EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000002778 (Gene tree)
Gene ID: 531931
Gene Symbol: SF3B2
Alias: -
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 14474 bases
Position: chr29:44136952-44151425
Accession: 34510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000003602	DUF382	PF04037.13	1.5e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000003602	-	3742	-	ENSBTAP00000003602	896 (aa)	-	F1MC31

Gene Model

Click here to download ENSBTAG00000002778's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000002778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000002778	SF3B2	100	97.108	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
ENSBTAG00000002778	SF3B2	83	74.271	ENSAPOG00000001974	sf3b2	82	75.101	Acanthochromis_polyacanthus
ENSBTAG00000002778	SF3B2	100	98.885	ENSAMEG00000017206	SF3B2	100	98.885	Ailuropoda_melanoleuca
ENSBTAG00000002778	SF3B2	85	72.144	ENSACIG00000000624	sf3b2	87	73.732	Amphilophus_citrinellus
ENSBTAG00000002778	SF3B2	97	67.517	ENSAOCG00000009207	sf3b2	86	75.489	Amphiprion_ocellaris
ENSBTAG00000002778	SF3B2	97	66.480	ENSAPEG00000002762	sf3b2	84	75.750	Amphiprion_percula
ENSBTAG00000002778	SF3B2	100	66.630	ENSACAG00000008615	SF3B2	100	67.069	Anolis_carolinensis
ENSBTAG00000002778	SF3B2	100	97.000	ENSANAG00000029120	SF3B2	100	97.000	Aotus_nancymaae
ENSBTAG00000002778	SF3B2	85	73.834	ENSACLG00000014771	sf3b2	87	75.131	Astatotilapia_calliptera
ENSBTAG00000002778	SF3B2	84	72.338	ENSAMXG00000007929	sf3b2	86	77.273	Astyanax_mexicanus
ENSBTAG00000002778	SF3B2	59	51.060	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSBTAG00000002778	SF3B2	100	97.111	ENSCJAG00000001656	SF3B2	100	97.111	Callithrix_jacchus
ENSBTAG00000002778	SF3B2	100	98.772	ENSCAFG00000013033	SF3B2	100	98.772	Canis_familiaris
ENSBTAG00000002778	SF3B2	100	98.772	ENSCAFG00020015382	SF3B2	100	98.772	Canis_lupus_dingo
ENSBTAG00000002778	SF3B2	100	99.665	ENSCHIG00000011211	SF3B2	100	99.665	Capra_hircus
ENSBTAG00000002778	SF3B2	100	96.997	ENSTSYG00000000959	SF3B2	100	96.997	Carlito_syrichta
ENSBTAG00000002778	SF3B2	62	80.870	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSBTAG00000002778	SF3B2	91	94.247	ENSCPOG00000008294	SF3B2	100	94.247	Cavia_porcellus
ENSBTAG00000002778	SF3B2	100	97.111	ENSCCAG00000035256	SF3B2	100	97.111	Cebus_capucinus
ENSBTAG00000002778	SF3B2	100	97.219	ENSCATG00000042240	SF3B2	100	97.219	Cercocebus_atys
ENSBTAG00000002778	SF3B2	100	95.662	ENSCLAG00000016852	SF3B2	100	95.662	Chinchilla_lanigera
ENSBTAG00000002778	SF3B2	100	97.219	ENSCSAG00000008121	SF3B2	100	97.219	Chlorocebus_sabaeus
ENSBTAG00000002778	SF3B2	91	99.485	ENSCHOG00000001476	SF3B2	92	91.237	Choloepus_hoffmanni
