EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000003547 (Gene tree)
Gene ID: 282588
Gene Symbol: CSTF2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 35303 bases
Position: chrX:51346938-51382240
Accession: 27781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000004619	RRM_1	PF00076.22	2.1e-25	1	1
ENSBTAP00000042892	RRM_1	PF00076.22	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000045511	-	4707	-	ENSBTAP00000042892	592 (aa)	-	F1MVI1
ENSBTAT00000004619	-	2729	-	ENSBTAP00000004619	572 (aa)	-	Q8HXM1

Gene Model

Click here to download ENSBTAG00000003547's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000003547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000003547	CSTF2	99	67.341	ENSBTAG00000018406	CSTF2T	99	73.218

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000003547	CSTF2	100	95.147	ENSG00000101811	CSTF2	100	95.147	Homo_sapiens
ENSBTAG00000003547	CSTF2	99	58.236	ENSAPOG00000005630	cstf2	97	60.136	Acanthochromis_polyacanthus
ENSBTAG00000003547	CSTF2	100	95.199	ENSAMEG00000002082	CSTF2	100	95.199	Ailuropoda_melanoleuca
ENSBTAG00000003547	CSTF2	84	82.645	ENSACIG00000012852	cstf2	96	58.478	Amphilophus_citrinellus
ENSBTAG00000003547	CSTF2	99	58.763	ENSAOCG00000020905	cstf2	97	60.136	Amphiprion_ocellaris
ENSBTAG00000003547	CSTF2	99	58.763	ENSAPEG00000006526	cstf2	97	60.136	Amphiprion_percula
ENSBTAG00000003547	CSTF2	87	80.247	ENSATEG00000018186	cstf2	96	58.793	Anabas_testudineus
ENSBTAG00000003547	CSTF2	97	78.082	ENSAPLG00000007255	CSTF2	98	77.797	Anas_platyrhynchos
ENSBTAG00000003547	CSTF2	100	94.472	ENSANAG00000022342	CSTF2	100	94.472	Aotus_nancymaae
ENSBTAG00000003547	CSTF2	65	82.645	ENSACLG00000000779	cstf2	93	61.140	Astatotilapia_calliptera
ENSBTAG00000003547	CSTF2	72	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSBTAG00000003547	CSTF2	100	95.101	ENSCJAG00000004422	CSTF2	100	95.286	Callithrix_jacchus
ENSBTAG00000003547	CSTF2	100	96.360	ENSCAFG00000017551	CSTF2	100	96.360	Canis_familiaris
ENSBTAG00000003547	CSTF2	100	96.147	ENSCAFG00020007619	CSTF2	100	96.147	Canis_lupus_dingo
ENSBTAG00000003547	CSTF2	100	99.662	ENSCHIG00000016994	CSTF2	100	99.662	Capra_hircus
ENSBTAG00000003547	CSTF2	100	95.608	ENSTSYG00000006529	CSTF2	100	95.608	Carlito_syrichta
ENSBTAG00000003547	CSTF2	100	93.068	ENSCPOG00000015255	CSTF2	100	93.068	Cavia_porcellus
ENSBTAG00000003547	CSTF2	100	95.101	ENSCCAG00000032975	CSTF2	100	95.101	Cebus_capucinus
ENSBTAG00000003547	CSTF2	100	95.804	ENSCATG00000022835	CSTF2	100	95.804	Cercocebus_atys
ENSBTAG00000003547	CSTF2	100	93.241	ENSCLAG00000001904	CSTF2	100	93.241	Chinchilla_lanigera
ENSBTAG00000003547	CSTF2	100	94.975	ENSCSAG00000010360	CSTF2	100	94.975	Chlorocebus_sabaeus
ENSBTAG00000003547	CSTF2	68	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSBTAG00000003547	CSTF2	100	75.441	ENSCPBG00000014293	CSTF2	100	75.199	Chrysemys_picta_bellii
ENSBTAG00000003547	CSTF2	100	95.979	ENSCANG00000030612	CSTF2	100	95.979	Colobus_angolensis_palliatus
ENSBTAG00000003547	CSTF2	100	90.345	ENSCGRG00001023023	Cstf2	100	90.345	Cricetulus_griseus_chok1gshd
