EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000002612 (Gene tree)
Gene ID: 513626
Gene Symbol: FANCM
Alias: -
Full Name: Bos taurus Fanconi anemia complementation group M (FANCM)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 90392 bases
Position: chr21:54856691-54947082
Accession: NM_001104976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000040927	ResIII	PF04851.15	1.4e-18	1	1
ENSBTAP00000059797	ResIII	PF04851.15	4.1e-18	1	1
ENSBTAP00000060519	ResIII	PF04851.15	4.2e-18	1	1
ENSBTAP00000003379	ResIII	PF04851.15	4.2e-18	1	1
ENSBTAP00000073359	ResIII	PF04851.15	4.2e-18	1	1
ENSBTAP00000040927	DEAD	PF00270.29	4.3e-17	1	1
ENSBTAP00000059797	DEAD	PF00270.29	3.7e-16	1	1
ENSBTAP00000060519	DEAD	PF00270.29	3.9e-16	1	1
ENSBTAP00000073359	DEAD	PF00270.29	3.9e-16	1	1
ENSBTAP00000003379	DEAD	PF00270.29	3.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000071085	-	6388	-	ENSBTAP00000073359	2039 (aa)	-	-
ENSBTAT00000082960	-	6289	-	ENSBTAP00000060519	2034 (aa)	-	-
ENSBTAT00000087365	-	6211	-	ENSBTAP00000059797	2008 (aa)	-	-
ENSBTAT00000003379	-	6496	-	ENSBTAP00000003379	2037 (aa)	-	F1MLX2
ENSBTAT00000043352	-	1771	-	ENSBTAP00000040927	373 (aa)	-	A6QPF2

Gene Model

Click here to download ENSBTAG00000002612's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000002612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000002612	FANCM	95	89.888	ENSG00000187790	FANCM	99	89.021	Homo_sapiens
ENSBTAG00000002612	FANCM	94	55.583	ENSAPOG00000014274	-	96	53.630	Acanthochromis_polyacanthus
ENSBTAG00000002612	FANCM	95	92.416	ENSAMEG00000002114	FANCM	100	79.157	Ailuropoda_melanoleuca
ENSBTAG00000002612	FANCM	95	63.305	ENSACIG00000005444	-	96	63.952	Amphilophus_citrinellus
ENSBTAG00000002612	FANCM	73	65.074	ENSAOCG00000005964	-	99	65.074	Amphiprion_ocellaris
ENSBTAG00000002612	FANCM	73	65.074	ENSAPEG00000018344	-	99	65.074	Amphiprion_percula
ENSBTAG00000002612	FANCM	94	56.020	ENSATEG00000012412	-	86	48.543	Anabas_testudineus
ENSBTAG00000002612	FANCM	95	88.764	ENSANAG00000025075	FANCM	100	74.551	Aotus_nancymaae
ENSBTAG00000002612	FANCM	98	55.582	ENSACLG00000016008	-	73	55.505	Astatotilapia_calliptera
ENSBTAG00000002612	FANCM	95	58.270	ENSAMXG00000020275	-	65	54.642	Astyanax_mexicanus
ENSBTAG00000002612	FANCM	95	89.607	ENSCJAG00000015945	FANCM	100	73.943	Callithrix_jacchus
ENSBTAG00000002612	FANCM	95	89.888	ENSCAFG00000014062	FANCM	100	78.058	Canis_familiaris
ENSBTAG00000002612	FANCM	95	89.888	ENSCAFG00020022069	-	99	88.724	Canis_lupus_dingo
ENSBTAG00000002612	FANCM	100	92.759	ENSCHIG00000015176	FANCM	100	92.759	Capra_hircus