ENSBTAG00000002778	SF3B2	100	74.015	ENSCPBG00000022465	SF3B2	87	88.558	Chrysemys_picta_bellii
ENSBTAG00000002778	SF3B2	72	59.293	ENSCING00000005665	-	99	59.906	Ciona_intestinalis
ENSBTAG00000002778	SF3B2	70	60.031	ENSCSAVG00000002029	-	99	59.248	Ciona_savignyi
ENSBTAG00000002778	SF3B2	100	97.219	ENSCANG00000039680	SF3B2	100	97.219	Colobus_angolensis_palliatus
ENSBTAG00000002778	SF3B2	100	96.107	ENSCGRG00001015741	Sf3b2	100	96.107	Cricetulus_griseus_chok1gshd
ENSBTAG00000002778	SF3B2	100	96.107	ENSCGRG00000018110	Sf3b2	100	96.107	Cricetulus_griseus_crigri
ENSBTAG00000002778	SF3B2	74	75.150	ENSCSEG00000000230	sf3b2	78	77.760	Cynoglossus_semilaevis
ENSBTAG00000002778	SF3B2	84	71.654	ENSCVAG00000003357	sf3b2	85	73.403	Cyprinodon_variegatus
ENSBTAG00000002778	SF3B2	79	74.412	ENSDARG00000018049	sf3b2	86	73.077	Danio_rerio
ENSBTAG00000002778	SF3B2	100	96.429	ENSDNOG00000009484	SF3B2	100	96.429	Dasypus_novemcinctus
ENSBTAG00000002778	SF3B2	100	95.444	ENSDORG00000002495	Sf3b2	100	95.444	Dipodomys_ordii
ENSBTAG00000002778	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
ENSBTAG00000002778	SF3B2	98	58.919	ENSEBUG00000013703	sf3b2	99	60.196	Eptatretus_burgeri
ENSBTAG00000002778	SF3B2	100	98.328	ENSEASG00005004508	SF3B2	100	98.328	Equus_asinus_asinus
ENSBTAG00000002778	SF3B2	100	98.328	ENSECAG00000024461	SF3B2	100	98.328	Equus_caballus
ENSBTAG00000002778	SF3B2	60	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSBTAG00000002778	SF3B2	97	66.775	ENSELUG00000005586	sf3b2	86	72.050	Esox_lucius
ENSBTAG00000002778	SF3B2	100	98.884	ENSFCAG00000013289	SF3B2	100	98.884	Felis_catus
ENSBTAG00000002778	SF3B2	78	71.023	ENSFALG00000014653	SF3B2	98	68.927	Ficedula_albicollis
ENSBTAG00000002778	SF3B2	100	96.903	ENSFDAG00000019806	SF3B2	100	96.903	Fukomys_damarensis
ENSBTAG00000002778	SF3B2	84	70.337	ENSFHEG00000020968	sf3b2	86	72.244	Fundulus_heteroclitus
ENSBTAG00000002778	SF3B2	72	78.168	ENSGMOG00000012131	sf3b2	96	81.102	Gadus_morhua
ENSBTAG00000002778	SF3B2	97	67.263	ENSGAFG00000001675	sf3b2	86	71.189	Gambusia_affinis
ENSBTAG00000002778	SF3B2	72	79.385	ENSGACG00000019012	sf3b2	96	80.442	Gasterosteus_aculeatus
ENSBTAG00000002778	SF3B2	100	80.842	ENSGAGG00000023916	SF3B2	86	84.231	Gopherus_agassizii
ENSBTAG00000002778	SF3B2	100	97.108	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
ENSBTAG00000002778	SF3B2	85	73.834	ENSHBUG00000017349	sf3b2	87	75.000	Haplochromis_burtoni
ENSBTAG00000002778	SF3B2	100	95.551	ENSHGLG00000010807	SF3B2	100	95.551	Heterocephalus_glaber_female
ENSBTAG00000002778	SF3B2	100	97.442	ENSHGLG00100006361	SF3B2	100	97.442	Heterocephalus_glaber_male
