchilla_lanigera
ENSBTAG00000002520	CELF1	100	98.635	ENSCSAG00000005786	CELF1	100	98.635	Chlorocebus_sabaeus
ENSBTAG00000002520	CELF1	62	100.000	ENSCHOG00000004196	-	68	100.000	Choloepus_hoffmanni
ENSBTAG00000002520	CELF1	100	96.516	ENSCPBG00000022914	CELF1	100	96.319	Chrysemys_picta_bellii
ENSBTAG00000002520	CELF1	100	98.635	ENSCANG00000032689	CELF1	100	98.635	Colobus_angolensis_palliatus
ENSBTAG00000002520	CELF1	100	98.246	ENSCGRG00001011274	Celf1	100	98.246	Cricetulus_griseus_chok1gshd
ENSBTAG00000002520	CELF1	100	98.246	ENSCGRG00000015357	Celf1	100	98.246	Cricetulus_griseus_crigri
ENSBTAG00000002520	CELF1	100	74.743	ENSCSEG00000008675	celf1	100	73.717	Cynoglossus_semilaevis
ENSBTAG00000002520	CELF1	100	83.004	ENSDARG00000005315	celf1	100	88.757	Danio_rerio
ENSBTAG00000002520	CELF1	100	98.830	ENSDNOG00000009523	CELF1	100	98.765	Dasypus_novemcinctus
ENSBTAG00000002520	CELF1	100	88.109	ENSDORG00000013721	Celf1	100	88.109	Dipodomys_ordii
ENSBTAG00000002520	CELF1	73	100.000	ENSETEG00000004507	CELF1	83	100.000	Echinops_telfairi
ENSBTAG00000002520	CELF1	100	91.440	ENSEASG00005010831	CELF1	100	91.051	Equus_asinus_asinus
ENSBTAG00000002520	CELF1	100	99.220	ENSECAG00000007741	CELF1	100	98.441	Equus_caballus
ENSBTAG00000002520	CELF1	100	81.276	ENSEEUG00000009782	CELF1	100	81.276	Erinaceus_europaeus
ENSBTAG00000002520	CELF1	100	83.368	ENSELUG00000023173	celf1	100	82.937	Esox_lucius
ENSBTAG00000002520	CELF1	100	99.220	ENSFCAG00000002535	CELF1	100	99.220	Felis_catus
ENSBTAG00000002520	CELF1	100	94.961	ENSFALG00000006402	CELF1	100	93.580	Ficedula_albicollis
ENSBTAG00000002520	CELF1	100	98.765	ENSFDAG00000008517	CELF1	100	98.563	Fukomys_damarensis
ENSBTAG00000002520	CELF1	100	83.673	ENSGMOG00000012783	celf1	99	83.130	Gadus_morhua
ENSBTAG00000002520	CELF1	100	95.543	ENSGALG00000008097	CELF1	100	95.543	Gallus_gallus
ENSBTAG00000002520	CELF1	100	78.373	ENSGACG00000014226	celf1	95	78.261	Gasterosteus_aculeatus
ENSBTAG00000002520	CELF1	100	96.516	ENSGAGG00000011562	CELF1	100	95.697	Gopherus_agassizii
ENSBTAG00000002520	CELF1	100	98.638	ENSGGOG00000004106	CELF1	100	98.638	Gorilla_gorilla
ENSBTAG00000002520	CELF1	100	85.409	ENSHBUG00000017881	celf1	100	85.409	Haplochromis_burtoni
ENSBTAG00000002520	CELF1	100	90.144	ENSHGLG00000019214	-	100	89.733	Heterocephalus_glaber_female
ENSBTAG00000002520	CELF1	100	98.357	ENSHGLG00000006909	-	100	98.357	Heterocephalus_glaber_female
ENSBTAG00000002520	CELF1	100	93.224	ENSHGLG00100017423	-	100	92.813	Heterocephalus_glaber_male
