EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000003332 (Gene tree)
Gene ID: 531274
Gene Symbol: RPP40
Alias: -
Full Name: Bos taurus ribonuclease P/MRP subunit p40 (RPP40)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 9784 bases
Position: chr23:49546033-49555816
Accession: NM_001105402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000004325	Ribonuc_P_40	PF08584.11	1.7e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000004325	-	1440	-	ENSBTAP00000004325	363 (aa)	-	F1MZC3

Gene Model

Click here to download ENSBTAG00000003332's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000003332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000003332	RPP40	100	82.645	ENSG00000124787	RPP40	100	82.645	Homo_sapiens
ENSBTAG00000003332	RPP40	89	31.366	ENSAPOG00000008660	rpp40	92	31.366	Acanthochromis_polyacanthus
ENSBTAG00000003332	RPP40	100	87.879	ENSAMEG00000012938	RPP40	100	87.879	Ailuropoda_melanoleuca
ENSBTAG00000003332	RPP40	98	37.845	ENSACIG00000003617	rpp40	98	37.845	Amphilophus_citrinellus
ENSBTAG00000003332	RPP40	98	39.496	ENSAOCG00000011846	rpp40	99	39.496	Amphiprion_ocellaris
ENSBTAG00000003332	RPP40	98	39.496	ENSAPEG00000001322	rpp40	99	39.496	Amphiprion_percula
ENSBTAG00000003332	RPP40	98	39.612	ENSATEG00000006584	rpp40	99	39.612	Anabas_testudineus
ENSBTAG00000003332	RPP40	83	66.777	ENSAPLG00000005691	RPP40	99	66.777	Anas_platyrhynchos
ENSBTAG00000003332	RPP40	99	64.345	ENSACAG00000006550	RPP40	88	64.345	Anolis_carolinensis
ENSBTAG00000003332	RPP40	100	81.267	ENSANAG00000029246	RPP40	100	81.267	Aotus_nancymaae
ENSBTAG00000003332	RPP40	98	39.888	ENSACLG00000015883	rpp40	97	39.888	Astatotilapia_calliptera
ENSBTAG00000003332	RPP40	98	49.721	ENSAMXG00000001755	rpp40	99	49.721	Astyanax_mexicanus
ENSBTAG00000003332	RPP40	100	81.818	ENSCJAG00000021373	RPP40	100	81.818	Callithrix_jacchus
ENSBTAG00000003332	RPP40	100	87.328	ENSCAFG00000009435	RPP40	100	87.328	Canis_familiaris
ENSBTAG00000003332	RPP40	100	87.328	ENSCAFG00020013380	RPP40	100	87.328	Canis_lupus_dingo
ENSBTAG00000003332	RPP40	100	95.041	ENSCHIG00000016849	RPP40	100	95.041	Capra_hircus
ENSBTAG00000003332	RPP40	100	84.573	ENSTSYG00000032857	RPP40	100	84.573	Carlito_syrichta
ENSBTAG00000003332	RPP40	90	75.535	ENSCAPG00000004957	RPP40	98	75.535	Cavia_aperea
ENSBTAG00000003332	RPP40	100	82.920	ENSCPOG00000005855	RPP40	100	82.920	Cavia_porcellus
ENSBTAG00000003332	RPP40	100	81.818	ENSCCAG00000019809	RPP40	100	81.818	Cebus_capucinus
ENSBTAG00000003332	RPP40	100	82.369	ENSCATG00000038787	RPP40	100	82.369	Cercocebus_atys
ENSBTAG00000003332	RPP40	100	83.471	ENSCLAG00000003235	RPP40	100	83.471	Chinchilla_lanigera
ENSBTAG00000003332	RPP40	100	82.645	ENSCSAG00000007307	RPP40	100	82.645	Chlorocebus_sabaeus