ENSBTAG00000002778	SF3B2	97	66.667	ENSHCOG00000016203	sf3b2	97	66.251	Hippocampus_comes
ENSBTAG00000002778	SF3B2	80	72.260	ENSIPUG00000009383	sf3b2	85	72.691	Ictalurus_punctatus
ENSBTAG00000002778	SF3B2	100	97.887	ENSSTOG00000028892	SF3B2	100	97.887	Ictidomys_tridecemlineatus
ENSBTAG00000002778	SF3B2	100	95.898	ENSJJAG00000018193	Sf3b2	100	95.898	Jaculus_jaculus
ENSBTAG00000002778	SF3B2	59	88.158	ENSKMAG00000020181	sf3b2	84	74.011	Kryptolebias_marmoratus
ENSBTAG00000002778	SF3B2	97	68.722	ENSLBEG00000027739	sf3b2	88	78.898	Labrus_bergylta
ENSBTAG00000002778	SF3B2	71	80.564	ENSLACG00000010429	SF3B2	86	74.131	Latimeria_chalumnae
ENSBTAG00000002778	SF3B2	100	95.759	ENSLAFG00000002128	SF3B2	100	95.759	Loxodonta_africana
ENSBTAG00000002778	SF3B2	100	97.111	ENSMFAG00000003064	SF3B2	100	97.111	Macaca_fascicularis
ENSBTAG00000002778	SF3B2	100	93.415	ENSMMUG00000011743	SF3B2	100	93.415	Macaca_mulatta
ENSBTAG00000002778	SF3B2	100	97.108	ENSMNEG00000034437	SF3B2	100	97.108	Macaca_nemestrina
ENSBTAG00000002778	SF3B2	100	97.219	ENSMLEG00000029373	SF3B2	100	97.219	Mandrillus_leucophaeus
ENSBTAG00000002778	SF3B2	84	74.774	ENSMAMG00000014103	sf3b2	86	76.104	Mastacembelus_armatus
ENSBTAG00000002778	SF3B2	85	73.834	ENSMZEG00005020789	sf3b2	86	75.131	Maylandia_zebra
ENSBTAG00000002778	SF3B2	65	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSBTAG00000002778	SF3B2	100	96.663	ENSMICG00000008565	-	100	96.663	Microcebus_murinus
ENSBTAG00000002778	SF3B2	100	93.318	ENSMICG00000016942	-	83	94.993	Microcebus_murinus
ENSBTAG00000002778	SF3B2	100	95.773	ENSMOCG00000003136	Sf3b2	100	95.773	Microtus_ochrogaster
ENSBTAG00000002778	SF3B2	97	66.327	ENSMMOG00000012928	sf3b2	86	72.178	Mola_mola
ENSBTAG00000002778	SF3B2	86	91.784	ENSMODG00000008490	-	92	92.126	Monodelphis_domestica
ENSBTAG00000002778	SF3B2	71	88.031	ENSMODG00000025020	-	99	87.087	Monodelphis_domestica
ENSBTAG00000002778	SF3B2	80	72.169	ENSMALG00000015137	sf3b2	84	73.461	Monopterus_albus
ENSBTAG00000002778	SF3B2	100	95.106	MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.106	Mus_caroli
ENSBTAG00000002778	SF3B2	100	95.773	ENSMUSG00000024853	Sf3b2	100	95.773	Mus_musculus
ENSBTAG00000002778	SF3B2	100	95.551	MGP_PahariEiJ_G0014036	Sf3b2	100	95.551	Mus_pahari
ENSBTAG00000002778	SF3B2	100	95.662	MGP_SPRETEiJ_G0023453	Sf3b2	100	95.662	Mus_spretus
ENSBTAG00000002778	SF3B2	100	98.661	ENSMPUG00000011349	SF3B2	100	98.661	Mustela_putorius_furo
ENSBTAG00000002778	SF3B2	100	97.768	ENSMLUG00000011136	SF3B2	100	97.768	Myotis_lucifugus
ENSBTAG00000002778	SF3B2	100	95.884	ENSNGAG00000012103	Sf3b2	100	95.884	Nannospalax_galili
ENSBTAG00000002778	SF3B2	84	93.864	ENSNLEG00000006007	SF3B2	100	90.132	Nomascus_leucogenys