ENSBTAG00000002520	CELF1	100	98.357	ENSHGLG00100013863	-	100	98.357	Heterocephalus_glaber_male
ENSBTAG00000002520	CELF1	100	85.656	ENSHCOG00000000258	celf1	100	84.836	Hippocampus_comes
ENSBTAG00000002520	CELF1	100	81.980	ENSIPUG00000023708	celf1	100	82.376	Ictalurus_punctatus
ENSBTAG00000002520	CELF1	100	98.765	ENSSTOG00000000613	CELF1	100	98.635	Ictidomys_tridecemlineatus
ENSBTAG00000002520	CELF1	100	98.830	ENSJJAG00000020280	Celf1	100	98.830	Jaculus_jaculus
ENSBTAG00000002520	CELF1	70	84.956	ENSLBEG00000002047	-	98	83.186	Labrus_bergylta
ENSBTAG00000002520	CELF1	100	86.242	ENSLBEG00000018296	celf1	93	85.081	Labrus_bergylta
ENSBTAG00000002520	CELF1	71	80.978	ENSLACG00000018990	CELF1	92	81.250	Latimeria_chalumnae
ENSBTAG00000002520	CELF1	100	86.255	ENSLOCG00000005966	celf1	95	85.743	Lepisosteus_oculatus
ENSBTAG00000002520	CELF1	100	98.765	ENSLAFG00000003484	CELF1	100	98.441	Loxodonta_africana
ENSBTAG00000002520	CELF1	100	98.563	ENSMFAG00000003505	CELF1	100	98.563	Macaca_fascicularis
ENSBTAG00000002520	CELF1	100	98.635	ENSMMUG00000011657	CELF1	100	98.635	Macaca_mulatta
ENSBTAG00000002520	CELF1	100	98.765	ENSMNEG00000022558	CELF1	100	98.765	Macaca_nemestrina
ENSBTAG00000002520	CELF1	100	98.830	ENSMLEG00000040834	CELF1	100	98.830	Mandrillus_leucophaeus
ENSBTAG00000002520	CELF1	100	82.992	ENSMAMG00000010052	celf1	100	81.762	Mastacembelus_armatus
ENSBTAG00000002520	CELF1	100	85.409	ENSMZEG00005018307	celf1	100	85.409	Maylandia_zebra
ENSBTAG00000002520	CELF1	100	94.898	ENSMGAG00000010629	CELF1	98	91.650	Meleagris_gallopavo
ENSBTAG00000002520	CELF1	100	98.246	ENSMAUG00000009468	Celf1	100	98.246	Mesocricetus_auratus
ENSBTAG00000002520	CELF1	100	98.638	ENSMICG00000045113	CELF1	100	98.638	Microcebus_murinus
ENSBTAG00000002520	CELF1	100	98.441	ENSMOCG00000012633	Celf1	100	98.441	Microtus_ochrogaster
ENSBTAG00000002520	CELF1	100	82.582	ENSMMOG00000015460	celf1	95	82.582	Mola_mola
ENSBTAG00000002520	CELF1	100	97.119	ENSMODG00000019913	CELF1	100	97.119	Monodelphis_domestica
ENSBTAG00000002520	CELF1	100	98.441	MGP_CAROLIEiJ_G0023949	Celf1	100	98.441	Mus_caroli
ENSBTAG00000002520	CELF1	100	98.441	ENSMUSG00000005506	Celf1	100	98.441	Mus_musculus
ENSBTAG00000002520	CELF1	100	98.441	MGP_PahariEiJ_G0025385	Celf1	100	98.441	Mus_pahari
ENSBTAG00000002520	CELF1	100	98.246	MGP_SPRETEiJ_G0024859	Celf1	100	98.246	Mus_spretus
ENSBTAG00000002520	CELF1	100	99.220	ENSMPUG00000003960	CELF1	93	99.220	Mustela_putorius_furo
ENSBTAG00000002520	CELF1	100	98.259	ENSMLUG00000016631	CELF1	100	98.259	Myotis_lucifugus