ENSBTAG00000002612	FANCM	73	95.604	ENSTSYG00000036497	-	89	92.580	Carlito_syrichta
ENSBTAG00000002612	FANCM	95	84.831	ENSCPOG00000001446	FANCM	100	67.476	Cavia_porcellus
ENSBTAG00000002612	FANCM	95	89.888	ENSCCAG00000026593	FANCM	100	72.498	Cebus_capucinus
ENSBTAG00000002612	FANCM	95	89.326	ENSCATG00000031379	FANCM	100	75.522	Cercocebus_atys
ENSBTAG00000002612	FANCM	95	89.888	ENSCSAG00000015308	FANCM	100	75.716	Chlorocebus_sabaeus
ENSBTAG00000002612	FANCM	81	84.000	ENSCHOG00000000190	FANCM	82	83.429	Choloepus_hoffmanni
ENSBTAG00000002612	FANCM	94	68.750	ENSCPBG00000015089	FANCM	100	49.925	Chrysemys_picta_bellii
ENSBTAG00000002612	FANCM	72	60.148	ENSCING00000002994	-	99	60.370	Ciona_intestinalis
ENSBTAG00000002612	FANCM	95	89.326	ENSCANG00000029498	FANCM	100	75.522	Colobus_angolensis_palliatus
ENSBTAG00000002612	FANCM	95	82.633	ENSCGRG00001023573	Fancm	99	62.573	Cricetulus_griseus_chok1gshd
ENSBTAG00000002612	FANCM	94	55.283	ENSCSEG00000002313	-	92	56.345	Cynoglossus_semilaevis
ENSBTAG00000002612	FANCM	76	69.014	ENSCVAG00000015579	-	67	61.080	Cyprinodon_variegatus
ENSBTAG00000002612	FANCM	82	64.262	ENSDARG00000112136	CABZ01079748.1	100	64.262	Danio_rerio
ENSBTAG00000002612	FANCM	95	89.888	ENSDNOG00000007697	FANCM	100	73.298	Dasypus_novemcinctus
ENSBTAG00000002612	FANCM	95	83.146	ENSDORG00000010095	Fancm	99	65.158	Dipodomys_ordii
ENSBTAG00000002612	FANCM	95	76.685	ENSETEG00000003360	FANCM	81	82.576	Echinops_telfairi
ENSBTAG00000002612	FANCM	83	58.841	ENSEBUG00000014849	-	85	58.610	Eptatretus_burgeri
ENSBTAG00000002612	FANCM	95	89.045	ENSEASG00005007781	FANCM	99	86.787	Equus_asinus_asinus
ENSBTAG00000002612	FANCM	95	89.045	ENSECAG00000018694	FANCM	86	77.151	Equus_caballus
ENSBTAG00000002612	FANCM	88	64.375	ENSEEUG00000005607	-	91	64.375	Erinaceus_europaeus
ENSBTAG00000002612	FANCM	79	66.554	ENSELUG00000015761	-	65	60.324	Esox_lucius
ENSBTAG00000002612	FANCM	95	92.978	ENSFCAG00000022146	-	100	92.308	Felis_catus
ENSBTAG00000002612	FANCM	73	76.190	ENSFALG00000001703	FANCM	79	64.075	Ficedula_albicollis
ENSBTAG00000002612	FANCM	95	85.994	ENSFDAG00000009043	FANCM	100	68.726	Fukomys_damarensis
ENSBTAG00000002612	FANCM	96	62.881	ENSFHEG00000006371	-	89	73.333	Fundulus_heteroclitus
ENSBTAG00000002612	FANCM	94	61.254	ENSGMOG00000002019	-	75	58.354	Gadus_morhua
ENSBTAG00000002612	FANCM	72	75.093	ENSGALG00000031182	FANCM	99	44.133	Gallus_gallus
ENSBTAG00000002612	FANCM	73	67.153	ENSGAFG00000002104	-	99	67.153	Gambusia_affinis
ENSBTAG00000002612	FANCM	95	60.282	ENSGACG00000009448	-	71	57.572	Gasterosteus_aculeatus