ENSBTAG00000003332	RPP40	69	66.400	ENSCHOG00000005856	-	100	66.400	Choloepus_hoffmanni
ENSBTAG00000003332	RPP40	99	70.278	ENSCPBG00000009003	RPP40	99	70.278	Chrysemys_picta_bellii
ENSBTAG00000003332	RPP40	100	82.645	ENSCANG00000033965	RPP40	100	82.645	Colobus_angolensis_palliatus
ENSBTAG00000003332	RPP40	100	78.512	ENSCGRG00001018328	Rpp40	100	78.512	Cricetulus_griseus_chok1gshd
ENSBTAG00000003332	RPP40	100	78.512	ENSCGRG00000011344	Rpp40	100	78.512	Cricetulus_griseus_crigri
ENSBTAG00000003332	RPP40	98	36.798	ENSCSEG00000015006	-	98	36.798	Cynoglossus_semilaevis
ENSBTAG00000003332	RPP40	74	35.055	ENSCVAG00000012169	rpp40	100	35.055	Cyprinodon_variegatus
ENSBTAG00000003332	RPP40	99	50.975	ENSDARG00000017605	rpp40	99	50.975	Danio_rerio
ENSBTAG00000003332	RPP40	82	80.471	ENSDNOG00000048136	RPP40	99	80.471	Dasypus_novemcinctus
ENSBTAG00000003332	RPP40	100	80.992	ENSDORG00000029944	-	100	80.992	Dipodomys_ordii
ENSBTAG00000003332	RPP40	100	61.765	ENSDORG00000011196	-	100	61.765	Dipodomys_ordii
ENSBTAG00000003332	RPP40	100	66.391	ENSETEG00000007458	RPP40	100	66.391	Echinops_telfairi
ENSBTAG00000003332	RPP40	98	45.070	ENSEBUG00000000386	rpp40	99	45.070	Eptatretus_burgeri
ENSBTAG00000003332	RPP40	100	85.950	ENSEASG00005012116	RPP40	80	85.950	Equus_asinus_asinus
ENSBTAG00000003332	RPP40	100	86.226	ENSECAG00000017247	RPP40	80	86.226	Equus_caballus
ENSBTAG00000003332	RPP40	82	65.657	ENSEEUG00000012087	RPP40	100	65.657	Erinaceus_europaeus
ENSBTAG00000003332	RPP40	98	48.883	ENSELUG00000017004	rpp40	99	48.883	Esox_lucius
ENSBTAG00000003332	RPP40	100	87.603	ENSFCAG00000009249	RPP40	100	87.603	Felis_catus
ENSBTAG00000003332	RPP40	86	64.220	ENSFALG00000013166	RPP40	100	64.220	Ficedula_albicollis
ENSBTAG00000003332	RPP40	100	84.298	ENSFDAG00000013001	-	100	84.298	Fukomys_damarensis
ENSBTAG00000003332	RPP40	80	68.836	ENSFDAG00000000265	-	99	68.836	Fukomys_damarensis
ENSBTAG00000003332	RPP40	98	41.457	ENSFHEG00000021429	rpp40	88	41.457	Fundulus_heteroclitus
ENSBTAG00000003332	RPP40	89	39.130	ENSGMOG00000018653	rpp40	100	39.130	Gadus_morhua
ENSBTAG00000003332	RPP40	99	63.611	ENSGALG00000036074	RPP40	99	63.611	Gallus_gallus
ENSBTAG00000003332	RPP40	83	34.551	ENSGAFG00000004189	-	99	34.551	Gambusia_affinis
ENSBTAG00000003332	RPP40	98	40.336	ENSGACG00000002472	rpp40	99	40.336	Gasterosteus_aculeatus
ENSBTAG00000003332	RPP40	99	71.111	ENSGAGG00000012918	RPP40	99	71.111	Gopherus_agassizii
ENSBTAG00000003332	RPP40	100	82.920	ENSGGOG00000013764	RPP40	100	82.920	Gorilla_gorilla
ENSBTAG00000003332	RPP40	90	39.697	ENSHBUG00000009378	rpp40	93	39.697	Haplochromis_burtoni
ENSBTAG00000003332	RPP40	100	85.124	ENSHGLG00000004871	RPP40	100	85.124	Heterocephalus_glaber_female
