EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000003101 (Gene tree)
Gene ID: 541170
Gene Symbol: SALL4
Alias: -
Full Name: Bos taurus spalt like transcription factor 4 (SALL4)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 15896 bases
Position: chr13:79567590-79583485
Accession: NM_001192836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000004035	zf-C2H2	PF00096.26	1.3e-26	1	6
ENSBTAP00000004035	zf-C2H2	PF00096.26	1.3e-26	2	6
ENSBTAP00000004035	zf-C2H2	PF00096.26	1.3e-26	3	6
ENSBTAP00000004035	zf-C2H2	PF00096.26	1.3e-26	4	6
ENSBTAP00000004035	zf-C2H2	PF00096.26	1.3e-26	5	6
ENSBTAP00000004035	zf-C2H2	PF00096.26	1.3e-26	6	6
ENSBTAP00000004035	zf-met	PF12874.7	6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSBTAG00000003101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000003101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000003101	SALL4	62	52.000	ENSBTAG00000017517	ZNF236	69	51.111
ENSBTAG00000003101	SALL4	100	64.706	ENSBTAG00000008544	SALL1	98	59.615
ENSBTAG00000003101	SALL4	71	59.615	ENSBTAG00000050200	SALL3	96	58.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000003101	SALL4	100	79.793	ENSG00000101115	SALL4	93	96.000	Homo_sapiens
ENSBTAG00000003101	SALL4	100	42.820	ENSAPOG00000002465	sall4	100	42.544	Acanthochromis_polyacanthus
ENSBTAG00000003101	SALL4	100	82.237	ENSAMEG00000013250	-	100	82.237	Ailuropoda_melanoleuca
ENSBTAG00000003101	SALL4	100	42.132	ENSACIG00000017298	sall4	100	41.860	Amphilophus_citrinellus
ENSBTAG00000003101	SALL4	100	43.293	ENSAOCG00000023678	sall4	100	42.770	Amphiprion_ocellaris
ENSBTAG00000003101	SALL4	100	43.206	ENSAPEG00000000751	sall4	100	42.683	Amphiprion_percula
ENSBTAG00000003101	SALL4	100	42.548	ENSATEG00000024480	sall4	100	42.188	Anabas_testudineus
ENSBTAG00000003101	SALL4	100	53.074	ENSAPLG00000006498	SALL4	100	52.850	Anas_platyrhynchos
ENSBTAG00000003101	SALL4	100	52.641	ENSACAG00000012748	SALL4	100	52.509	Anolis_carolinensis
ENSBTAG00000003101	SALL4	100	80.451	ENSANAG00000023352	SALL4	93	96.000	Aotus_nancymaae
ENSBTAG00000003101	SALL4	100	42.427	ENSACLG00000017851	sall4	100	42.060	Astatotilapia_calliptera
ENSBTAG00000003101	SALL4	99	43.766	ENSAMXG00000001254	sall4	99	44.768	Astyanax_mexicanus
ENSBTAG00000003101	SALL4	80	81.434	ENSCJAG00000000591	SALL4	99	81.434	Callithrix_jacchus
ENSBTAG00000003101	SALL4	100	81.656	ENSCAFG00000011738	-	100	81.656	Canis_familiaris
ENSBTAG00000003101	SALL4	100	81.562	ENSCAFG00020021870	SALL4	100	81.562	Canis_lupus_dingo
ENSBTAG00000003101	SALL4	100	96.147	ENSCHIG00000026270	SALL4	100	96.147	Capra_hircus