ENSBTAG00000002612	FANCM	95	59.016	ENSGAGG00000007068	-	93	63.836	Gopherus_agassizii
ENSBTAG00000002612	FANCM	95	90.169	ENSGGOG00000008546	FANCM	100	75.231	Gorilla_gorilla
ENSBTAG00000002612	FANCM	98	55.344	ENSHBUG00000007085	-	73	55.505	Haplochromis_burtoni
ENSBTAG00000002612	FANCM	95	87.675	ENSHGLG00000013787	FANCM	100	70.473	Heterocephalus_glaber_female
ENSBTAG00000002612	FANCM	95	87.675	ENSHGLG00100006377	FANCM	100	70.473	Heterocephalus_glaber_male
ENSBTAG00000002612	FANCM	95	62.079	ENSHCOG00000013769	-	97	60.964	Hippocampus_comes
ENSBTAG00000002612	FANCM	95	56.750	ENSIPUG00000014629	fancm	88	56.461	Ictalurus_punctatus
ENSBTAG00000002612	FANCM	95	54.964	ENSKMAG00000009391	-	99	54.722	Kryptolebias_marmoratus
ENSBTAG00000002612	FANCM	94	55.860	ENSLBEG00000004982	-	65	58.495	Labrus_bergylta
ENSBTAG00000002612	FANCM	97	69.146	ENSLACG00000007739	FANCM	91	64.151	Latimeria_chalumnae
ENSBTAG00000002612	FANCM	97	66.027	ENSLOCG00000011318	FANCM	90	60.864	Lepisosteus_oculatus
ENSBTAG00000002612	FANCM	95	89.607	ENSLAFG00000001136	FANCM	100	73.934	Loxodonta_africana
ENSBTAG00000002612	FANCM	95	89.326	ENSMFAG00000000383	FANCM	100	75.376	Macaca_fascicularis
ENSBTAG00000002612	FANCM	95	89.326	ENSMMUG00000016513	FANCM	100	75.328	Macaca_mulatta
ENSBTAG00000002612	FANCM	95	89.326	ENSMNEG00000038659	FANCM	100	75.474	Macaca_nemestrina
ENSBTAG00000002612	FANCM	97	80.050	ENSMLEG00000035743	FANCM	100	79.800	Mandrillus_leucophaeus
ENSBTAG00000002612	FANCM	94	55.882	ENSMAMG00000007087	-	70	56.416	Mastacembelus_armatus
ENSBTAG00000002612	FANCM	98	55.582	ENSMZEG00005004644	-	73	55.505	Maylandia_zebra
ENSBTAG00000002612	FANCM	95	70.506	ENSMAUG00000015450	Fancm	99	61.640	Mesocricetus_auratus
ENSBTAG00000002612	FANCM	95	89.607	ENSMICG00000005811	FANCM	100	75.012	Microcebus_murinus
ENSBTAG00000002612	FANCM	95	81.461	ENSMOCG00000008775	Fancm	99	59.844	Microtus_ochrogaster
ENSBTAG00000002612	FANCM	74	65.217	ENSMMOG00000010215	-	64	59.259	Mola_mola
ENSBTAG00000002612	FANCM	95	75.000	ENSMODG00000007334	FANCM	99	54.123	Monodelphis_domestica
ENSBTAG00000002612	FANCM	94	55.882	ENSMALG00000013187	-	94	55.392	Monopterus_albus
ENSBTAG00000002612	FANCM	95	82.303	MGP_CAROLIEiJ_G0017791	Fancm	99	61.849	Mus_caroli
ENSBTAG00000002612	FANCM	95	81.742	ENSMUSG00000055884	Fancm	98	81.306	Mus_musculus
ENSBTAG00000002612	FANCM	95	74.438	MGP_PahariEiJ_G0029547	Fancm	99	59.874	Mus_pahari
ENSBTAG00000002612	FANCM	95	81.180	MGP_SPRETEiJ_G0018636	Fancm	99	61.676	Mus_spretus
