EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000003239 (Gene tree)
Gene ID: 510487
Gene Symbol: UTP20
Alias: -
Full Name: UTP20%2C small subunit processome component
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 85880 bases
Position: chr5:65183368-65269247
Accession: 36744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000058532	DRIM	PF07539.12	5.5e-175	1	1
ENSBTAP00000004204	DRIM	PF07539.12	5.9e-175	1	1
ENSBTAP00000073840	DRIM	PF07539.12	7.9e-175	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000066699	-	7998	-	ENSBTAP00000058532	2665 (aa)	-	-
ENSBTAT00000004204	-	8337	XM_010805264	ENSBTAP00000004204	2778 (aa)	XP_010803566	E1BGE2
ENSBTAT00000071463	-	8232	-	ENSBTAP00000073840	2743 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000003239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000003239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000003239	UTP20	100	89.238	ENSG00000120800	UTP20	100	89.274	Homo_sapiens
ENSBTAG00000003239	UTP20	100	57.437	ENSAPOG00000002429	utp20	99	57.635	Acanthochromis_polyacanthus
ENSBTAG00000003239	UTP20	100	91.241	ENSAMEG00000016416	UTP20	100	91.241	Ailuropoda_melanoleuca
ENSBTAG00000003239	UTP20	100	56.607	ENSACIG00000007987	utp20	99	56.878	Amphilophus_citrinellus
ENSBTAG00000003239	UTP20	60	57.576	ENSAOCG00000015055	utp20	96	57.601	Amphiprion_ocellaris
ENSBTAG00000003239	UTP20	100	57.224	ENSAPEG00000011605	utp20	99	57.591	Amphiprion_percula
ENSBTAG00000003239	UTP20	98	56.336	ENSATEG00000005601	utp20	99	56.487	Anabas_testudineus
ENSBTAG00000003239	UTP20	99	68.806	ENSAPLG00000015651	UTP20	100	69.038	Anas_platyrhynchos
ENSBTAG00000003239	UTP20	100	67.950	ENSACAG00000011671	UTP20	100	68.068	Anolis_carolinensis
ENSBTAG00000003239	UTP20	100	86.722	ENSANAG00000027152	UTP20	100	87.002	Aotus_nancymaae
ENSBTAG00000003239	UTP20	95	60.606	ENSACLG00000008064	utp20	99	60.606	Astatotilapia_calliptera
ENSBTAG00000003239	UTP20	99	59.038	ENSAMXG00000021039	utp20	99	56.356	Astyanax_mexicanus
ENSBTAG00000003239	UTP20	100	88.094	ENSCJAG00000001913	UTP20	100	88.379	Callithrix_jacchus
ENSBTAG00000003239	UTP20	100	90.481	ENSCAFG00000006964	UTP20	100	90.481	Canis_familiaris
ENSBTAG00000003239	UTP20	100	90.553	ENSCAFG00020024305	UTP20	100	90.553	Canis_lupus_dingo
ENSBTAG00000003239	UTP20	100	97.484	ENSCHIG00000009221	UTP20	100	96.909	Capra_hircus
ENSBTAG00000003239	UTP20	100	86.478	ENSTSYG00000003040	UTP20	100	86.693	Carlito_syrichta
ENSBTAG00000003239	UTP20	99	76.608	ENSCAPG00000014920	UTP20	100	74.613	Cavia_aperea
ENSBTAG00000003239	UTP20	100	77.423	ENSCPOG00000003129	UTP20	100	77.423	Cavia_porcellus
ENSBTAG00000003239	UTP20	100	88.666	ENSCCAG00000031422	UTP20	100	88.953	Cebus_capucinus