ENSBTAG00000003332	RPP40	100	85.399	ENSHGLG00100002080	RPP40	100	85.399	Heterocephalus_glaber_male
ENSBTAG00000003332	RPP40	95	33.046	ENSHCOG00000013264	-	92	33.046	Hippocampus_comes
ENSBTAG00000003332	RPP40	99	46.667	ENSIPUG00000008951	RPP40	99	46.667	Ictalurus_punctatus
ENSBTAG00000003332	RPP40	100	82.369	ENSSTOG00000011199	RPP40	100	82.369	Ictidomys_tridecemlineatus
ENSBTAG00000003332	RPP40	100	79.063	ENSJJAG00000020629	Rpp40	100	79.063	Jaculus_jaculus
ENSBTAG00000003332	RPP40	98	38.655	ENSKMAG00000019358	rpp40	99	38.655	Kryptolebias_marmoratus
ENSBTAG00000003332	RPP40	98	40.616	ENSLBEG00000022724	rpp40	99	40.616	Labrus_bergylta
ENSBTAG00000003332	RPP40	99	57.778	ENSLACG00000014848	RPP40	99	57.778	Latimeria_chalumnae
ENSBTAG00000003332	RPP40	100	53.168	ENSLOCG00000011650	rpp40	100	53.168	Lepisosteus_oculatus
ENSBTAG00000003332	RPP40	83	82.838	ENSLAFG00000007530	RPP40	100	82.838	Loxodonta_africana
ENSBTAG00000003332	RPP40	100	82.094	ENSMFAG00000043100	RPP40	100	82.094	Macaca_fascicularis
ENSBTAG00000003332	RPP40	100	82.369	ENSMMUG00000004966	RPP40	100	82.369	Macaca_mulatta
ENSBTAG00000003332	RPP40	100	82.369	ENSMNEG00000041986	RPP40	100	82.369	Macaca_nemestrina
ENSBTAG00000003332	RPP40	98	73.389	ENSMLEG00000040851	RPP40	100	77.273	Mandrillus_leucophaeus
ENSBTAG00000003332	RPP40	98	39.216	ENSMAMG00000019551	rpp40	98	39.216	Mastacembelus_armatus
ENSBTAG00000003332	RPP40	99	40.443	ENSMZEG00005019475	rpp40	99	40.443	Maylandia_zebra
ENSBTAG00000003332	RPP40	99	61.389	ENSMGAG00000004009	RPP40	99	61.389	Meleagris_gallopavo
ENSBTAG00000003332	RPP40	100	83.196	ENSMAUG00000010268	Rpp40	100	83.196	Mesocricetus_auratus
ENSBTAG00000003332	RPP40	100	83.747	ENSMICG00000003297	RPP40	100	77.686	Microcebus_murinus
ENSBTAG00000003332	RPP40	100	81.818	ENSMOCG00000000305	Rpp40	100	81.818	Microtus_ochrogaster
ENSBTAG00000003332	RPP40	98	35.014	ENSMMOG00000020591	-	99	35.014	Mola_mola
ENSBTAG00000003332	RPP40	100	77.747	ENSMODG00000009826	RPP40	100	77.747	Monodelphis_domestica
ENSBTAG00000003332	RPP40	98	38.655	ENSMALG00000020133	rpp40	99	38.655	Monopterus_albus
ENSBTAG00000003332	RPP40	100	83.196	MGP_CAROLIEiJ_G0018429	Rpp40	100	83.196	Mus_caroli
ENSBTAG00000003332	RPP40	100	84.298	ENSMUSG00000021418	Rpp40	100	84.298	Mus_musculus
ENSBTAG00000003332	RPP40	100	83.196	MGP_PahariEiJ_G0019497	Rpp40	100	83.196	Mus_pahari
ENSBTAG00000003332	RPP40	100	83.747	MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	Mus_spretus
ENSBTAG00000003332	RPP40	100	86.226	ENSMPUG00000000530	RPP40	93	86.226	Mustela_putorius_furo
ENSBTAG00000003332	RPP40	100	84.573	ENSMLUG00000000501	RPP40	100	84.573	Myotis_lucifugus
ENSBTAG00000003332	RPP40	100	82.920	ENSNGAG00000023955	-	100	82.920	Nannospalax_galili