ENSBTAG00000003101	SALL4	100	78.330	ENSTSYG00000007359	SALL4	93	95.833	Carlito_syrichta
ENSBTAG00000003101	SALL4	96	74.902	ENSCAPG00000012135	SALL4	97	75.220	Cavia_aperea
ENSBTAG00000003101	SALL4	100	74.882	ENSCCAG00000029512	-	100	78.307	Cebus_capucinus
ENSBTAG00000003101	SALL4	100	79.981	ENSCATG00000030757	SALL4	93	96.000	Cercocebus_atys
ENSBTAG00000003101	SALL4	100	77.413	ENSCLAG00000010479	SALL4	93	92.000	Chinchilla_lanigera
ENSBTAG00000003101	SALL4	100	79.981	ENSCSAG00000015269	SALL4	100	80.075	Chlorocebus_sabaeus
ENSBTAG00000003101	SALL4	100	53.450	ENSCPBG00000014995	SALL4	99	54.680	Chrysemys_picta_bellii
ENSBTAG00000003101	SALL4	100	79.981	ENSCANG00000036463	SALL4	100	80.075	Colobus_angolensis_palliatus
ENSBTAG00000003101	SALL4	100	69.094	ENSCGRG00001019569	Sall4	100	69.615	Cricetulus_griseus_chok1gshd
ENSBTAG00000003101	SALL4	100	68.814	ENSCGRG00000000462	Sall4	100	81.481	Cricetulus_griseus_crigri
ENSBTAG00000003101	SALL4	100	42.448	ENSCSEG00000014604	sall4	100	42.159	Cynoglossus_semilaevis
ENSBTAG00000003101	SALL4	100	42.820	ENSCVAG00000010815	sall4	100	42.671	Cyprinodon_variegatus
ENSBTAG00000003101	SALL4	99	43.478	ENSDARG00000044485	sall4	99	43.223	Danio_rerio
ENSBTAG00000003101	SALL4	100	78.028	ENSDNOG00000040633	SALL4	100	78.122	Dasypus_novemcinctus
ENSBTAG00000003101	SALL4	100	67.760	ENSDORG00000012841	Sall4	100	82.979	Dipodomys_ordii
ENSBTAG00000003101	SALL4	66	76.000	ENSETEG00000012475	-	64	76.000	Echinops_telfairi
ENSBTAG00000003101	SALL4	100	82.126	ENSECAG00000018533	SALL4	100	82.126	Equus_caballus
ENSBTAG00000003101	SALL4	100	75.165	ENSEEUG00000003649	SALL4	99	75.353	Erinaceus_europaeus
ENSBTAG00000003101	SALL4	100	41.723	ENSELUG00000005696	sall4	93	67.308	Esox_lucius
ENSBTAG00000003101	SALL4	100	80.469	ENSFCAG00000002822	SALL4	93	91.416	Felis_catus
ENSBTAG00000003101	SALL4	100	52.269	ENSFALG00000013149	SALL4	100	53.003	Ficedula_albicollis
ENSBTAG00000003101	SALL4	100	76.576	ENSFDAG00000017812	SALL4	93	92.000	Fukomys_damarensis
ENSBTAG00000003101	SALL4	100	44.589	ENSFHEG00000014187	sall4	100	43.983	Fundulus_heteroclitus
ENSBTAG00000003101	SALL4	100	41.075	ENSGMOG00000003822	sall4	100	41.340	Gadus_morhua
ENSBTAG00000003101	SALL4	100	52.723	ENSGALG00000041365	SALL4	99	54.815	Gallus_gallus
ENSBTAG00000003101	SALL4	100	43.674	ENSGAFG00000019925	sall4	100	43.166	Gambusia_affinis
ENSBTAG00000003101	SALL4	100	40.241	ENSGACG00000011124	sall4	100	40.515	Gasterosteus_aculeatus
ENSBTAG00000003101	SALL4	100	53.322	ENSGAGG00000002297	SALL4	100	53.229	Gopherus_agassizii
ENSBTAG00000003101	SALL4	100	80.075	ENSGGOG00000001832	SALL4	93	96.000	Gorilla_gorilla
