EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000002708 (Gene tree)
Gene ID: 614148
Gene Symbol: MRPL42
Alias: -
Full Name: Bos taurus mitochondrial ribosomal protein L42 (MRPL42)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 30822 bases
Position: chr5:23269801-23300622
Accession: NM_001037622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000003506	MRP-S32	PF10210.9	1e-40	1	1
ENSBTAP00000067833	MRP-S32	PF10210.9	5.3e-35	1	1
ENSBTAP00000072766	MRP-S32	PF10210.9	9.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000086061	-	620	-	ENSBTAP00000067833	129 (aa)	XP_005206177	UPI000383C642
ENSBTAT00000084050	-	1350	-	ENSBTAP00000072766	128 (aa)	-	UPI0002B3594F
ENSBTAT00000003506	-	767	XM_005206117	ENSBTAP00000003506	142 (aa)	XP_005206174	P82927

Gene Model

Click here to download ENSBTAG00000002708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000002708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000002708	MRPL42	75	76.415	ENSBTAG00000052971	-	97	76.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000002708	MRPL42	100	88.281	ENSG00000198015	MRPL42	100	88.281	Homo_sapiens
ENSBTAG00000002708	MRPL42	82	92.381	ENSAMEG00000009832	MRPL42	83	92.381	Ailuropoda_melanoleuca
ENSBTAG00000002708	MRPL42	68	64.583	ENSACIG00000017826	mrpl42	69	64.583	Amphilophus_citrinellus
ENSBTAG00000002708	MRPL42	97	65.468	ENSAPLG00000015057	MRPL42	97	65.468	Anas_platyrhynchos
ENSBTAG00000002708	MRPL42	100	84.375	ENSANAG00000036935	-	100	81.690	Aotus_nancymaae
ENSBTAG00000002708	MRPL42	99	79.528	ENSANAG00000033101	-	84	79.528	Aotus_nancymaae
ENSBTAG00000002708	MRPL42	100	79.688	ENSANAG00000000692	-	91	80.315	Aotus_nancymaae
ENSBTAG00000002708	MRPL42	100	63.380	ENSANAG00000036083	-	85	79.208	Aotus_nancymaae
ENSBTAG00000002708	MRPL42	100	85.938	ENSCJAG00000046971	MRPL42	100	84.507	Callithrix_jacchus
ENSBTAG00000002708	MRPL42	60	75.000	ENSCAFG00000030257	-	93	75.000	Canis_familiaris
ENSBTAG00000002708	MRPL42	68	93.814	ENSCAFG00020022967	-	85	93.814	Canis_lupus_dingo
ENSBTAG00000002708	MRPL42	57	86.301	ENSCAFG00020016271	-	97	86.301	Canis_lupus_dingo
ENSBTAG00000002708	MRPL42	100	96.875	ENSCHIG00000014921	MRPL42	100	96.875	Capra_hircus
ENSBTAG00000002708	MRPL42	100	88.732	ENSTSYG00000006370	-	100	88.732	Carlito_syrichta
ENSBTAG00000002708	MRPL42	77	83.486	ENSTSYG00000032810	-	100	83.486	Carlito_syrichta
ENSBTAG00000002708	MRPL42	100	82.812	ENSTSYG00000036466	-	90	81.679	Carlito_syrichta
ENSBTAG00000002708	MRPL42	92	80.597	ENSCAPG00000016985	-	100	80.597	Cavia_aperea
ENSBTAG00000002708	MRPL42	100	69.014	ENSCAPG00000015105	-	100	69.014	Cavia_aperea
ENSBTAG00000002708	MRPL42	96	85.294	ENSCPOG00000030015	-	98	84.397	Cavia_porcellus