ENSBTAG00000003547	CSTF2	100	87.652	ENSCGRG00000003897	Cstf2	100	87.652	Cricetulus_griseus_crigri
ENSBTAG00000003547	CSTF2	87	82.988	ENSCVAG00000005731	cstf2	96	61.257	Cyprinodon_variegatus
ENSBTAG00000003547	CSTF2	75	98.182	ENSDARG00000090788	cstf2	97	92.188	Danio_rerio
ENSBTAG00000003547	CSTF2	100	90.592	ENSDORG00000007195	Cstf2	100	90.592	Dipodomys_ordii
ENSBTAG00000003547	CSTF2	74	94.595	ENSETEG00000004931	CSTF2	68	94.595	Echinops_telfairi
ENSBTAG00000003547	CSTF2	100	95.645	ENSEASG00005001216	CSTF2	100	95.645	Equus_asinus_asinus
ENSBTAG00000003547	CSTF2	100	95.841	ENSECAG00000009325	CSTF2	100	95.841	Equus_caballus
ENSBTAG00000003547	CSTF2	100	96.707	ENSFCAG00000007000	CSTF2	100	96.707	Felis_catus
ENSBTAG00000003547	CSTF2	92	76.814	ENSFALG00000003859	CSTF2	100	77.168	Ficedula_albicollis
ENSBTAG00000003547	CSTF2	100	93.588	ENSFDAG00000002416	CSTF2	100	93.588	Fukomys_damarensis
ENSBTAG00000003547	CSTF2	84	81.328	ENSFHEG00000017065	cstf2	93	60.832	Fundulus_heteroclitus
ENSBTAG00000003547	CSTF2	99	53.646	ENSGMOG00000005145	cstf2	99	57.712	Gadus_morhua
ENSBTAG00000003547	CSTF2	100	78.830	ENSGALG00000006760	CSTF2	100	79.174	Gallus_gallus
ENSBTAG00000003547	CSTF2	99	56.110	ENSGACG00000017326	cstf2	93	81.633	Gasterosteus_aculeatus
ENSBTAG00000003547	CSTF2	100	77.430	ENSGAGG00000006037	CSTF2	100	78.418	Gopherus_agassizii
ENSBTAG00000003547	CSTF2	100	95.979	ENSGGOG00000022267	CSTF2	100	95.979	Gorilla_gorilla
ENSBTAG00000003547	CSTF2	65	81.707	ENSHBUG00000016183	cstf2	93	60.997	Haplochromis_burtoni
ENSBTAG00000003547	CSTF2	100	93.414	ENSHGLG00000000659	-	100	93.414	Heterocephalus_glaber_female
ENSBTAG00000003547	CSTF2	100	79.545	ENSHGLG00000013455	-	100	79.545	Heterocephalus_glaber_female
ENSBTAG00000003547	CSTF2	100	79.720	ENSHGLG00100015391	-	100	79.720	Heterocephalus_glaber_male
ENSBTAG00000003547	CSTF2	100	93.414	ENSHGLG00100001130	-	100	93.414	Heterocephalus_glaber_male
ENSBTAG00000003547	CSTF2	99	59.897	ENSHCOG00000005157	cstf2	97	60.622	Hippocampus_comes
ENSBTAG00000003547	CSTF2	73	69.351	ENSIPUG00000017839	cstf2	99	60.399	Ictalurus_punctatus
ENSBTAG00000003547	CSTF2	100	93.761	ENSSTOG00000023445	CSTF2	100	93.761	Ictidomys_tridecemlineatus
ENSBTAG00000003547	CSTF2	100	92.028	ENSJJAG00000020507	Cstf2	100	92.028	Jaculus_jaculus
ENSBTAG00000003547	CSTF2	84	80.000	ENSKMAG00000001068	cstf2	96	59.790	Kryptolebias_marmoratus
ENSBTAG00000003547	CSTF2	53	94.915	ENSLBEG00000028720	cstf2	82	94.915	Labrus_bergylta
ENSBTAG00000003547	CSTF2	99	68.040	ENSLACG00000015927	CSTF2	99	68.040	Latimeria_chalumnae
ENSBTAG00000003547	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	65.862	Lepisosteus_oculatus
ENSBTAG00000003547	CSTF2	100	92.374	ENSLAFG00000000474	CSTF2	100	92.374	Loxodonta_africana
ENSBTAG00000003547	CSTF2	100	95.979	ENSMFAG00000043888	CSTF2	100	95.979	Macaca_fascicularis
ENSBTAG00000003547	CSTF2	100	95.777	ENSMMUG00000013008	CSTF2	100	95.777	Macaca_mulatta
ENSBTAG00000003547	CSTF2	100	95.777	ENSMNEG00000041824	CSTF2	100	95.777	Macaca_nemestrina
