EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000003112 (Gene tree)
Gene ID: 508940
Gene Symbol: THUMPD3
Alias: -
Full Name: Bos taurus THUMP domain containing 3 (THUMPD3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 19755 bases
Position: chr22:17219839-17239593
Accession: NM_001038062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000070600	THUMP	PF02926.17	1.3e-11	1	1
ENSBTAP00000004047	THUMP	PF02926.17	1.3e-11	1	1
ENSBTAP00000070600	UPF0020	PF01170.18	1.5e-51	1	1
ENSBTAP00000004047	UPF0020	PF01170.18	1.5e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000004047	-	1675	-	ENSBTAP00000004047	506 (aa)	-	F1N027
ENSBTAT00000083515	-	1968	-	ENSBTAP00000070600	503 (aa)	XP_005222456	UPI000383FE48

Gene Model

Click here to download ENSBTAG00000003112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000003112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000003112	THUMPD3	99	84.000	ENSG00000134077	THUMPD3	100	86.290	Homo_sapiens
ENSBTAG00000003112	THUMPD3	94	62.395	ENSAPOG00000015836	thumpd3	94	62.395	Acanthochromis_polyacanthus
ENSBTAG00000003112	THUMPD3	100	87.873	ENSAMEG00000011321	THUMPD3	100	87.873	Ailuropoda_melanoleuca
ENSBTAG00000003112	THUMPD3	91	61.304	ENSACIG00000020096	thumpd3	89	61.957	Amphilophus_citrinellus
ENSBTAG00000003112	THUMPD3	91	63.203	ENSAOCG00000004399	thumpd3	89	63.203	Amphiprion_ocellaris
ENSBTAG00000003112	THUMPD3	91	63.203	ENSAPEG00000016740	thumpd3	89	63.203	Amphiprion_percula
ENSBTAG00000003112	THUMPD3	92	62.635	ENSATEG00000005345	thumpd3	90	62.635	Anabas_testudineus
ENSBTAG00000003112	THUMPD3	78	72.292	ENSAPLG00000003598	THUMPD3	99	72.292	Anas_platyrhynchos
ENSBTAG00000003112	THUMPD3	97	65.686	ENSACAG00000014974	THUMPD3	98	65.686	Anolis_carolinensis
ENSBTAG00000003112	THUMPD3	99	82.000	ENSANAG00000002365	THUMPD3	99	82.000	Aotus_nancymaae
ENSBTAG00000003112	THUMPD3	65	67.857	ENSACLG00000013504	-	73	67.857	Astatotilapia_calliptera
ENSBTAG00000003112	THUMPD3	91	62.338	ENSACLG00000023333	thumpd3	89	60.435	Astatotilapia_calliptera
ENSBTAG00000003112	THUMPD3	96	59.459	ENSAMXG00000015683	thumpd3	96	59.831	Astyanax_mexicanus
ENSBTAG00000003112	THUMPD3	87	34.240	WBGene00010846	M04B2.2	96	33.941	Caenorhabditis_elegans
ENSBTAG00000003112	THUMPD3	99	81.200	ENSCJAG00000015949	THUMPD3	99	81.200	Callithrix_jacchus
ENSBTAG00000003112	THUMPD3	100	88.668	ENSCAFG00000005499	THUMPD3	100	88.668	Canis_familiaris
ENSBTAG00000003112	THUMPD3	76	87.206	ENSCAFG00000008060	-	93	87.206	Canis_familiaris