ENSBTAG00000003101	SALL4	100	42.364	ENSHBUG00000007327	sall4	100	41.997	Haplochromis_burtoni
ENSBTAG00000003101	SALL4	96	78.333	ENSHGLG00000009043	SALL4	96	78.869	Heterocephalus_glaber_female
ENSBTAG00000003101	SALL4	96	78.431	ENSHGLG00100002722	SALL4	96	78.968	Heterocephalus_glaber_male
ENSBTAG00000003101	SALL4	100	42.032	ENSHCOG00000008519	sall4	100	41.718	Hippocampus_comes
ENSBTAG00000003101	SALL4	99	43.879	ENSIPUG00000019170	sall4	99	43.313	Ictalurus_punctatus
ENSBTAG00000003101	SALL4	68	83.539	ENSSTOG00000025002	SALL4	100	91.549	Ictidomys_tridecemlineatus
ENSBTAG00000003101	SALL4	100	76.916	ENSJJAG00000020688	Sall4	100	92.958	Jaculus_jaculus
ENSBTAG00000003101	SALL4	100	43.215	ENSKMAG00000002501	sall4	100	42.479	Kryptolebias_marmoratus
ENSBTAG00000003101	SALL4	100	42.857	ENSLBEG00000019951	sall4	100	42.646	Labrus_bergylta
ENSBTAG00000003101	SALL4	93	44.486	ENSLACG00000013898	SALL4	100	55.556	Latimeria_chalumnae
ENSBTAG00000003101	SALL4	100	45.611	ENSLOCG00000002427	sall4	100	45.078	Lepisosteus_oculatus
ENSBTAG00000003101	SALL4	100	77.465	ENSLAFG00000004309	SALL4	100	77.183	Loxodonta_africana
ENSBTAG00000003101	SALL4	100	80.169	ENSMFAG00000027169	SALL4	100	80.263	Macaca_fascicularis
ENSBTAG00000003101	SALL4	90	80.083	ENSMMUG00000003870	SALL4	93	96.000	Macaca_mulatta
ENSBTAG00000003101	SALL4	90	80.188	ENSMNEG00000035995	SALL4	93	96.000	Macaca_nemestrina
ENSBTAG00000003101	SALL4	100	79.981	ENSMLEG00000030467	SALL4	100	80.075	Mandrillus_leucophaeus
ENSBTAG00000003101	SALL4	100	42.416	ENSMAMG00000005223	sall4	100	42.321	Mastacembelus_armatus
ENSBTAG00000003101	SALL4	100	42.427	ENSMZEG00005023418	sall4	100	42.060	Maylandia_zebra
ENSBTAG00000003101	SALL4	79	65.385	ENSMGAG00000009344	SALL4	99	65.385	Meleagris_gallopavo
ENSBTAG00000003101	SALL4	100	69.152	ENSMAUG00000015814	Sall4	100	87.500	Mesocricetus_auratus
ENSBTAG00000003101	SALL4	100	79.323	ENSMICG00000000027	SALL4	95	92.000	Microcebus_murinus
ENSBTAG00000003101	SALL4	100	71.933	ENSMOCG00000018245	Sall4	100	93.151	Microtus_ochrogaster
ENSBTAG00000003101	SALL4	100	42.770	ENSMMOG00000014929	sall4	100	42.174	Mola_mola
ENSBTAG00000003101	SALL4	100	57.451	ENSMODG00000016387	SALL4	97	57.540	Monodelphis_domestica
ENSBTAG00000003101	SALL4	100	42.808	ENSMALG00000018709	sall4	100	42.550	Monopterus_albus
ENSBTAG00000003101	SALL4	100	67.963	MGP_CAROLIEiJ_G0024723	Sall4	100	91.667	Mus_caroli
ENSBTAG00000003101	SALL4	100	67.870	ENSMUSG00000027547	Sall4	100	91.667	Mus_musculus
ENSBTAG00000003101	SALL4	100	67.582	MGP_PahariEiJ_G0026164	Sall4	100	91.667	Mus_pahari