ENSBTAG00000003239	UTP20	100	86.015	ENSCATG00000035636	UTP20	100	86.051	Cercocebus_atys
ENSBTAG00000003239	UTP20	100	80.251	ENSCLAG00000011569	UTP20	100	80.251	Chinchilla_lanigera
ENSBTAG00000003239	UTP20	100	89.310	ENSCSAG00000003388	UTP20	100	89.634	Chlorocebus_sabaeus
ENSBTAG00000003239	UTP20	92	95.455	ENSCHOG00000003532	UTP20	94	95.455	Choloepus_hoffmanni
ENSBTAG00000003239	UTP20	95	71.643	ENSCPBG00000004844	UTP20	99	71.718	Chrysemys_picta_bellii
ENSBTAG00000003239	UTP20	99	31.066	ENSCING00000003395	-	98	31.066	Ciona_intestinalis
ENSBTAG00000003239	UTP20	93	31.645	ENSCSAVG00000008252	-	97	31.645	Ciona_savignyi
ENSBTAG00000003239	UTP20	100	86.459	ENSCANG00000034768	UTP20	100	87.714	Colobus_angolensis_palliatus
ENSBTAG00000003239	UTP20	100	85.950	ENSCGRG00001017151	Utp20	100	85.950	Cricetulus_griseus_chok1gshd
ENSBTAG00000003239	UTP20	100	85.632	ENSCGRG00000008595	Utp20	100	85.632	Cricetulus_griseus_crigri
ENSBTAG00000003239	UTP20	98	55.000	ENSCSEG00000014760	utp20	99	55.442	Cynoglossus_semilaevis
ENSBTAG00000003239	UTP20	99	54.491	ENSCVAG00000001727	utp20	99	55.181	Cyprinodon_variegatus
ENSBTAG00000003239	UTP20	99	57.016	ENSDARG00000099280	utp20	99	57.372	Danio_rerio
ENSBTAG00000003239	UTP20	100	88.116	ENSDNOG00000016845	UTP20	100	88.116	Dasypus_novemcinctus
ENSBTAG00000003239	UTP20	97	87.234	ENSDORG00000014762	Utp20	99	87.352	Dipodomys_ordii
ENSBTAG00000003239	UTP20	94	88.987	ENSETEG00000019983	UTP20	94	90.529	Echinops_telfairi
ENSBTAG00000003239	UTP20	98	94.857	ENSEASG00005019981	UTP20	99	94.857	Equus_asinus_asinus
ENSBTAG00000003239	UTP20	98	94.857	ENSECAG00000006876	UTP20	99	94.857	Equus_caballus
ENSBTAG00000003239	UTP20	72	85.929	ENSEEUG00000003774	UTP20	75	85.929	Erinaceus_europaeus
ENSBTAG00000003239	UTP20	100	56.142	ENSELUG00000000798	utp20	99	57.273	Esox_lucius
ENSBTAG00000003239	UTP20	100	90.301	ENSFCAG00000006150	UTP20	100	90.408	Felis_catus
ENSBTAG00000003239	UTP20	94	67.511	ENSFALG00000011135	UTP20	100	67.687	Ficedula_albicollis
ENSBTAG00000003239	UTP20	96	78.131	ENSFDAG00000007567	UTP20	96	78.131	Fukomys_damarensis
ENSBTAG00000003239	UTP20	98	54.545	ENSFHEG00000004142	utp20	99	55.139	Fundulus_heteroclitus
ENSBTAG00000003239	UTP20	99	52.328	ENSGMOG00000006762	utp20	100	52.863	Gadus_morhua
ENSBTAG00000003239	UTP20	100	68.641	ENSGALG00000011643	UTP20	100	68.723	Gallus_gallus
ENSBTAG00000003239	UTP20	97	54.619	ENSGAFG00000006986	utp20	99	54.738	Gambusia_affinis
ENSBTAG00000003239	UTP20	100	55.441	ENSGACG00000019092	utp20	100	55.804	Gasterosteus_aculeatus
ENSBTAG00000003239	UTP20	69	70.985	ENSGAGG00000011169	UTP20	97	71.550	Gopherus_agassizii
ENSBTAG00000003239	UTP20	100	88.345	ENSGGOG00000004904	UTP20	100	88.380	Gorilla_gorilla