ENSBTAG00000003332	RPP40	95	73.988	ENSNGAG00000022529	-	100	73.988	Nannospalax_galili
ENSBTAG00000003332	RPP40	88	36.223	ENSNBRG00000017465	rpp40	86	36.391	Neolamprologus_brichardi
ENSBTAG00000003332	RPP40	100	82.094	ENSNLEG00000034397	RPP40	100	82.094	Nomascus_leucogenys
ENSBTAG00000003332	RPP40	100	71.901	ENSMEUG00000005300	RPP40	100	71.901	Notamacropus_eugenii
ENSBTAG00000003332	RPP40	89	74.845	ENSODEG00000006170	-	100	74.845	Octodon_degus
ENSBTAG00000003332	RPP40	100	77.961	ENSODEG00000018153	-	100	77.961	Octodon_degus
ENSBTAG00000003332	RPP40	100	82.369	ENSODEG00000007255	-	100	82.369	Octodon_degus
ENSBTAG00000003332	RPP40	99	39.612	ENSONIG00000014016	rpp40	99	39.612	Oreochromis_niloticus
ENSBTAG00000003332	RPP40	83	73.754	ENSOANG00000001200	RPP40	99	73.754	Ornithorhynchus_anatinus
ENSBTAG00000003332	RPP40	99	73.961	ENSOCUG00000000354	RPP40	99	73.961	Oryctolagus_cuniculus
ENSBTAG00000003332	RPP40	99	38.056	ENSORLG00000008242	-	100	38.056	Oryzias_latipes
ENSBTAG00000003332	RPP40	99	37.778	ENSORLG00020013745	-	91	37.778	Oryzias_latipes_hni
ENSBTAG00000003332	RPP40	99	38.333	ENSORLG00015000887	-	100	38.333	Oryzias_latipes_hsok
ENSBTAG00000003332	RPP40	99	38.611	ENSOMEG00000002747	rpp40	100	38.611	Oryzias_melastigma
ENSBTAG00000003332	RPP40	100	83.747	ENSOGAG00000006055	RPP40	100	83.747	Otolemur_garnettii
ENSBTAG00000003332	RPP40	91	92.814	ENSOARG00000018783	RPP40	100	95.380	Ovis_aries
ENSBTAG00000003332	RPP40	100	82.369	ENSPPAG00000023703	RPP40	100	82.369	Pan_paniscus
ENSBTAG00000003332	RPP40	100	87.328	ENSPPRG00000005612	RPP40	100	87.328	Panthera_pardus
ENSBTAG00000003332	RPP40	100	80.441	ENSPTIG00000018847	RPP40	100	80.441	Panthera_tigris_altaica
ENSBTAG00000003332	RPP40	100	82.645	ENSPTRG00000017690	RPP40	100	82.645	Pan_troglodytes
ENSBTAG00000003332	RPP40	100	82.369	ENSPANG00000017865	RPP40	100	82.369	Papio_anubis
ENSBTAG00000003332	RPP40	99	52.089	ENSPKIG00000006311	rpp40	99	52.089	Paramormyrops_kingsleyae
ENSBTAG00000003332	RPP40	61	68.468	ENSPSIG00000007854	RPP40	100	68.468	Pelodiscus_sinensis
ENSBTAG00000003332	RPP40	93	72.107	ENSPEMG00000020809	Rpp40	91	72.107	Peromyscus_maniculatus_bairdii
ENSBTAG00000003332	RPP40	75	46.715	ENSPMAG00000008412	rpp40	99	46.715	Petromyzon_marinus
ENSBTAG00000003332	RPP40	100	79.063	ENSPCIG00000010682	RPP40	100	79.063	Phascolarctos_cinereus
ENSBTAG00000003332	RPP40	98	37.883	ENSPFOG00000011460	rpp40	98	37.883	Poecilia_formosa
ENSBTAG00000003332	RPP40	98	38.095	ENSPLAG00000001334	rpp40	99	38.095	Poecilia_latipinna
ENSBTAG00000003332	RPP40	98	38.375	ENSPMEG00000007721	rpp40	99	38.375	Poecilia_mexicana
ENSBTAG00000003332	RPP40	98	39.216	ENSPREG00000009215	rpp40	99	39.216	Poecilia_reticulata
ENSBTAG00000003332	RPP40	100	82.645	ENSPPYG00000016194	RPP40	100	82.645	Pongo_abelii