ENSBTAG00000002612	FANCM	95	91.854	ENSMPUG00000004849	FANCM	99	77.463	Mustela_putorius_furo
ENSBTAG00000002612	FANCM	95	86.835	ENSMLUG00000006671	FANCM	100	76.425	Myotis_lucifugus
ENSBTAG00000002612	FANCM	95	80.000	ENSNGAG00000017199	Fancm	99	66.861	Nannospalax_galili
ENSBTAG00000002612	FANCM	72	66.171	ENSNBRG00000024095	-	99	66.171	Neolamprologus_brichardi
ENSBTAG00000002612	FANCM	95	89.607	ENSNLEG00000004432	FANCM	100	75.522	Nomascus_leucogenys
ENSBTAG00000002612	FANCM	94	65.439	ENSMEUG00000004977	-	71	65.894	Notamacropus_eugenii
ENSBTAG00000002612	FANCM	98	62.331	ENSONIG00000003531	-	89	50.286	Oreochromis_niloticus
ENSBTAG00000002612	FANCM	68	81.028	ENSOANG00000013997	FANCM	99	53.010	Ornithorhynchus_anatinus
ENSBTAG00000002612	FANCM	95	90.169	ENSOCUG00000007539	FANCM	100	71.776	Oryctolagus_cuniculus
ENSBTAG00000002612	FANCM	95	56.265	ENSORLG00000014503	-	77	55.006	Oryzias_latipes
ENSBTAG00000002612	FANCM	95	56.511	ENSORLG00020013516	-	73	55.121	Oryzias_latipes_hni
ENSBTAG00000002612	FANCM	95	56.650	ENSORLG00015012100	-	73	55.324	Oryzias_latipes_hsok
ENSBTAG00000002612	FANCM	97	57.568	ENSOMEG00000010717	-	99	56.821	Oryzias_melastigma
ENSBTAG00000002612	FANCM	95	88.483	ENSOGAG00000003015	FANCM	100	71.664	Otolemur_garnettii
ENSBTAG00000002612	FANCM	100	93.346	ENSOARG00000009429	FANCM	100	93.346	Ovis_aries
ENSBTAG00000002612	FANCM	95	89.888	ENSPPAG00000028944	FANCM	100	75.425	Pan_paniscus
ENSBTAG00000002612	FANCM	95	92.135	ENSPPRG00000011952	-	100	91.716	Panthera_pardus
ENSBTAG00000002612	FANCM	95	91.854	ENSPTIG00000018621	-	100	91.568	Panthera_tigris_altaica
ENSBTAG00000002612	FANCM	95	89.326	ENSPTRG00000006307	FANCM	100	75.279	Pan_troglodytes
ENSBTAG00000002612	FANCM	95	89.607	ENSPANG00000023200	FANCM	100	75.376	Papio_anubis
ENSBTAG00000002612	FANCM	95	58.250	ENSPKIG00000000861	-	92	58.396	Paramormyrops_kingsleyae
ENSBTAG00000002612	FANCM	72	67.037	ENSPMGG00000010830	-	99	67.037	Periophthalmus_magnuspinnatus
ENSBTAG00000002612	FANCM	95	85.154	ENSPEMG00000005619	Fancm	99	62.397	Peromyscus_maniculatus_bairdii
ENSBTAG00000002612	FANCM	69	56.522	ENSPMAG00000003340	-	100	56.618	Petromyzon_marinus
ENSBTAG00000002612	FANCM	95	72.131	ENSPCIG00000005354	-	99	73.654	Phascolarctos_cinereus
ENSBTAG00000002612	FANCM	95	60.504	ENSPFOG00000002008	-	99	39.591	Poecilia_formosa
ENSBTAG00000002612	FANCM	95	56.796	ENSPLAG00000014164	-	79	54.506	Poecilia_latipinna
ENSBTAG00000002612	FANCM	95	55.107	ENSPMEG00000010746	-	76	56.567	Poecilia_mexicana
ENSBTAG00000002612	FANCM	95	56.724	ENSPREG00000019849	-	79	56.199	Poecilia_reticulata