ENSBTAG00000003112	THUMPD3	100	88.668	ENSCAFG00020008895	-	100	88.668	Canis_lupus_dingo
ENSBTAG00000003112	THUMPD3	84	87.173	ENSCAFG00020025887	-	97	87.173	Canis_lupus_dingo
ENSBTAG00000003112	THUMPD3	100	97.036	ENSCHIG00000024037	THUMPD3	100	97.036	Capra_hircus
ENSBTAG00000003112	THUMPD3	99	84.000	ENSTSYG00000000159	THUMPD3	99	84.000	Carlito_syrichta
ENSBTAG00000003112	THUMPD3	100	56.522	ENSCAPG00000017486	THUMPD3	100	56.126	Cavia_aperea
ENSBTAG00000003112	THUMPD3	100	83.960	ENSCPOG00000033287	THUMPD3	100	83.960	Cavia_porcellus
ENSBTAG00000003112	THUMPD3	99	74.800	ENSCCAG00000021429	-	99	74.800	Cebus_capucinus
ENSBTAG00000003112	THUMPD3	99	81.800	ENSCCAG00000027067	-	99	81.800	Cebus_capucinus
ENSBTAG00000003112	THUMPD3	99	83.000	ENSCATG00000040999	THUMPD3	99	83.000	Cercocebus_atys
ENSBTAG00000003112	THUMPD3	100	85.347	ENSCLAG00000000690	THUMPD3	100	85.347	Chinchilla_lanigera
ENSBTAG00000003112	THUMPD3	99	82.800	ENSCSAG00000010753	THUMPD3	99	82.800	Chlorocebus_sabaeus
ENSBTAG00000003112	THUMPD3	86	64.610	ENSCHOG00000012851	THUMPD3	84	63.636	Choloepus_hoffmanni
ENSBTAG00000003112	THUMPD3	97	69.739	ENSCPBG00000014771	THUMPD3	98	70.200	Chrysemys_picta_bellii
ENSBTAG00000003112	THUMPD3	90	42.105	ENSCSAVG00000008668	-	97	41.630	Ciona_savignyi
ENSBTAG00000003112	THUMPD3	99	82.800	ENSCANG00000031901	THUMPD3	99	82.800	Colobus_angolensis_palliatus
ENSBTAG00000003112	THUMPD3	99	82.869	ENSCGRG00001024117	Thumpd3	99	82.869	Cricetulus_griseus_chok1gshd
ENSBTAG00000003112	THUMPD3	99	82.869	ENSCGRG00000018116	Thumpd3	99	82.869	Cricetulus_griseus_crigri
ENSBTAG00000003112	THUMPD3	93	60.510	ENSCSEG00000002546	thumpd3	94	60.254	Cynoglossus_semilaevis
ENSBTAG00000003112	THUMPD3	91	61.771	ENSCVAG00000001019	thumpd3	93	59.343	Cyprinodon_variegatus
ENSBTAG00000003112	THUMPD3	92	62.284	ENSDARG00000059634	thumpd3	95	62.284	Danio_rerio
ENSBTAG00000003112	THUMPD3	99	86.720	ENSDNOG00000047668	THUMPD3	100	85.748	Dasypus_novemcinctus
ENSBTAG00000003112	THUMPD3	99	83.735	ENSDORG00000003257	Thumpd3	99	83.735	Dipodomys_ordii
ENSBTAG00000003112	THUMPD3	67	79.290	ENSETEG00000020239	-	66	79.290	Echinops_telfairi
ENSBTAG00000003112	THUMPD3	87	53.531	ENSEBUG00000004221	thumpd3	95	53.531	Eptatretus_burgeri
ENSBTAG00000003112	THUMPD3	100	86.879	ENSEASG00005013327	THUMPD3	100	86.879	Equus_asinus_asinus
ENSBTAG00000003112	THUMPD3	100	89.264	ENSECAG00000002016	THUMPD3	100	89.264	Equus_caballus
ENSBTAG00000003112	THUMPD3	100	79.324	ENSEEUG00000014696	THUMPD3	99	79.324	Erinaceus_europaeus
ENSBTAG00000003112	THUMPD3	87	70.486	ENSELUG00000018246	thumpd3	72	70.486	Esox_lucius