ENSBTAG00000003101	SALL4	100	67.963	MGP_SPRETEiJ_G0025643	Sall4	100	91.667	Mus_spretus
ENSBTAG00000003101	SALL4	100	83.005	ENSMPUG00000017543	SALL4	96	83.005	Mustela_putorius_furo
ENSBTAG00000003101	SALL4	95	79.365	ENSMLUG00000007060	-	99	79.365	Myotis_lucifugus
ENSBTAG00000003101	SALL4	99	58.137	ENSMLUG00000028073	-	99	57.845	Myotis_lucifugus
ENSBTAG00000003101	SALL4	100	69.897	ENSMLUG00000008405	-	100	69.897	Myotis_lucifugus
ENSBTAG00000003101	SALL4	100	74.369	ENSNGAG00000017833	Sall4	99	84.615	Nannospalax_galili
ENSBTAG00000003101	SALL4	100	41.983	ENSNBRG00000001829	sall4	100	42.055	Neolamprologus_brichardi
ENSBTAG00000003101	SALL4	100	80.075	ENSNLEG00000007013	SALL4	100	80.169	Nomascus_leucogenys
ENSBTAG00000003101	SALL4	82	65.385	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSBTAG00000003101	SALL4	100	76.075	ENSOPRG00000011640	SALL4	100	75.981	Ochotona_princeps
ENSBTAG00000003101	SALL4	100	42.548	ENSONIG00000016557	sall4	100	42.311	Oreochromis_niloticus
ENSBTAG00000003101	SALL4	100	58.437	ENSOANG00000008667	SALL4	97	57.815	Ornithorhynchus_anatinus
ENSBTAG00000003101	SALL4	96	76.488	ENSOCUG00000011797	SALL4	99	76.900	Oryctolagus_cuniculus
ENSBTAG00000003101	SALL4	100	43.345	ENSORLG00000016130	sall4	100	43.082	Oryzias_latipes
ENSBTAG00000003101	SALL4	100	42.993	ENSORLG00020007339	sall4	100	43.243	Oryzias_latipes_hni
ENSBTAG00000003101	SALL4	100	43.368	ENSORLG00015002265	sall4	100	42.932	Oryzias_latipes_hsok
ENSBTAG00000003101	SALL4	100	43.870	ENSOMEG00000017344	sall4	100	43.608	Oryzias_melastigma
ENSBTAG00000003101	SALL4	94	78.104	ENSOGAG00000013799	SALL4	99	78.104	Otolemur_garnettii
ENSBTAG00000003101	SALL4	100	88.124	ENSOARG00000014570	SALL4	100	87.936	Ovis_aries
ENSBTAG00000003101	SALL4	100	80.169	ENSPPAG00000038064	SALL4	93	96.000	Pan_paniscus
ENSBTAG00000003101	SALL4	100	80.939	ENSPPRG00000008677	SALL4	93	90.987	Panthera_pardus
ENSBTAG00000003101	SALL4	100	80.169	ENSPTRG00000013631	SALL4	93	96.000	Pan_troglodytes
ENSBTAG00000003101	SALL4	90	80.188	ENSPANG00000021792	SALL4	93	96.000	Papio_anubis
ENSBTAG00000003101	SALL4	100	43.636	ENSPKIG00000007074	sall4	100	43.227	Paramormyrops_kingsleyae
ENSBTAG00000003101	SALL4	100	52.185	ENSPSIG00000009066	SALL4	100	52.136	Pelodiscus_sinensis
ENSBTAG00000003101	SALL4	100	41.823	ENSPMGG00000022551	sall4	100	41.815	Periophthalmus_magnuspinnatus
ENSBTAG00000003101	SALL4	100	71.521	ENSPEMG00000022706	Sall4	99	90.278	Peromyscus_maniculatus_bairdii
ENSBTAG00000003101	SALL4	100	55.761	ENSPCIG00000022838	SALL4	97	56.025	Phascolarctos_cinereus
ENSBTAG00000003101	SALL4	100	43.913	ENSPFOG00000001442	sall4	100	43.403	Poecilia_formosa