ENSBTAG00000002708	MRPL42	100	69.718	ENSCPOG00000008943	-	100	69.718	Cavia_porcellus
ENSBTAG00000002708	MRPL42	100	85.938	ENSCCAG00000031179	-	100	84.507	Cebus_capucinus
ENSBTAG00000002708	MRPL42	99	81.102	ENSCCAG00000032203	-	77	81.102	Cebus_capucinus
ENSBTAG00000002708	MRPL42	100	66.406	ENSCCAG00000029290	-	83	66.406	Cebus_capucinus
ENSBTAG00000002708	MRPL42	100	87.500	ENSCATG00000037616	MRPL42	100	87.324	Cercocebus_atys
ENSBTAG00000002708	MRPL42	100	85.211	ENSCLAG00000005421	MRPL42	100	85.211	Chinchilla_lanigera
ENSBTAG00000002708	MRPL42	100	86.719	ENSCSAG00000003706	MRPL42	100	85.915	Chlorocebus_sabaeus
ENSBTAG00000002708	MRPL42	83	49.153	ENSCHOG00000007010	-	100	49.153	Choloepus_hoffmanni
ENSBTAG00000002708	MRPL42	100	67.568	ENSCPBG00000001581	MRPL42	100	67.568	Chrysemys_picta_bellii
ENSBTAG00000002708	MRPL42	100	87.500	ENSCANG00000033457	MRPL42	100	87.324	Colobus_angolensis_palliatus
ENSBTAG00000002708	MRPL42	100	76.761	ENSCGRG00001012694	-	99	76.761	Cricetulus_griseus_chok1gshd
ENSBTAG00000002708	MRPL42	98	64.029	ENSCGRG00001003813	-	98	64.029	Cricetulus_griseus_chok1gshd
ENSBTAG00000002708	MRPL42	98	78.417	ENSCGRG00000003801	Mrpl42	99	78.417	Cricetulus_griseus_crigri
ENSBTAG00000002708	MRPL42	100	84.375	ENSDNOG00000049701	-	100	78.169	Dasypus_novemcinctus
ENSBTAG00000002708	MRPL42	100	84.375	ENSDNOG00000032710	-	100	83.803	Dasypus_novemcinctus
ENSBTAG00000002708	MRPL42	98	85.612	ENSDORG00000015571	Mrpl42	99	85.612	Dipodomys_ordii
ENSBTAG00000002708	MRPL42	87	59.677	ENSETEG00000014745	-	92	59.677	Echinops_telfairi
ENSBTAG00000002708	MRPL42	100	94.531	ENSEASG00005019361	MRPL42	100	93.662	Equus_asinus_asinus
ENSBTAG00000002708	MRPL42	100	94.531	ENSECAG00000026888	MRPL42	100	93.662	Equus_caballus
ENSBTAG00000002708	MRPL42	87	85.484	ENSFCAG00000040567	-	100	85.484	Felis_catus
ENSBTAG00000002708	MRPL42	100	88.732	ENSFCAG00000037907	-	100	88.732	Felis_catus
ENSBTAG00000002708	MRPL42	99	69.531	ENSFCAG00000036356	-	80	69.531	Felis_catus
ENSBTAG00000002708	MRPL42	94	65.517	ENSFALG00000010717	MRPL42	99	65.517	Ficedula_albicollis
ENSBTAG00000002708	MRPL42	98	83.453	ENSFDAG00000018129	MRPL42	99	83.453	Fukomys_damarensis
ENSBTAG00000002708	MRPL42	87	69.106	ENSGALG00000011293	MRPL42	84	69.106	Gallus_gallus
ENSBTAG00000002708	MRPL42	100	68.243	ENSGAGG00000010125	MRPL42	100	68.243	Gopherus_agassizii
ENSBTAG00000002708	MRPL42	100	88.281	ENSGGOG00000022760	MRPL42	100	87.324	Gorilla_gorilla
ENSBTAG00000002708	MRPL42	95	87.705	ENSHGLG00000007399	-	93	87.302	Heterocephalus_glaber_female
ENSBTAG00000002708	MRPL42	96	84.553	ENSHGLG00000008248	-	100	84.553	Heterocephalus_glaber_female