ENSBTAG00000003547	CSTF2	100	95.979	ENSMLEG00000036870	CSTF2	100	95.979	Mandrillus_leucophaeus
ENSBTAG00000003547	CSTF2	82	79.828	ENSMAMG00000020364	cstf2	96	59.331	Mastacembelus_armatus
ENSBTAG00000003547	CSTF2	65	82.645	ENSMZEG00005007200	cstf2	96	61.140	Maylandia_zebra
ENSBTAG00000003547	CSTF2	93	68.289	ENSMGAG00000004139	CSTF2	100	81.673	Meleagris_gallopavo
ENSBTAG00000003547	CSTF2	100	90.517	ENSMAUG00000000965	Cstf2	100	90.517	Mesocricetus_auratus
ENSBTAG00000003547	CSTF2	100	93.706	ENSMICG00000014121	CSTF2	100	93.706	Microcebus_murinus
ENSBTAG00000003547	CSTF2	100	90.957	ENSMOCG00000008081	Cstf2	100	90.957	Microtus_ochrogaster
ENSBTAG00000003547	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	96	54.861	Mola_mola
ENSBTAG00000003547	CSTF2	100	80.233	ENSMODG00000011785	CSTF2	100	82.529	Monodelphis_domestica
ENSBTAG00000003547	CSTF2	100	90.690	MGP_CAROLIEiJ_G0033383	Cstf2	100	90.690	Mus_caroli
ENSBTAG00000003547	CSTF2	100	90.690	ENSMUSG00000031256	Cstf2	100	90.690	Mus_musculus
ENSBTAG00000003547	CSTF2	100	90.674	MGP_PahariEiJ_G0031923	Cstf2	100	90.846	Mus_pahari
ENSBTAG00000003547	CSTF2	100	90.690	MGP_SPRETEiJ_G0034548	Cstf2	100	90.690	Mus_spretus
ENSBTAG00000003547	CSTF2	100	90.794	ENSMPUG00000002339	CSTF2	100	90.794	Mustela_putorius_furo
ENSBTAG00000003547	CSTF2	100	88.553	ENSMLUG00000004598	CSTF2	98	88.553	Myotis_lucifugus
ENSBTAG00000003547	CSTF2	100	92.228	ENSNGAG00000021985	Cstf2	100	92.401	Nannospalax_galili
ENSBTAG00000003547	CSTF2	93	63.391	ENSNBRG00000021694	cstf2	100	56.838	Neolamprologus_brichardi
ENSBTAG00000003547	CSTF2	100	95.979	ENSNLEG00000007510	CSTF2	100	95.979	Nomascus_leucogenys
ENSBTAG00000003547	CSTF2	100	78.497	ENSMEUG00000007875	-	100	79.545	Notamacropus_eugenii
ENSBTAG00000003547	CSTF2	91	79.655	ENSMEUG00000014025	-	100	81.190	Notamacropus_eugenii
ENSBTAG00000003547	CSTF2	100	81.993	ENSMEUG00000011186	-	100	84.091	Notamacropus_eugenii
ENSBTAG00000003547	CSTF2	87	80.543	ENSOPRG00000003106	CSTF2	89	80.769	Ochotona_princeps
ENSBTAG00000003547	CSTF2	100	92.548	ENSODEG00000002059	CSTF2	100	92.548	Octodon_degus
ENSBTAG00000003547	CSTF2	99	56.201	ENSONIG00000002631	cstf2	99	58.216	Oreochromis_niloticus
ENSBTAG00000003547	CSTF2	97	77.178	ENSOANG00000004208	CSTF2	87	84.810	Ornithorhynchus_anatinus
ENSBTAG00000003547	CSTF2	100	92.548	ENSOCUG00000010468	CSTF2	100	92.548	Oryctolagus_cuniculus
ENSBTAG00000003547	CSTF2	86	80.498	ENSORLG00000001380	cstf2	97	59.380	Oryzias_latipes
ENSBTAG00000003547	CSTF2	83	80.498	ENSORLG00020021917	cstf2	97	59.380	Oryzias_latipes_hni
ENSBTAG00000003547	CSTF2	86	80.498	ENSORLG00015011996	cstf2	97	59.380	Oryzias_latipes_hsok
ENSBTAG00000003547	CSTF2	83	80.498	ENSOMEG00000015507	cstf2	97	60.241	Oryzias_melastigma
ENSBTAG00000003547	CSTF2	100	88.871	ENSOGAG00000011192	CSTF2	100	88.871	Otolemur_garnettii
ENSBTAG00000003547	CSTF2	100	99.650	ENSOARG00000001022	CSTF2	100	99.650	Ovis_aries
ENSBTAG00000003547	CSTF2	100	95.979	ENSPPAG00000031804	CSTF2	100	95.979	Pan_paniscus
ENSBTAG00000003547	CSTF2	100	96.707	ENSPPRG00000022492	CSTF2	100	96.707	Panthera_pardus