ENSBTAG00000003112	THUMPD3	100	89.264	ENSFCAG00000006171	THUMPD3	99	89.264	Felis_catus
ENSBTAG00000003112	THUMPD3	88	64.348	ENSFALG00000013631	THUMPD3	91	65.772	Ficedula_albicollis
ENSBTAG00000003112	THUMPD3	100	84.356	ENSFDAG00000014825	THUMPD3	100	84.356	Fukomys_damarensis
ENSBTAG00000003112	THUMPD3	91	61.087	ENSFHEG00000006006	thumpd3	90	61.255	Fundulus_heteroclitus
ENSBTAG00000003112	THUMPD3	92	58.333	ENSGMOG00000007923	thumpd3	90	58.658	Gadus_morhua
ENSBTAG00000003112	THUMPD3	92	66.393	ENSGALG00000044813	THUMPD3	97	66.598	Gallus_gallus
ENSBTAG00000003112	THUMPD3	98	59.356	ENSGAFG00000021645	thumpd3	95	58.800	Gambusia_affinis
ENSBTAG00000003112	THUMPD3	91	61.087	ENSGACG00000000930	thumpd3	94	60.129	Gasterosteus_aculeatus
ENSBTAG00000003112	THUMPD3	97	69.539	ENSGAGG00000022750	THUMPD3	98	69.539	Gopherus_agassizii
ENSBTAG00000003112	THUMPD3	99	83.600	ENSGGOG00000000604	THUMPD3	98	83.600	Gorilla_gorilla
ENSBTAG00000003112	THUMPD3	91	61.739	ENSHBUG00000013405	thumpd3	89	60.435	Haplochromis_burtoni
ENSBTAG00000003112	THUMPD3	100	83.960	ENSHGLG00000016200	THUMPD3	100	83.960	Heterocephalus_glaber_female
ENSBTAG00000003112	THUMPD3	96	73.196	ENSHGLG00100000505	-	100	73.196	Heterocephalus_glaber_male
ENSBTAG00000003112	THUMPD3	100	83.960	ENSHGLG00100017321	-	100	83.960	Heterocephalus_glaber_male
ENSBTAG00000003112	THUMPD3	91	59.957	ENSHCOG00000004871	thumpd3	93	59.957	Hippocampus_comes
ENSBTAG00000003112	THUMPD3	90	60.652	ENSIPUG00000019415	THUMPD3	90	60.000	Ictalurus_punctatus
ENSBTAG00000003112	THUMPD3	100	85.913	ENSSTOG00000003973	THUMPD3	100	85.913	Ictidomys_tridecemlineatus
ENSBTAG00000003112	THUMPD3	99	73.800	ENSJJAG00000017751	Thumpd3	98	73.800	Jaculus_jaculus
ENSBTAG00000003112	THUMPD3	92	61.290	ENSKMAG00000021025	thumpd3	85	61.075	Kryptolebias_marmoratus
ENSBTAG00000003112	THUMPD3	91	61.290	ENSLBEG00000012252	thumpd3	89	60.521	Labrus_bergylta
ENSBTAG00000003112	THUMPD3	99	60.352	ENSLACG00000018604	THUMPD3	99	59.961	Latimeria_chalumnae
ENSBTAG00000003112	THUMPD3	91	62.370	ENSLOCG00000009800	thumpd3	95	61.954	Lepisosteus_oculatus
ENSBTAG00000003112	THUMPD3	99	85.828	ENSLAFG00000005103	THUMPD3	99	85.828	Loxodonta_africana
ENSBTAG00000003112	THUMPD3	99	82.800	ENSMFAG00000044884	THUMPD3	99	82.800	Macaca_fascicularis
ENSBTAG00000003112	THUMPD3	99	82.800	ENSMMUG00000017307	THUMPD3	99	82.800	Macaca_mulatta
ENSBTAG00000003112	THUMPD3	99	82.800	ENSMNEG00000030529	THUMPD3	99	82.800	Macaca_nemestrina