ENSBTAG00000002520	CELF1	100	96.881	ENSNGAG00000017390	Celf1	100	96.881	Nannospalax_galili
ENSBTAG00000002520	CELF1	99	55.488	ENSNBRG00000023547	-	85	55.144	Neolamprologus_brichardi
ENSBTAG00000002520	CELF1	100	98.635	ENSNLEG00000014638	CELF1	100	98.635	Nomascus_leucogenys
ENSBTAG00000002520	CELF1	100	97.325	ENSMEUG00000007763	CELF1	100	97.325	Notamacropus_eugenii
ENSBTAG00000002520	CELF1	100	98.354	ENSOPRG00000003239	-	100	98.354	Ochotona_princeps
ENSBTAG00000002520	CELF1	100	98.765	ENSODEG00000015204	CELF1	100	98.635	Octodon_degus
ENSBTAG00000002520	CELF1	100	84.660	ENSONIG00000008300	celf1	100	84.660	Oreochromis_niloticus
ENSBTAG00000002520	CELF1	100	97.331	ENSOANG00000007896	CELF1	99	96.887	Ornithorhynchus_anatinus
ENSBTAG00000002520	CELF1	100	98.765	ENSOCUG00000001311	CELF1	100	98.635	Oryctolagus_cuniculus
ENSBTAG00000002520	CELF1	100	79.346	ENSOMEG00000002381	celf1	100	79.141	Oryzias_melastigma
ENSBTAG00000002520	CELF1	100	97.679	ENSOGAG00000011600	CELF1	100	97.679	Otolemur_garnettii
ENSBTAG00000002520	CELF1	100	98.971	ENSOARG00000006924	CELF1	100	98.971	Ovis_aries
ENSBTAG00000002520	CELF1	100	98.765	ENSPPAG00000033870	CELF1	100	98.765	Pan_paniscus
ENSBTAG00000002520	CELF1	100	99.177	ENSPPRG00000002376	CELF1	100	99.177	Panthera_pardus
ENSBTAG00000002520	CELF1	100	99.220	ENSPTIG00000003974	CELF1	100	99.220	Panthera_tigris_altaica
ENSBTAG00000002520	CELF1	100	98.638	ENSPTRG00000052299	CELF1	100	98.638	Pan_troglodytes
ENSBTAG00000002520	CELF1	100	98.638	ENSPANG00000021676	CELF1	100	98.638	Papio_anubis
ENSBTAG00000002520	CELF1	100	87.090	ENSPKIG00000012324	celf1	100	86.066	Paramormyrops_kingsleyae
ENSBTAG00000002520	CELF1	100	94.070	ENSPSIG00000003922	CELF1	100	93.411	Pelodiscus_sinensis
ENSBTAG00000002520	CELF1	100	86.957	ENSPMGG00000013192	celf1	96	77.505	Periophthalmus_magnuspinnatus
ENSBTAG00000002520	CELF1	100	98.441	ENSPEMG00000015644	Celf1	100	98.441	Peromyscus_maniculatus_bairdii
ENSBTAG00000002520	CELF1	100	97.119	ENSPCIG00000022947	CELF1	100	97.012	Phascolarctos_cinereus
ENSBTAG00000002520	CELF1	70	69.527	ENSPFOG00000000961	-	100	66.864	Poecilia_formosa
ENSBTAG00000002520	CELF1	88	69.883	ENSPLAG00000019373	-	88	66.760	Poecilia_latipinna
ENSBTAG00000002520	CELF1	100	73.786	ENSPREG00000022185	-	100	71.735	Poecilia_reticulata
ENSBTAG00000002520	CELF1	100	97.860	ENSPPYG00000003302	CELF1	100	97.860	Pongo_abelii
ENSBTAG00000002520	CELF1	100	97.531	ENSPCAG00000002631	CELF1	100	97.531	Procavia_capensis