ENSBTAG00000002708	MRPL42	97	87.903	ENSHGLG00100018317	-	87	87.903	Heterocephalus_glaber_male
ENSBTAG00000002708	MRPL42	95	84.298	ENSHGLG00100013257	-	98	84.298	Heterocephalus_glaber_male
ENSBTAG00000002708	MRPL42	100	81.250	ENSSTOG00000026544	MRPL42	100	80.986	Ictidomys_tridecemlineatus
ENSBTAG00000002708	MRPL42	87	66.667	ENSLACG00000006919	MRPL42	84	66.667	Latimeria_chalumnae
ENSBTAG00000002708	MRPL42	84	87.395	ENSLAFG00000013779	MRPL42	85	87.395	Loxodonta_africana
ENSBTAG00000002708	MRPL42	100	86.719	ENSMFAG00000032330	MRPL42	100	86.620	Macaca_fascicularis
ENSBTAG00000002708	MRPL42	100	86.719	ENSMMUG00000016805	MRPL42	100	84.507	Macaca_mulatta
ENSBTAG00000002708	MRPL42	100	86.719	ENSMNEG00000028853	MRPL42	100	86.620	Macaca_nemestrina
ENSBTAG00000002708	MRPL42	100	87.500	ENSMLEG00000038104	MRPL42	100	87.324	Mandrillus_leucophaeus
ENSBTAG00000002708	MRPL42	87	69.106	ENSMGAG00000011346	MRPL42	84	69.106	Meleagris_gallopavo
ENSBTAG00000002708	MRPL42	98	73.381	ENSMAUG00000010057	-	99	73.381	Mesocricetus_auratus
ENSBTAG00000002708	MRPL42	98	64.029	ENSMAUG00000018130	-	98	64.029	Mesocricetus_auratus
ENSBTAG00000002708	MRPL42	100	88.281	ENSMICG00000032596	-	100	88.028	Microcebus_murinus
ENSBTAG00000002708	MRPL42	98	88.000	ENSMICG00000036541	-	99	86.792	Microcebus_murinus
ENSBTAG00000002708	MRPL42	100	88.281	ENSMICG00000035189	-	92	87.879	Microcebus_murinus
ENSBTAG00000002708	MRPL42	68	87.500	ENSMICG00000028094	-	89	87.500	Microcebus_murinus
ENSBTAG00000002708	MRPL42	68	87.500	ENSMICG00000045594	-	97	87.500	Microcebus_murinus
ENSBTAG00000002708	MRPL42	98	74.820	ENSMOCG00000004616	-	99	74.820	Microtus_ochrogaster
ENSBTAG00000002708	MRPL42	98	80.000	ENSMOCG00000013541	-	99	79.856	Microtus_ochrogaster
ENSBTAG00000002708	MRPL42	98	77.143	MGP_CAROLIEiJ_G0015750	Mrpl42	99	77.143	Mus_caroli
ENSBTAG00000002708	MRPL42	98	77.143	ENSMUSG00000062981	Mrpl42	99	77.143	Mus_musculus
ENSBTAG00000002708	MRPL42	100	85.156	ENSMLUG00000025058	-	99	85.000	Myotis_lucifugus
ENSBTAG00000002708	MRPL42	100	82.812	ENSMLUG00000023702	-	100	82.394	Myotis_lucifugus
ENSBTAG00000002708	MRPL42	100	83.803	ENSMLUG00000029623	-	100	83.803	Myotis_lucifugus
ENSBTAG00000002708	MRPL42	100	85.156	ENSNGAG00000000717	Mrpl42	100	85.156	Nannospalax_galili
ENSBTAG00000002708	MRPL42	100	88.281	ENSNLEG00000005699	MRPL42	100	87.324	Nomascus_leucogenys
ENSBTAG00000002708	MRPL42	83	43.220	ENSMEUG00000008043	-	100	43.220	Notamacropus_eugenii
ENSBTAG00000002708	MRPL42	100	78.873	ENSOPRG00000010967	MRPL42	100	78.873	Ochotona_princeps
ENSBTAG00000002708	MRPL42	99	76.056	ENSODEG00000016452	-	99	77.465	Octodon_degus