ENSBTAG00000003112	THUMPD3	99	82.800	ENSMLEG00000032943	THUMPD3	99	82.800	Mandrillus_leucophaeus
ENSBTAG00000003112	THUMPD3	93	61.099	ENSMAMG00000023934	thumpd3	91	60.549	Mastacembelus_armatus
ENSBTAG00000003112	THUMPD3	91	62.338	ENSMZEG00005010623	thumpd3	89	60.435	Maylandia_zebra
ENSBTAG00000003112	THUMPD3	80	69.307	ENSMGAG00000010182	THUMPD3	100	69.554	Meleagris_gallopavo
ENSBTAG00000003112	THUMPD3	99	83.865	ENSMAUG00000012250	Thumpd3	99	83.865	Mesocricetus_auratus
ENSBTAG00000003112	THUMPD3	97	80.478	ENSMICG00000010095	THUMPD3	96	80.478	Microcebus_murinus
ENSBTAG00000003112	THUMPD3	99	82.704	ENSMOCG00000020148	Thumpd3	99	82.704	Microtus_ochrogaster
ENSBTAG00000003112	THUMPD3	92	59.110	ENSMMOG00000021791	thumpd3	94	59.355	Mola_mola
ENSBTAG00000003112	THUMPD3	99	74.067	ENSMODG00000004715	-	99	73.674	Monodelphis_domestica
ENSBTAG00000003112	THUMPD3	90	61.233	ENSMALG00000017316	thumpd3	93	60.087	Monopterus_albus
ENSBTAG00000003112	THUMPD3	62	77.707	MGP_CAROLIEiJ_G0028714	-	65	77.707	Mus_caroli
ENSBTAG00000003112	THUMPD3	99	82.000	ENSMUSG00000030264	Thumpd3	99	82.000	Mus_musculus
ENSBTAG00000003112	THUMPD3	100	80.556	MGP_PahariEiJ_G0022465	Thumpd3	100	80.556	Mus_pahari
ENSBTAG00000003112	THUMPD3	100	81.944	MGP_SPRETEiJ_G0029742	Thumpd3	100	81.944	Mus_spretus
ENSBTAG00000003112	THUMPD3	100	88.072	ENSMPUG00000017066	-	99	88.072	Mustela_putorius_furo
ENSBTAG00000003112	THUMPD3	99	81.000	ENSMPUG00000005219	-	99	80.800	Mustela_putorius_furo
ENSBTAG00000003112	THUMPD3	99	87.174	ENSMLUG00000008538	THUMPD3	97	87.174	Myotis_lucifugus
ENSBTAG00000003112	THUMPD3	99	85.060	ENSNGAG00000021014	-	99	85.060	Nannospalax_galili
ENSBTAG00000003112	THUMPD3	99	67.928	ENSNGAG00000001549	-	99	67.729	Nannospalax_galili
ENSBTAG00000003112	THUMPD3	91	62.338	ENSNBRG00000004886	thumpd3	89	62.338	Neolamprologus_brichardi
ENSBTAG00000003112	THUMPD3	99	83.800	ENSNLEG00000003863	THUMPD3	99	83.800	Nomascus_leucogenys
ENSBTAG00000003112	THUMPD3	83	75.300	ENSMEUG00000009819	THUMPD3	98	75.300	Notamacropus_eugenii
ENSBTAG00000003112	THUMPD3	83	82.143	ENSOPRG00000002020	THUMPD3	98	83.212	Ochotona_princeps
ENSBTAG00000003112	THUMPD3	71	83.380	ENSODEG00000018242	THUMPD3	100	83.380	Octodon_degus
ENSBTAG00000003112	THUMPD3	91	61.822	ENSONIG00000018977	thumpd3	89	60.435	Oreochromis_niloticus
ENSBTAG00000003112	THUMPD3	82	68.029	ENSOANG00000014481	THUMPD3	98	68.029	Ornithorhynchus_anatinus
ENSBTAG00000003112	THUMPD3	100	83.497	ENSOCUG00000010921	THUMPD3	100	83.497	Oryctolagus_cuniculus
ENSBTAG00000003112	THUMPD3	95	58.628	ENSORLG00000000676	thumpd3	94	58.299	Oryzias_latipes