ENSBTAG00000002778	SF3B2	86	93.466	ENSMEUG00000000019	SF3B2	91	93.466	Notamacropus_eugenii
ENSBTAG00000002778	SF3B2	100	91.769	ENSODEG00000017764	SF3B2	100	91.769	Octodon_degus
ENSBTAG00000002778	SF3B2	97	67.531	ENSONIG00000013068	sf3b2	87	74.289	Oreochromis_niloticus
ENSBTAG00000002778	SF3B2	87	80.662	ENSOANG00000012482	SF3B2	97	79.739	Ornithorhynchus_anatinus
ENSBTAG00000002778	SF3B2	100	91.991	ENSOCUG00000015722	-	100	91.991	Oryctolagus_cuniculus
ENSBTAG00000002778	SF3B2	62	63.243	ENSOCUG00000024154	-	95	66.406	Oryctolagus_cuniculus
ENSBTAG00000002778	SF3B2	97	68.109	ENSORLG00000008235	sf3b2	85	74.770	Oryzias_latipes
ENSBTAG00000002778	SF3B2	97	68.109	ENSORLG00020005357	sf3b2	88	74.770	Oryzias_latipes_hni
ENSBTAG00000002778	SF3B2	97	68.223	ENSORLG00015022454	sf3b2	82	77.638	Oryzias_latipes_hsok
ENSBTAG00000002778	SF3B2	86	71.410	ENSOMEG00000017480	sf3b2	88	74.376	Oryzias_melastigma
ENSBTAG00000002778	SF3B2	100	90.990	ENSOGAG00000005799	SF3B2	100	91.546	Otolemur_garnettii
ENSBTAG00000002778	SF3B2	100	93.341	ENSOARG00000002125	SF3B2	100	99.864	Ovis_aries
ENSBTAG00000002778	SF3B2	100	97.108	ENSPPAG00000007359	SF3B2	100	97.108	Pan_paniscus
ENSBTAG00000002778	SF3B2	100	98.884	ENSPPRG00000013334	SF3B2	100	98.884	Panthera_pardus
ENSBTAG00000002778	SF3B2	100	98.772	ENSPTIG00000015022	SF3B2	100	98.772	Panthera_tigris_altaica
ENSBTAG00000002778	SF3B2	100	97.108	ENSPTRG00000003912	SF3B2	100	97.108	Pan_troglodytes
ENSBTAG00000002778	SF3B2	100	97.219	ENSPANG00000008593	SF3B2	100	97.219	Papio_anubis
ENSBTAG00000002778	SF3B2	97	68.161	ENSPKIG00000016576	sf3b2	86	79.905	Paramormyrops_kingsleyae
ENSBTAG00000002778	SF3B2	93	82.681	ENSPSIG00000003158	SF3B2	100	88.655	Pelodiscus_sinensis
ENSBTAG00000002778	SF3B2	84	68.816	ENSPMGG00000000819	sf3b2	86	68.947	Periophthalmus_magnuspinnatus
ENSBTAG00000002778	SF3B2	100	95.884	ENSPEMG00000015437	Sf3b2	100	95.884	Peromyscus_maniculatus_bairdii
ENSBTAG00000002778	SF3B2	93	80.958	ENSPEMG00000015451	-	91	82.523	Peromyscus_maniculatus_bairdii
ENSBTAG00000002778	SF3B2	100	89.670	ENSPCIG00000008381	SF3B2	100	89.780	Phascolarctos_cinereus
ENSBTAG00000002778	SF3B2	97	66.374	ENSPFOG00000002552	sf3b2	86	72.716	Poecilia_formosa
ENSBTAG00000002778	SF3B2	97	66.484	ENSPLAG00000001471	sf3b2	86	72.844	Poecilia_latipinna
ENSBTAG00000002778	SF3B2	97	64.945	ENSPMEG00000013180	sf3b2	86	71.355	Poecilia_mexicana
ENSBTAG00000002778	SF3B2	84	71.299	ENSPREG00000002665	sf3b2	86	72.481	Poecilia_reticulata
ENSBTAG00000002778	SF3B2	75	94.667	ENSPPYG00000003034	-	99	94.667	Pongo_abelii
ENSBTAG00000002778	SF3B2	100	96.875	ENSPCAG00000005129	SF3B2	100	96.875	Procavia_capensis