ENSBTAG00000003239	UTP20	99	59.659	ENSHBUG00000010613	utp20	99	57.194	Haplochromis_burtoni
ENSBTAG00000003239	UTP20	100	80.453	ENSHGLG00000006422	UTP20	100	80.453	Heterocephalus_glaber_female
ENSBTAG00000003239	UTP20	100	78.677	ENSHGLG00100001086	UTP20	100	78.677	Heterocephalus_glaber_male
ENSBTAG00000003239	UTP20	100	54.058	ENSHCOG00000005421	utp20	97	57.714	Hippocampus_comes
ENSBTAG00000003239	UTP20	100	57.000	ENSIPUG00000013717	utp20	99	57.133	Ictalurus_punctatus
ENSBTAG00000003239	UTP20	100	88.400	ENSSTOG00000015995	UTP20	100	88.400	Ictidomys_tridecemlineatus
ENSBTAG00000003239	UTP20	100	83.507	ENSJJAG00000019321	Utp20	100	83.507	Jaculus_jaculus
ENSBTAG00000003239	UTP20	100	54.272	ENSKMAG00000005972	utp20	99	54.536	Kryptolebias_marmoratus
ENSBTAG00000003239	UTP20	98	54.825	ENSLBEG00000000781	utp20	99	55.303	Labrus_bergylta
ENSBTAG00000003239	UTP20	80	65.800	ENSLACG00000010098	UTP20	100	65.845	Latimeria_chalumnae
ENSBTAG00000003239	UTP20	92	67.158	ENSLOCG00000015197	utp20	94	67.158	Lepisosteus_oculatus
ENSBTAG00000003239	UTP20	100	87.843	ENSLAFG00000012983	UTP20	100	87.950	Loxodonta_africana
ENSBTAG00000003239	UTP20	100	89.417	ENSMFAG00000037766	UTP20	100	89.453	Macaca_fascicularis
ENSBTAG00000003239	UTP20	100	89.596	ENSMMUG00000012891	UTP20	100	89.632	Macaca_mulatta
ENSBTAG00000003239	UTP20	100	87.236	ENSMNEG00000037418	UTP20	100	87.272	Macaca_nemestrina
ENSBTAG00000003239	UTP20	100	86.710	ENSMLEG00000029148	UTP20	100	86.745	Mandrillus_leucophaeus
ENSBTAG00000003239	UTP20	100	56.551	ENSMAMG00000002063	utp20	99	56.985	Mastacembelus_armatus
ENSBTAG00000003239	UTP20	100	56.599	ENSMZEG00005018123	utp20	99	57.412	Maylandia_zebra
ENSBTAG00000003239	UTP20	100	68.483	ENSMGAG00000011726	UTP20	100	68.590	Meleagris_gallopavo
ENSBTAG00000003239	UTP20	65	85.278	ENSMAUG00000011898	Utp20	100	85.278	Mesocricetus_auratus
ENSBTAG00000003239	UTP20	100	85.995	ENSMICG00000015736	UTP20	100	86.174	Microcebus_murinus
ENSBTAG00000003239	UTP20	100	82.730	ENSMOCG00000015242	Utp20	100	82.730	Microtus_ochrogaster
ENSBTAG00000003239	UTP20	100	53.502	ENSMMOG00000003360	utp20	100	54.128	Mola_mola
ENSBTAG00000003239	UTP20	100	73.950	ENSMODG00000003141	UTP20	100	74.128	Monodelphis_domestica
ENSBTAG00000003239	UTP20	100	56.333	ENSMALG00000002723	utp20	99	56.547	Monopterus_albus
ENSBTAG00000003239	UTP20	100	84.982	MGP_CAROLIEiJ_G0015713	Utp20	100	84.982	Mus_caroli
ENSBTAG00000003239	UTP20	100	85.238	ENSMUSG00000004356	Utp20	100	85.382	Mus_musculus
ENSBTAG00000003239	UTP20	100	84.946	MGP_PahariEiJ_G0031372	Utp20	100	84.946	Mus_pahari
ENSBTAG00000003239	UTP20	100	85.064	MGP_SPRETEiJ_G0016531	Utp20	98	97.619	Mus_spretus
ENSBTAG00000003239	UTP20	100	90.495	ENSMPUG00000011641	UTP20	100	90.495	Mustela_putorius_furo