ENSBTAG00000003112	THUMPD3	95	59.044	ENSORLG00020007509	thumpd3	94	59.044	Oryzias_latipes_hni
ENSBTAG00000003112	THUMPD3	95	59.044	ENSORLG00015003615	thumpd3	94	58.714	Oryzias_latipes_hsok
ENSBTAG00000003112	THUMPD3	93	59.701	ENSOMEG00000014115	thumpd3	92	59.275	Oryzias_melastigma
ENSBTAG00000003112	THUMPD3	82	83.010	ENSOGAG00000017111	THUMPD3	100	83.010	Otolemur_garnettii
ENSBTAG00000003112	THUMPD3	99	96.794	ENSOARG00000007139	THUMPD3	97	96.794	Ovis_aries
ENSBTAG00000003112	THUMPD3	99	83.600	ENSPPAG00000025852	THUMPD3	98	83.600	Pan_paniscus
ENSBTAG00000003112	THUMPD3	100	89.662	ENSPPRG00000008071	THUMPD3	99	89.662	Panthera_pardus
ENSBTAG00000003112	THUMPD3	100	89.264	ENSPTIG00000017923	THUMPD3	100	89.264	Panthera_tigris_altaica
ENSBTAG00000003112	THUMPD3	99	84.000	ENSPTRG00000014585	THUMPD3	98	84.000	Pan_troglodytes
ENSBTAG00000003112	THUMPD3	99	82.800	ENSPANG00000016253	THUMPD3	99	82.800	Papio_anubis
ENSBTAG00000003112	THUMPD3	94	64.000	ENSPKIG00000014009	thumpd3	95	64.000	Paramormyrops_kingsleyae
ENSBTAG00000003112	THUMPD3	97	68.813	ENSPSIG00000007370	THUMPD3	98	68.813	Pelodiscus_sinensis
ENSBTAG00000003112	THUMPD3	91	63.124	ENSPMGG00000017563	thumpd3	93	63.124	Periophthalmus_magnuspinnatus
ENSBTAG00000003112	THUMPD3	100	83.730	ENSPEMG00000022411	Thumpd3	100	83.730	Peromyscus_maniculatus_bairdii
ENSBTAG00000003112	THUMPD3	92	53.402	ENSPMAG00000001291	thumpd3	99	53.402	Petromyzon_marinus
ENSBTAG00000003112	THUMPD3	99	74.016	ENSPCIG00000002049	THUMPD3	99	74.016	Phascolarctos_cinereus
ENSBTAG00000003112	THUMPD3	98	59.960	ENSPFOG00000002318	thumpd3	95	59.600	Poecilia_formosa
ENSBTAG00000003112	THUMPD3	98	59.960	ENSPLAG00000014804	thumpd3	95	59.600	Poecilia_latipinna
ENSBTAG00000003112	THUMPD3	98	59.960	ENSPMEG00000000582	thumpd3	95	59.600	Poecilia_mexicana
ENSBTAG00000003112	THUMPD3	98	58.954	ENSPREG00000009176	thumpd3	95	58.954	Poecilia_reticulata
ENSBTAG00000003112	THUMPD3	100	61.386	ENSPPYG00000017616	-	99	61.188	Pongo_abelii
ENSBTAG00000003112	THUMPD3	99	83.800	ENSPPYG00000029461	THUMPD3	99	83.800	Pongo_abelii
ENSBTAG00000003112	THUMPD3	83	84.964	ENSPCAG00000015398	THUMPD3	99	84.964	Procavia_capensis
ENSBTAG00000003112	THUMPD3	100	76.190	ENSPCOG00000018095	-	100	77.579	Propithecus_coquereli
ENSBTAG00000003112	THUMPD3	87	79.271	ENSPCOG00000023618	-	99	79.271	Propithecus_coquereli
ENSBTAG00000003112	THUMPD3	100	89.328	ENSPVAG00000008721	THUMPD3	100	89.328	Pteropus_vampyrus
ENSBTAG00000003112	THUMPD3	91	62.338	ENSPNYG00000006918	thumpd3	89	60.435	Pundamilia_nyererei