ENSBTAG00000002708	MRPL42	83	88.235	ENSODEG00000008681	-	100	88.235	Octodon_degus
ENSBTAG00000002708	MRPL42	100	78.322	ENSODEG00000012689	-	100	79.720	Octodon_degus
ENSBTAG00000002708	MRPL42	100	89.844	ENSOCUG00000010928	MRPL42	100	84.507	Oryctolagus_cuniculus
ENSBTAG00000002708	MRPL42	100	80.469	ENSOGAG00000026395	-	100	79.577	Otolemur_garnettii
ENSBTAG00000002708	MRPL42	100	80.469	ENSOGAG00000034004	-	100	80.282	Otolemur_garnettii
ENSBTAG00000002708	MRPL42	100	87.500	ENSOGAG00000025600	-	100	87.324	Otolemur_garnettii
ENSBTAG00000002708	MRPL42	100	82.031	ENSOGAG00000027617	-	100	80.986	Otolemur_garnettii
ENSBTAG00000002708	MRPL42	98	80.000	ENSOGAG00000030438	-	99	79.137	Otolemur_garnettii
ENSBTAG00000002708	MRPL42	100	85.938	ENSOGAG00000025686	-	100	85.915	Otolemur_garnettii
ENSBTAG00000002708	MRPL42	100	78.906	ENSOGAG00000024156	-	100	78.169	Otolemur_garnettii
ENSBTAG00000002708	MRPL42	100	97.656	ENSOARG00000015849	MRPL42	100	97.656	Ovis_aries
ENSBTAG00000002708	MRPL42	100	86.719	ENSPPAG00000038254	MRPL42	100	85.915	Pan_paniscus
ENSBTAG00000002708	MRPL42	87	85.484	ENSPPRG00000017935	-	100	85.484	Panthera_pardus
ENSBTAG00000002708	MRPL42	99	68.750	ENSPPRG00000006533	-	80	68.750	Panthera_pardus
ENSBTAG00000002708	MRPL42	100	87.324	ENSPPRG00000015755	-	100	87.324	Panthera_pardus
ENSBTAG00000002708	MRPL42	100	88.732	ENSPPRG00000013218	-	100	88.732	Panthera_pardus
ENSBTAG00000002708	MRPL42	82	84.615	ENSPTIG00000009717	-	95	84.615	Panthera_tigris_altaica
ENSBTAG00000002708	MRPL42	100	87.500	ENSPTIG00000009394	-	100	87.324	Panthera_tigris_altaica
ENSBTAG00000002708	MRPL42	100	88.732	ENSPTIG00000019099	-	100	88.732	Panthera_tigris_altaica
ENSBTAG00000002708	MRPL42	100	86.719	ENSPTRG00000022791	MRPL42	100	85.915	Pan_troglodytes
ENSBTAG00000002708	MRPL42	100	76.744	ENSPANG00000030179	MRPL42	100	76.190	Papio_anubis
ENSBTAG00000002708	MRPL42	100	64.865	ENSPSIG00000010745	MRPL42	100	64.865	Pelodiscus_sinensis
ENSBTAG00000002708	MRPL42	98	79.200	ENSPEMG00000020562	-	99	79.137	Peromyscus_maniculatus_bairdii
ENSBTAG00000002708	MRPL42	100	66.892	ENSPCIG00000001472	-	77	66.892	Phascolarctos_cinereus
ENSBTAG00000002708	MRPL42	100	87.500	ENSPPYG00000004833	MRPL42	100	86.620	Pongo_abelii
ENSBTAG00000002708	MRPL42	83	86.441	ENSPCAG00000003791	MRPL42	100	86.441	Procavia_capensis
ENSBTAG00000002708	MRPL42	100	66.901	ENSPCOG00000018896	-	100	66.901	Propithecus_coquereli
ENSBTAG00000002708	MRPL42	99	88.281	ENSPCOG00000014986	-	98	83.824	Propithecus_coquereli
ENSBTAG00000002708	MRPL42	98	80.159	ENSPCOG00000025008	-	100	76.761	Propithecus_coquereli
ENSBTAG00000002708	MRPL42	64	69.512	ENSPVAG00000013736	-	69	69.512	Pteropus_vampyrus