ENSBTAG00000003239	UTP20	100	90.146	ENSMLUG00000002313	UTP20	100	90.182	Myotis_lucifugus
ENSBTAG00000003239	UTP20	100	86.643	ENSNGAG00000013738	Utp20	100	86.643	Nannospalax_galili
ENSBTAG00000003239	UTP20	82	75.385	ENSNBRG00000019464	utp20	99	75.385	Neolamprologus_brichardi
ENSBTAG00000003239	UTP20	100	89.092	ENSNLEG00000006166	UTP20	100	89.127	Nomascus_leucogenys
ENSBTAG00000003239	UTP20	89	100.000	ENSMEUG00000015457	UTP20	91	100.000	Notamacropus_eugenii
ENSBTAG00000003239	UTP20	88	96.178	ENSOPRG00000010546	UTP20	87	96.178	Ochotona_princeps
ENSBTAG00000003239	UTP20	100	80.654	ENSODEG00000013411	UTP20	100	80.654	Octodon_degus
ENSBTAG00000003239	UTP20	99	57.904	ENSONIG00000009910	utp20	100	56.966	Oreochromis_niloticus
ENSBTAG00000003239	UTP20	99	73.429	ENSOANG00000005578	UTP20	99	73.769	Ornithorhynchus_anatinus
ENSBTAG00000003239	UTP20	100	88.631	ENSOCUG00000010475	UTP20	100	88.686	Oryctolagus_cuniculus
ENSBTAG00000003239	UTP20	96	54.683	ENSORLG00000008900	utp20	99	56.751	Oryzias_latipes
ENSBTAG00000003239	UTP20	96	54.545	ENSORLG00020005879	utp20	99	56.118	Oryzias_latipes_hni
ENSBTAG00000003239	UTP20	96	54.108	ENSORLG00015002843	utp20	99	54.414	Oryzias_latipes_hsok
ENSBTAG00000003239	UTP20	98	54.168	ENSOMEG00000023583	utp20	99	54.416	Oryzias_melastigma
ENSBTAG00000003239	UTP20	100	86.919	ENSOGAG00000015130	UTP20	100	86.919	Otolemur_garnettii
ENSBTAG00000003239	UTP20	100	97.376	ENSOARG00000014722	UTP20	100	97.376	Ovis_aries
ENSBTAG00000003239	UTP20	100	89.238	ENSPPAG00000001381	UTP20	100	89.527	Pan_paniscus
ENSBTAG00000003239	UTP20	100	90.444	ENSPPRG00000001026	UTP20	100	90.551	Panthera_pardus
ENSBTAG00000003239	UTP20	100	90.372	ENSPTIG00000020972	UTP20	100	90.480	Panthera_tigris_altaica
ENSBTAG00000003239	UTP20	100	89.274	ENSPTRG00000005349	UTP20	100	89.310	Pan_troglodytes
ENSBTAG00000003239	UTP20	100	89.417	ENSPANG00000020388	UTP20	100	89.453	Papio_anubis
ENSBTAG00000003239	UTP20	100	56.773	ENSPKIG00000007196	utp20	99	56.779	Paramormyrops_kingsleyae
ENSBTAG00000003239	UTP20	94	71.055	ENSPSIG00000016689	UTP20	100	71.157	Pelodiscus_sinensis
ENSBTAG00000003239	UTP20	100	55.817	ENSPMGG00000004066	utp20	99	56.103	Periophthalmus_magnuspinnatus
ENSBTAG00000003239	UTP20	100	85.535	ENSPEMG00000024120	Utp20	100	85.571	Peromyscus_maniculatus_bairdii
ENSBTAG00000003239	UTP20	100	73.881	ENSPCIG00000009298	UTP20	100	73.881	Phascolarctos_cinereus
ENSBTAG00000003239	UTP20	92	54.112	ENSPFOG00000003312	utp20	100	54.535	Poecilia_formosa
ENSBTAG00000003239	UTP20	98	54.518	ENSPLAG00000012874	utp20	99	56.900	Poecilia_latipinna
ENSBTAG00000003239	UTP20	98	54.231	ENSPMEG00000005915	utp20	99	56.333	Poecilia_mexicana
ENSBTAG00000003239	UTP20	98	54.183	ENSPREG00000013285	utp20	99	54.271	Poecilia_reticulata