ENSBTAG00000002778	SF3B2	100	96.997	ENSPCOG00000025375	SF3B2	100	96.997	Propithecus_coquereli
ENSBTAG00000002778	SF3B2	55	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSBTAG00000002778	SF3B2	60	99.561	ENSPVAG00000005466	-	88	99.561	Pteropus_vampyrus
ENSBTAG00000002778	SF3B2	79	74.064	ENSPNYG00000023594	sf3b2	92	74.792	Pundamilia_nyererei
ENSBTAG00000002778	SF3B2	86	72.173	ENSPNAG00000001891	sf3b2	86	73.969	Pygocentrus_nattereri
ENSBTAG00000002778	SF3B2	100	95.662	ENSRNOG00000020412	Sf3b2	100	95.662	Rattus_norvegicus
ENSBTAG00000002778	SF3B2	100	97.108	ENSRBIG00000034065	SF3B2	100	97.108	Rhinopithecus_bieti
ENSBTAG00000002778	SF3B2	100	97.108	ENSRROG00000034496	SF3B2	100	97.108	Rhinopithecus_roxellana
ENSBTAG00000002778	SF3B2	100	92.308	ENSSBOG00000026337	SF3B2	87	94.812	Saimiri_boliviensis_boliviensis
ENSBTAG00000002778	SF3B2	100	84.701	ENSSHAG00000010933	-	100	84.812	Sarcophilus_harrisii
ENSBTAG00000002778	SF3B2	96	68.650	ENSSHAG00000018043	-	89	72.692	Sarcophilus_harrisii
ENSBTAG00000002778	SF3B2	97	68.212	ENSSFOG00015021125	sf3b2	86	75.032	Scleropages_formosus
ENSBTAG00000002778	SF3B2	84	75.098	ENSSMAG00000004079	sf3b2	88	75.000	Scophthalmus_maximus
ENSBTAG00000002778	SF3B2	59	88.425	ENSSDUG00000008499	sf3b2	85	71.891	Seriola_dumerili
ENSBTAG00000002778	SF3B2	59	88.425	ENSSLDG00000006838	sf3b2	86	75.353	Seriola_lalandi_dorsalis
ENSBTAG00000002778	SF3B2	68	99.206	ENSSARG00000003707	-	68	99.206	Sorex_araneus
ENSBTAG00000002778	SF3B2	100	79.911	ENSSPUG00000009198	SF3B2	85	83.858	Sphenodon_punctatus
ENSBTAG00000002778	SF3B2	97	65.255	ENSSPAG00000004406	sf3b2	86	74.936	Stegastes_partitus
ENSBTAG00000002778	SF3B2	100	98.214	ENSSSCG00000012957	SF3B2	100	98.214	Sus_scrofa
ENSBTAG00000002778	SF3B2	86	63.718	ENSTRUG00000007611	sf3b2	88	71.919	Takifugu_rubripes
ENSBTAG00000002778	SF3B2	86	70.513	ENSTNIG00000007441	sf3b2	85	70.929	Tetraodon_nigroviridis
ENSBTAG00000002778	SF3B2	89	95.402	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSBTAG00000002778	SF3B2	100	98.661	ENSTTRG00000014339	SF3B2	100	98.661	Tursiops_truncatus
ENSBTAG00000002778	SF3B2	100	96.878	ENSUAMG00000020754	SF3B2	99	98.286	Ursus_americanus
ENSBTAG00000002778	SF3B2	100	98.884	ENSUMAG00000010994	SF3B2	100	98.884	Ursus_maritimus
ENSBTAG00000002778	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	72	99.153	Vicugna_pacos
ENSBTAG00000002778	SF3B2	100	98.661	ENSVVUG00000027029	SF3B2	100	98.661	Vulpes_vulpes
ENSBTAG00000002778	SF3B2	87	69.444	ENSXETG00000008422	sf3b2	87	78.102	Xenopus_tropicalis
ENSBTAG00000002778	SF3B2	70	78.413	ENSXCOG00000008943	sf3b2	84	77.971	Xiphophorus_couchianus
ENSBTAG00000002778	SF3B2	97	64.951	ENSXMAG00000008467	sf3b2	86	70.951	Xiphophorus_maculatus