ENSBTAG00000002520	CELF1	100	93.969	ENSPCOG00000021865	CELF1	100	93.580	Propithecus_coquereli
ENSBTAG00000002520	CELF1	97	99.061	ENSPVAG00000007340	CELF1	100	99.061	Pteropus_vampyrus
ENSBTAG00000002520	CELF1	78	73.669	ENSPNYG00000023719	-	88	71.302	Pundamilia_nyererei
ENSBTAG00000002520	CELF1	100	82.376	ENSPNAG00000013418	celf1	96	82.061	Pygocentrus_nattereri
ENSBTAG00000002520	CELF1	100	97.947	ENSRNOG00000010379	Celf1	100	97.947	Rattus_norvegicus
ENSBTAG00000002520	CELF1	100	98.638	ENSRBIG00000042406	CELF1	100	98.638	Rhinopithecus_bieti
ENSBTAG00000002520	CELF1	100	98.830	ENSRROG00000032588	CELF1	100	98.830	Rhinopithecus_roxellana
ENSBTAG00000002520	CELF1	100	87.743	ENSSBOG00000021912	CELF1	100	87.743	Saimiri_boliviensis_boliviensis
ENSBTAG00000002520	CELF1	100	97.125	ENSSHAG00000017438	CELF1	100	97.125	Sarcophilus_harrisii
ENSBTAG00000002520	CELF1	100	87.705	ENSSFOG00015019353	celf1	97	84.872	Scleropages_formosus
ENSBTAG00000002520	CELF1	100	86.680	ENSSMAG00000013827	celf1	96	84.615	Scophthalmus_maximus
ENSBTAG00000002520	CELF1	100	86.066	ENSSDUG00000011558	celf1	96	84.024	Seriola_dumerili
ENSBTAG00000002520	CELF1	100	86.602	ENSSLDG00000012863	celf1	100	86.602	Seriola_lalandi_dorsalis
ENSBTAG00000002520	CELF1	100	93.210	ENSSARG00000003207	CELF1	100	93.210	Sorex_araneus
ENSBTAG00000002520	CELF1	100	96.319	ENSSPUG00000004228	CELF1	100	96.318	Sphenodon_punctatus
ENSBTAG00000002520	CELF1	100	84.178	ENSSPAG00000009569	celf1	100	85.193	Stegastes_partitus
ENSBTAG00000002520	CELF1	100	99.220	ENSSSCG00000013233	CELF1	100	99.220	Sus_scrofa
ENSBTAG00000002520	CELF1	100	96.107	ENSTGUG00000010377	CELF1	100	95.922	Taeniopygia_guttata
ENSBTAG00000002520	CELF1	100	66.258	ENSTRUG00000000617	celf1	100	66.258	Takifugu_rubripes
ENSBTAG00000002520	CELF1	83	98.675	ENSTBEG00000005140	CELF1	83	98.675	Tupaia_belangeri
ENSBTAG00000002520	CELF1	100	99.177	ENSTTRG00000014157	CELF1	100	99.177	Tursiops_truncatus
ENSBTAG00000002520	CELF1	90	99.136	ENSUAMG00000000223	CELF1	100	99.136	Ursus_americanus
ENSBTAG00000002520	CELF1	100	99.220	ENSUMAG00000009218	CELF1	100	99.220	Ursus_maritimus
ENSBTAG00000002520	CELF1	100	85.802	ENSVPAG00000000336	CELF1	100	85.802	Vicugna_pacos
ENSBTAG00000002520	CELF1	100	99.220	ENSVVUG00000023439	CELF1	100	99.220	Vulpes_vulpes
ENSBTAG00000002520	CELF1	100	87.726	ENSXETG00000009044	celf1	100	86.922	Xenopus_tropicalis
ENSBTAG00000002520	CELF1	87	59.292	ENSXCOG00000017706	-	87	59.531	Xiphophorus_couchianus
ENSBTAG00000002520	CELF1	100	72.895	ENSXMAG00000029339	-	100	71.663	Xiphophorus_maculatus