ENSBTAG00000003239	UTP20	88	89.373	ENSPPYG00000004871	UTP20	100	89.373	Pongo_abelii
ENSBTAG00000003239	UTP20	84	92.929	ENSPCAG00000012791	UTP20	85	92.929	Procavia_capensis
ENSBTAG00000003239	UTP20	96	89.128	ENSPCOG00000024948	UTP20	100	89.168	Propithecus_coquereli
ENSBTAG00000003239	UTP20	100	88.941	ENSPVAG00000008113	UTP20	100	88.941	Pteropus_vampyrus
ENSBTAG00000003239	UTP20	100	56.272	ENSPNYG00000011561	utp20	99	56.981	Pundamilia_nyererei
ENSBTAG00000003239	UTP20	99	58.790	ENSPNAG00000006176	utp20	98	58.790	Pygocentrus_nattereri
ENSBTAG00000003239	UTP20	100	85.136	ENSRNOG00000005823	Utp20	100	85.346	Rattus_norvegicus
ENSBTAG00000003239	UTP20	100	87.116	ENSRBIG00000025384	UTP20	100	87.433	Rhinopithecus_bieti
ENSBTAG00000003239	UTP20	100	89.060	ENSRROG00000041254	UTP20	100	89.383	Rhinopithecus_roxellana
ENSBTAG00000003239	UTP20	100	88.774	ENSSBOG00000035762	UTP20	100	89.096	Saimiri_boliviensis_boliviensis
ENSBTAG00000003239	UTP20	98	70.567	ENSSHAG00000002298	UTP20	99	70.629	Sarcophilus_harrisii
ENSBTAG00000003239	UTP20	100	59.678	ENSSFOG00015001674	utp20	100	59.943	Scleropages_formosus
ENSBTAG00000003239	UTP20	98	53.947	ENSSMAG00000016460	utp20	99	53.988	Scophthalmus_maximus
ENSBTAG00000003239	UTP20	100	57.757	ENSSDUG00000013730	utp20	99	57.848	Seriola_dumerili
ENSBTAG00000003239	UTP20	100	57.391	ENSSLDG00000012844	utp20	99	57.764	Seriola_lalandi_dorsalis
ENSBTAG00000003239	UTP20	63	100.000	ENSSARG00000002796	-	62	100.000	Sorex_araneus
ENSBTAG00000003239	UTP20	99	69.008	ENSSPUG00000004513	UTP20	99	69.042	Sphenodon_punctatus
ENSBTAG00000003239	UTP20	100	57.204	ENSSPAG00000014674	utp20	99	57.219	Stegastes_partitus
ENSBTAG00000003239	UTP20	100	92.559	ENSSSCG00000000869	UTP20	100	92.559	Sus_scrofa
ENSBTAG00000003239	UTP20	77	68.951	ENSTGUG00000009053	-	100	68.951	Taeniopygia_guttata
ENSBTAG00000003239	UTP20	99	57.082	ENSTRUG00000005849	utp20	99	57.148	Takifugu_rubripes
ENSBTAG00000003239	UTP20	100	54.445	ENSTNIG00000006921	utp20	100	55.082	Tetraodon_nigroviridis
ENSBTAG00000003239	UTP20	92	79.705	ENSTBEG00000011917	UTP20	92	81.952	Tupaia_belangeri
ENSBTAG00000003239	UTP20	97	92.703	ENSTTRG00000017195	UTP20	98	92.703	Tursiops_truncatus
ENSBTAG00000003239	UTP20	100	91.335	ENSUAMG00000016363	UTP20	100	91.335	Ursus_americanus
ENSBTAG00000003239	UTP20	100	90.655	ENSUMAG00000000077	UTP20	100	90.655	Ursus_maritimus
ENSBTAG00000003239	UTP20	90	92.702	ENSVPAG00000011620	UTP20	92	92.702	Vicugna_pacos
ENSBTAG00000003239	UTP20	100	90.266	ENSVVUG00000018110	UTP20	100	90.266	Vulpes_vulpes
ENSBTAG00000003239	UTP20	98	63.483	ENSXETG00000032346	UTP20	100	63.316	Xenopus_tropicalis
ENSBTAG00000003239	UTP20	98	53.835	ENSXMAG00000006503	utp20	99	54.045	Xiphophorus_maculatus