ENSBTAG00000003101	SALL4	100	43.826	ENSPLAG00000008760	sall4	100	43.316	Poecilia_latipinna
ENSBTAG00000003101	SALL4	100	43.913	ENSPMEG00000008497	sall4	100	43.576	Poecilia_mexicana
ENSBTAG00000003101	SALL4	100	43.886	ENSPREG00000021140	sall4	100	43.290	Poecilia_reticulata
ENSBTAG00000003101	SALL4	100	79.699	ENSPPYG00000011138	SALL4	100	79.699	Pongo_abelii
ENSBTAG00000003101	SALL4	100	73.308	ENSPCAG00000004726	SALL4	99	73.402	Procavia_capensis
ENSBTAG00000003101	SALL4	100	79.962	ENSPCOG00000016321	SALL4	93	92.000	Propithecus_coquereli
ENSBTAG00000003101	SALL4	94	79.359	ENSPVAG00000002075	SALL4	94	79.259	Pteropus_vampyrus
ENSBTAG00000003101	SALL4	100	41.983	ENSPNYG00000021738	sall4	100	41.617	Pundamilia_nyererei
ENSBTAG00000003101	SALL4	99	43.696	ENSPNAG00000020929	sall4	99	43.005	Pygocentrus_nattereri
ENSBTAG00000003101	SALL4	100	69.032	ENSRNOG00000050035	Sall4	100	68.848	Rattus_norvegicus
ENSBTAG00000003101	SALL4	100	79.887	ENSRBIG00000039876	SALL4	100	80.188	Rhinopithecus_bieti
ENSBTAG00000003101	SALL4	100	79.981	ENSRROG00000036585	SALL4	100	80.075	Rhinopithecus_roxellana
ENSBTAG00000003101	SALL4	100	79.586	ENSSBOG00000030011	SALL4	93	92.000	Saimiri_boliviensis_boliviensis
ENSBTAG00000003101	SALL4	100	70.142	ENSSHAG00000018013	SALL4	95	70.142	Sarcophilus_harrisii
ENSBTAG00000003101	SALL4	100	43.455	ENSSFOG00015021075	sall4	100	43.220	Scleropages_formosus
ENSBTAG00000003101	SALL4	100	42.284	ENSSMAG00000019218	sall4	99	41.761	Scophthalmus_maximus
ENSBTAG00000003101	SALL4	100	42.969	ENSSDUG00000004657	sall4	100	42.609	Seriola_dumerili
ENSBTAG00000003101	SALL4	100	42.746	ENSSLDG00000004973	sall4	100	42.474	Seriola_lalandi_dorsalis
ENSBTAG00000003101	SALL4	100	42.361	ENSSPAG00000001978	sall4	100	42.133	Stegastes_partitus
ENSBTAG00000003101	SALL4	100	82.707	ENSSSCG00000007479	SALL4	100	82.707	Sus_scrofa
ENSBTAG00000003101	SALL4	100	43.206	ENSTRUG00000007410	sall4	100	43.231	Takifugu_rubripes
ENSBTAG00000003101	SALL4	100	43.739	ENSTNIG00000012460	sall4	100	43.120	Tetraodon_nigroviridis
ENSBTAG00000003101	SALL4	96	79.371	ENSTTRG00000007753	SALL4	99	79.762	Tursiops_truncatus
ENSBTAG00000003101	SALL4	100	82.237	ENSUAMG00000010113	SALL4	100	82.237	Ursus_americanus
ENSBTAG00000003101	SALL4	96	80.504	ENSUMAG00000024274	SALL4	99	80.743	Ursus_maritimus
ENSBTAG00000003101	SALL4	100	47.322	ENSXETG00000012326	sall4	100	47.018	Xenopus_tropicalis
ENSBTAG00000003101	SALL4	100	41.156	ENSXCOG00000015467	sall4	100	40.869	Xiphophorus_couchianus
ENSBTAG00000003101	SALL4	100	40.969	ENSXMAG00000012692	sall4	100	40.457	Xiphophorus_maculatus