ENSBTAG00000003112	THUMPD3	95	58.058	ENSPNAG00000014936	thumpd3	97	57.732	Pygocentrus_nattereri
ENSBTAG00000003112	THUMPD3	99	81.673	ENSRNOG00000006941	Thumpd3	99	81.673	Rattus_norvegicus
ENSBTAG00000003112	THUMPD3	99	83.000	ENSRBIG00000035954	THUMPD3	99	83.000	Rhinopithecus_bieti
ENSBTAG00000003112	THUMPD3	99	82.800	ENSRROG00000035734	THUMPD3	99	82.800	Rhinopithecus_roxellana
ENSBTAG00000003112	THUMPD3	99	81.800	ENSSBOG00000023567	THUMPD3	99	81.988	Saimiri_boliviensis_boliviensis
ENSBTAG00000003112	THUMPD3	99	73.228	ENSSHAG00000014467	THUMPD3	99	73.228	Sarcophilus_harrisii
ENSBTAG00000003112	THUMPD3	92	63.983	ENSSFOG00015019210	thumpd3	92	63.983	Scleropages_formosus
ENSBTAG00000003112	THUMPD3	91	61.207	ENSSMAG00000000609	thumpd3	93	60.776	Scophthalmus_maximus
ENSBTAG00000003112	THUMPD3	94	60.417	ENSSDUG00000012179	thumpd3	93	62.174	Seriola_dumerili
ENSBTAG00000003112	THUMPD3	94	60.417	ENSSLDG00000022028	thumpd3	94	60.417	Seriola_lalandi_dorsalis
ENSBTAG00000003112	THUMPD3	87	84.940	ENSSARG00000002239	THUMPD3	87	84.431	Sorex_araneus
ENSBTAG00000003112	THUMPD3	98	68.577	ENSSPUG00000017461	THUMPD3	99	68.379	Sphenodon_punctatus
ENSBTAG00000003112	THUMPD3	94	60.714	ENSSPAG00000008345	thumpd3	91	60.714	Stegastes_partitus
ENSBTAG00000003112	THUMPD3	100	90.457	ENSSSCG00000011542	THUMPD3	100	90.457	Sus_scrofa
ENSBTAG00000003112	THUMPD3	89	69.737	ENSTGUG00000010440	THUMPD3	100	69.737	Taeniopygia_guttata
ENSBTAG00000003112	THUMPD3	91	53.763	ENSTRUG00000004420	thumpd3	92	52.609	Takifugu_rubripes
ENSBTAG00000003112	THUMPD3	91	61.739	ENSTNIG00000014627	thumpd3	95	61.739	Tetraodon_nigroviridis
ENSBTAG00000003112	THUMPD3	100	80.952	ENSTBEG00000003450	THUMPD3	99	80.952	Tupaia_belangeri
ENSBTAG00000003112	THUMPD3	100	92.445	ENSTTRG00000009694	THUMPD3	99	92.445	Tursiops_truncatus
ENSBTAG00000003112	THUMPD3	100	88.469	ENSUAMG00000009412	THUMPD3	100	88.469	Ursus_americanus
ENSBTAG00000003112	THUMPD3	100	85.686	ENSUMAG00000019241	THUMPD3	100	84.493	Ursus_maritimus
ENSBTAG00000003112	THUMPD3	83	88.729	ENSVPAG00000002855	THUMPD3	100	88.729	Vicugna_pacos
ENSBTAG00000003112	THUMPD3	100	88.867	ENSVVUG00000025278	THUMPD3	100	88.867	Vulpes_vulpes
ENSBTAG00000003112	THUMPD3	97	62.195	ENSXETG00000001447	thumpd3	95	62.195	Xenopus_tropicalis
ENSBTAG00000003112	THUMPD3	99	58.546	ENSXCOG00000000159	thumpd3	99	58.203	Xiphophorus_couchianus
ENSBTAG00000003112	THUMPD3	98	59.155	ENSXMAG00000001423	thumpd3	95	58.600	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function