ENSBTAG00000002708	MRPL42	98	73.571	ENSRNOG00000021867	AABR07009508.1	98	73.571	Rattus_norvegicus
ENSBTAG00000002708	MRPL42	98	78.417	ENSRNOG00000042740	Mrpl42	99	78.417	Rattus_norvegicus
ENSBTAG00000002708	MRPL42	100	85.211	ENSRBIG00000011046	-	100	85.211	Rhinopithecus_bieti
ENSBTAG00000002708	MRPL42	100	67.188	ENSRBIG00000044361	-	79	67.188	Rhinopithecus_bieti
ENSBTAG00000002708	MRPL42	100	87.500	ENSRROG00000033949	MRPL42	100	87.324	Rhinopithecus_roxellana
ENSBTAG00000002708	MRPL42	100	81.250	ENSSBOG00000009656	-	100	80.282	Saimiri_boliviensis_boliviensis
ENSBTAG00000002708	MRPL42	66	80.851	ENSSBOG00000027483	-	82	80.851	Saimiri_boliviensis_boliviensis
ENSBTAG00000002708	MRPL42	83	63.559	ENSSBOG00000025086	-	100	63.559	Saimiri_boliviensis_boliviensis
ENSBTAG00000002708	MRPL42	84	62.500	ENSSFOG00015006975	mrpl42	82	62.500	Scleropages_formosus
ENSBTAG00000002708	MRPL42	90	66.406	ENSSPUG00000015009	-	86	66.406	Sphenodon_punctatus
ENSBTAG00000002708	MRPL42	77	63.636	ENSSPAG00000013637	mrpl42	76	63.636	Stegastes_partitus
ENSBTAG00000002708	MRPL42	100	92.254	ENSSSCG00000030478	-	100	92.254	Sus_scrofa
ENSBTAG00000002708	MRPL42	95	71.074	ENSSSCG00000036897	-	99	65.957	Sus_scrofa
ENSBTAG00000002708	MRPL42	82	63.934	ENSSSCG00000035613	-	100	63.934	Sus_scrofa
ENSBTAG00000002708	MRPL42	70	59.596	ENSSSCG00000034693	-	84	59.596	Sus_scrofa
ENSBTAG00000002708	MRPL42	83	73.729	ENSTGUG00000008272	MRPL42	100	73.729	Taeniopygia_guttata
ENSBTAG00000002708	MRPL42	69	57.955	ENSTNIG00000018478	mrpl42	67	57.955	Tetraodon_nigroviridis
ENSBTAG00000002708	MRPL42	87	91.870	ENSTTRG00000003312	MRPL42	92	91.870	Tursiops_truncatus
ENSBTAG00000002708	MRPL42	100	92.254	ENSUAMG00000025405	-	100	92.254	Ursus_americanus
ENSBTAG00000002708	MRPL42	63	74.074	ENSUAMG00000019831	-	96	68.085	Ursus_americanus
ENSBTAG00000002708	MRPL42	90	75.000	ENSUMAG00000014643	-	77	73.984	Ursus_maritimus
ENSBTAG00000002708	MRPL42	100	92.254	ENSUMAG00000003107	-	100	92.254	Ursus_maritimus
ENSBTAG00000002708	MRPL42	83	91.525	ENSVPAG00000007658	MRPL42	100	91.525	Vicugna_pacos
ENSBTAG00000002708	MRPL42	59	86.667	ENSVVUG00000007253	-	96	86.667	Vulpes_vulpes
ENSBTAG00000002708	MRPL42	59	85.526	ENSVVUG00000002834	-	94	85.526	Vulpes_vulpes
ENSBTAG00000002708	MRPL42	100	89.437	ENSVVUG00000011842	-	100	89.437	Vulpes_vulpes
ENSBTAG00000002708	MRPL42	86	51.818	ENSXMAG00000004057	mrpl42	85	50.806	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005743	mitochondrial inner membrane	-	TAS	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISS	Component
GO:0005763	mitochondrial small ribosomal subunit	-	IEA	Component
GO:0005886	plasma membrane	-	IEA	Component