ENSBTAG00000003547	CSTF2	100	96.360	ENSPTIG00000009922	CSTF2	100	96.360	Panthera_tigris_altaica
ENSBTAG00000003547	CSTF2	100	95.979	ENSPTRG00000022090	CSTF2	100	95.979	Pan_troglodytes
ENSBTAG00000003547	CSTF2	100	95.979	ENSPANG00000002303	CSTF2	100	95.979	Papio_anubis
ENSBTAG00000003547	CSTF2	99	63.002	ENSPKIG00000005033	cstf2	97	61.821	Paramormyrops_kingsleyae
ENSBTAG00000003547	CSTF2	84	81.328	ENSPMGG00000006534	cstf2	97	59.966	Periophthalmus_magnuspinnatus
ENSBTAG00000003547	CSTF2	100	89.828	ENSPEMG00000019415	Cstf2	100	89.828	Peromyscus_maniculatus_bairdii
ENSBTAG00000003547	CSTF2	100	81.291	ENSPCIG00000002989	CSTF2	100	82.285	Phascolarctos_cinereus
ENSBTAG00000003547	CSTF2	84	82.158	ENSPMEG00000017743	cstf2	96	57.770	Poecilia_mexicana
ENSBTAG00000003547	CSTF2	59	69.851	ENSPREG00000011481	cstf2	97	60.727	Poecilia_reticulata
ENSBTAG00000003547	CSTF2	100	95.142	ENSPPYG00000020541	CSTF2	100	95.142	Pongo_abelii
ENSBTAG00000003547	CSTF2	100	94.231	ENSPCOG00000027744	CSTF2	100	94.231	Propithecus_coquereli
ENSBTAG00000003547	CSTF2	97	80.790	ENSPVAG00000008342	CSTF2	100	80.790	Pteropus_vampyrus
ENSBTAG00000003547	CSTF2	99	61.391	ENSPNAG00000018887	cstf2	97	61.739	Pygocentrus_nattereri
ENSBTAG00000003547	CSTF2	100	91.130	ENSRNOG00000048025	Cstf2	100	91.130	Rattus_norvegicus
ENSBTAG00000003547	CSTF2	100	94.406	ENSRBIG00000030745	CSTF2	100	94.406	Rhinopithecus_bieti
ENSBTAG00000003547	CSTF2	100	95.979	ENSRROG00000045042	CSTF2	100	95.979	Rhinopithecus_roxellana
ENSBTAG00000003547	CSTF2	100	95.101	ENSSBOG00000021649	CSTF2	100	95.101	Saimiri_boliviensis_boliviensis
ENSBTAG00000003547	CSTF2	95	100.000	ENSSHAG00000003681	CSTF2	92	83.333	Sarcophilus_harrisii
ENSBTAG00000003547	CSTF2	99	63.855	ENSSFOG00015006348	cstf2	98	63.727	Scleropages_formosus
ENSBTAG00000003547	CSTF2	86	82.988	ENSSMAG00000013463	cstf2	96	60.485	Scophthalmus_maximus
ENSBTAG00000003547	CSTF2	100	63.170	ENSSPUG00000005288	-	97	79.025	Sphenodon_punctatus
ENSBTAG00000003547	CSTF2	100	97.203	ENSSSCG00000012486	CSTF2	100	98.316	Sus_scrofa
ENSBTAG00000003547	CSTF2	100	79.082	ENSTGUG00000002253	CSTF2	100	79.422	Taeniopygia_guttata
ENSBTAG00000003547	CSTF2	99	60.413	ENSTNIG00000016860	cstf2	99	60.959	Tetraodon_nigroviridis
ENSBTAG00000003547	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSBTAG00000003547	CSTF2	100	97.747	ENSTTRG00000013556	CSTF2	100	97.747	Tursiops_truncatus
ENSBTAG00000003547	CSTF2	100	95.876	ENSUAMG00000026605	CSTF2	100	95.876	Ursus_americanus
ENSBTAG00000003547	CSTF2	100	90.210	ENSUMAG00000012417	CSTF2	100	99.291	Ursus_maritimus
ENSBTAG00000003547	CSTF2	73	97.668	ENSVPAG00000006466	CSTF2	72	97.668	Vicugna_pacos
ENSBTAG00000003547	CSTF2	100	96.534	ENSVVUG00000004717	CSTF2	100	96.534	Vulpes_vulpes
ENSBTAG00000003547	CSTF2	83	87.143	ENSXETG00000009642	cstf2	100	65.862	Xenopus_tropicalis
ENSBTAG00000003547	CSTF2	79	85.238	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	-	ISS	Component
GO:0006378	mRNA polyadenylation	-	IEA	Process
GO:0071920	cleavage body	-	ISS	Component