ENSBTAG00000003332	RPP40	51	86.413	ENSPCAG00000002700	-	99	86.413	Procavia_capensis
ENSBTAG00000003332	RPP40	100	84.298	ENSPCOG00000003907	RPP40	100	84.298	Propithecus_coquereli
ENSBTAG00000003332	RPP40	100	85.399	ENSPVAG00000011325	RPP40	100	85.399	Pteropus_vampyrus
ENSBTAG00000003332	RPP40	83	40.397	ENSPNYG00000004432	rpp40	99	40.397	Pundamilia_nyererei
ENSBTAG00000003332	RPP40	98	46.648	ENSPNAG00000019125	rpp40	99	46.648	Pygocentrus_nattereri
ENSBTAG00000003332	RPP40	100	83.196	ENSRNOG00000016226	Rpp40	100	83.196	Rattus_norvegicus
ENSBTAG00000003332	RPP40	100	82.645	ENSRBIG00000035800	RPP40	100	82.645	Rhinopithecus_bieti
ENSBTAG00000003332	RPP40	100	82.645	ENSRROG00000039116	RPP40	100	82.645	Rhinopithecus_roxellana
ENSBTAG00000003332	RPP40	100	81.818	ENSSBOG00000020297	RPP40	100	81.818	Saimiri_boliviensis_boliviensis
ENSBTAG00000003332	RPP40	77	76.259	ENSSHAG00000002102	RPP40	100	76.259	Sarcophilus_harrisii
ENSBTAG00000003332	RPP40	99	50.413	ENSSFOG00015001142	rpp40	81	50.413	Scleropages_formosus
ENSBTAG00000003332	RPP40	98	39.216	ENSSDUG00000007202	rpp40	99	39.216	Seriola_dumerili
ENSBTAG00000003332	RPP40	98	38.936	ENSSLDG00000017563	rpp40	99	38.936	Seriola_lalandi_dorsalis
ENSBTAG00000003332	RPP40	81	66.441	ENSSPUG00000018950	-	100	66.441	Sphenodon_punctatus
ENSBTAG00000003332	RPP40	99	68.056	ENSSPUG00000017487	-	99	68.056	Sphenodon_punctatus
ENSBTAG00000003332	RPP40	98	39.496	ENSSPAG00000022716	rpp40	99	39.496	Stegastes_partitus
ENSBTAG00000003332	RPP40	100	85.950	ENSSSCG00000000998	RPP40	100	85.950	Sus_scrofa
ENSBTAG00000003332	RPP40	99	65.642	ENSTGUG00000002258	-	100	65.642	Taeniopygia_guttata
ENSBTAG00000003332	RPP40	97	40.793	ENSTRUG00000003755	rpp40	98	40.793	Takifugu_rubripes
ENSBTAG00000003332	RPP40	97	39.943	ENSTNIG00000003077	rpp40	98	39.943	Tetraodon_nigroviridis
ENSBTAG00000003332	RPP40	69	58.000	ENSTBEG00000014467	-	73	58.000	Tupaia_belangeri
ENSBTAG00000003332	RPP40	99	81.768	ENSTTRG00000007319	RPP40	100	81.768	Tursiops_truncatus
ENSBTAG00000003332	RPP40	100	88.154	ENSUAMG00000002159	RPP40	100	88.154	Ursus_americanus
ENSBTAG00000003332	RPP40	100	88.154	ENSUMAG00000018639	RPP40	94	88.154	Ursus_maritimus
ENSBTAG00000003332	RPP40	81	63.605	ENSVPAG00000004652	-	99	63.605	Vicugna_pacos
ENSBTAG00000003332	RPP40	100	87.052	ENSVVUG00000005451	RPP40	100	87.052	Vulpes_vulpes
ENSBTAG00000003332	RPP40	99	54.521	ENSXETG00000017617	rpp40	100	54.521	Xenopus_tropicalis
ENSBTAG00000003332	RPP40	94	30.028	ENSXCOG00000019991	-	87	32.295	Xiphophorus_couchianus
ENSBTAG00000003332	RPP40	98	32.320	ENSXMAG00000024940	rpp40	98	32.320	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004526	ribonuclease P activity	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process