ENSBTAG00000002612	FANCM	95	89.607	ENSPPYG00000005781	FANCM	100	77.311	Pongo_abelii
ENSBTAG00000002612	FANCM	95	61.236	ENSPCAG00000011363	-	70	77.246	Procavia_capensis
ENSBTAG00000002612	FANCM	95	75.598	ENSPCOG00000014388	FANCM	99	74.641	Propithecus_coquereli
ENSBTAG00000002612	FANCM	74	95.455	ENSPVAG00000015802	FANCM	71	87.983	Pteropus_vampyrus
ENSBTAG00000002612	FANCM	72	66.171	ENSPNYG00000018775	-	99	66.171	Pundamilia_nyererei
ENSBTAG00000002612	FANCM	95	51.128	ENSPNAG00000013558	-	99	37.352	Pygocentrus_nattereri
ENSBTAG00000002612	FANCM	95	81.461	ENSRNOG00000056721	Fancm	100	69.549	Rattus_norvegicus
ENSBTAG00000002612	FANCM	95	89.045	ENSRBIG00000011451	FANCM	100	75.061	Rhinopithecus_bieti
ENSBTAG00000002612	FANCM	95	88.764	ENSRROG00000028917	FANCM	100	75.474	Rhinopithecus_roxellana
ENSBTAG00000002612	FANCM	60	49.776	YIR002C	-	60	31.062	Saccharomyces_cerevisiae
ENSBTAG00000002612	FANCM	95	89.888	ENSSBOG00000030882	FANCM	100	74.308	Saimiri_boliviensis_boliviensis
ENSBTAG00000002612	FANCM	95	74.932	ENSSHAG00000000507	FANCM	100	54.864	Sarcophilus_harrisii
ENSBTAG00000002612	FANCM	72	66.914	ENSSFOG00015017948	-	99	66.914	Scleropages_formosus
ENSBTAG00000002612	FANCM	94	55.156	ENSSMAG00000019903	-	78	63.665	Scophthalmus_maximus
ENSBTAG00000002612	FANCM	98	61.186	ENSSDUG00000016682	-	98	61.456	Seriola_dumerili
ENSBTAG00000002612	FANCM	94	56.049	ENSSLDG00000003408	-	85	49.770	Seriola_lalandi_dorsalis
ENSBTAG00000002612	FANCM	95	86.517	ENSSARG00000002618	FANCM	82	84.884	Sorex_araneus
ENSBTAG00000002612	FANCM	83	63.898	ENSSPAG00000016930	-	97	56.593	Stegastes_partitus
ENSBTAG00000002612	FANCM	95	90.529	ENSSSCG00000005000	FANCM	99	78.929	Sus_scrofa
ENSBTAG00000002612	FANCM	73	77.289	ENSTGUG00000013226	-	100	68.356	Taeniopygia_guttata
ENSBTAG00000002612	FANCM	94	61.932	ENSTRUG00000009756	-	95	62.519	Takifugu_rubripes
ENSBTAG00000002612	FANCM	95	60.504	ENSTNIG00000017277	-	100	39.368	Tetraodon_nigroviridis
ENSBTAG00000002612	FANCM	95	92.697	ENSTTRG00000006669	FANCM	100	83.673	Tursiops_truncatus
ENSBTAG00000002612	FANCM	95	92.416	ENSUMAG00000007704	-	97	89.896	Ursus_maritimus
ENSBTAG00000002612	FANCM	95	92.135	ENSVPAG00000005763	FANCM	72	91.573	Vicugna_pacos
ENSBTAG00000002612	FANCM	95	89.888	ENSVVUG00000000357	FANCM	100	78.005	Vulpes_vulpes
ENSBTAG00000002612	FANCM	95	68.156	ENSXETG00000003046	fancm	100	68.143	Xenopus_tropicalis
ENSBTAG00000002612	FANCM	84	60.952	ENSXCOG00000004854	-	88	60.952	Xiphophorus_couchianus
ENSBTAG00000002612	FANCM	95	55.742	ENSXMAG00000007702	-	77	55.903	Xiphophorus_maculatus