EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000003801 (Gene tree)
Gene ID: 540558
Gene Symbol: MBD1
Alias: -
Full Name: Bos taurus cilia and flagella associated protein 53 (CFAP53)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 61249 bases
Position: chr24:49855041-49916289
Accession: NM_001304576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000074393	MBD	PF01429.19	1.8e-16	1	1
ENSBTAP00000058993	MBD	PF01429.19	1.8e-16	1	1
ENSBTAP00000059543	MBD	PF01429.19	1.9e-16	1	1
ENSBTAP00000060840	MBD	PF01429.19	1.9e-16	1	1
ENSBTAP00000004954	MBD	PF01429.19	2e-16	1	1
ENSBTAP00000071943	MBD	PF01429.19	4.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000003444	-	3415	-	ENSBTAP00000003444	514 (aa)	-	F1N7G5
ENSBTAT00000079863	-	2921	-	ENSBTAP00000060840	631 (aa)	XP_005224310	UPI000383B3B2
ENSBTAT00000004954	-	2508	-	ENSBTAP00000004954	657 (aa)	-	Q2KIY8
ENSBTAT00000080810	-	2475	-	ENSBTAP00000071943	646 (aa)	-	-
ENSBTAT00000086116	-	2325	-	ENSBTAP00000074393	596 (aa)	-	-
ENSBTAT00000080029	-	2846	-	ENSBTAP00000058993	606 (aa)	XP_005224314	UPI00005BFDB1
ENSBTAT00000080481	-	2439	-	ENSBTAP00000059543	634 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000003801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000003801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000003801	MBD1	100	86.529	ENSG00000141644	MBD1	99	92.466	Homo_sapiens
ENSBTAG00000003801	MBD1	63	36.318	ENSAPOG00000012810	mbd1b	51	36.548	Acanthochromis_polyacanthus
ENSBTAG00000003801	MBD1	100	89.082	ENSAMEG00000000238	MBD1	96	89.557	Ailuropoda_melanoleuca
ENSBTAG00000003801	MBD1	63	36.139	ENSAOCG00000020272	mbd1b	51	36.224	Amphiprion_ocellaris
ENSBTAG00000003801	MBD1	63	36.139	ENSAPEG00000023230	mbd1b	51	36.224	Amphiprion_percula
ENSBTAG00000003801	MBD1	70	30.040	ENSATEG00000009608	mbd1b	52	34.450	Anabas_testudineus
ENSBTAG00000003801	MBD1	68	43.341	ENSACAG00000006091	-	100	43.584	Anolis_carolinensis
ENSBTAG00000003801	MBD1	100	86.212	ENSANAG00000036253	MBD1	100	86.054	Aotus_nancymaae
ENSBTAG00000003801	MBD1	60	36.782	ENSACLG00000021383	mbd1b	50	37.129	Astatotilapia_calliptera
ENSBTAG00000003801	MBD1	100	84.292	ENSCJAG00000004959	MBD1	100	84.137	Callithrix_jacchus
ENSBTAG00000003801	MBD1	100	88.133	ENSCAFG00000018928	MBD1	96	88.766	Canis_familiaris
ENSBTAG00000003801	MBD1	99	87.500	ENSCAFG00020024272	MBD1	98	87.599	Canis_lupus_dingo
ENSBTAG00000003801	MBD1	100	98.415	ENSCHIG00000021134	MBD1	100	98.415	Capra_hircus
ENSBTAG00000003801	MBD1	100	85.737	ENSTSYG00000000509	MBD1	100	85.578	Carlito_syrichta
ENSBTAG00000003801	MBD1	99	62.292	ENSCAPG00000015782	MBD1	96	67.790	Cavia_aperea
ENSBTAG00000003801	MBD1	100	72.317	ENSCPOG00000001671	MBD1	100	69.518	Cavia_porcellus
ENSBTAG00000003801	MBD1	100	84.304	ENSCCAG00000034600	MBD1	91	90.461	Cebus_capucinus
ENSBTAG00000003801	MBD1	100	86.688	ENSCATG00000029959	MBD1	100	86.529	Cercocebus_atys
ENSBTAG00000003801	MBD1	100	83.518	ENSCLAG00000007457	MBD1	89	83.518	Chinchilla_lanigera
ENSBTAG00000003801	MBD1	100	86.634	ENSCSAG00000018070	MBD1	100	86.469	Chlorocebus_sabaeus
ENSBTAG00000003801	MBD1	100	86.688	ENSCANG00000033425	MBD1	100	86.529	Colobus_angolensis_palliatus
ENSBTAG00000003801	MBD1	100	72.787	ENSCGRG00001014843	Mbd1	100	72.295	Cricetulus_griseus_chok1gshd
ENSBTAG00000003801	MBD1	100	50.734	ENSCGRG00000014135	Mbd1	100	65.957	Cricetulus_griseus_crigri
ENSBTAG00000003801	MBD1	100	80.854	ENSDNOG00000015998	MBD1	100	82.965	Dasypus_novemcinctus
ENSBTAG00000003801	MBD1	90	78.419	ENSDORG00000013917	Mbd1	97	77.508	Dipodomys_ordii
ENSBTAG00000003801	MBD1	100	90.348	ENSEASG00005003857	MBD1	100	90.348	Equus_asinus_asinus
ENSBTAG00000003801	MBD1	100	89.786	ENSECAG00000011497	MBD1	82	89.362	Equus_caballus
ENSBTAG00000003801	MBD1	100	89.241	ENSFCAG00000015730	MBD1	100	89.715	Felis_catus
ENSBTAG00000003801	MBD1	99	69.745	ENSFDAG00000011085	MBD1	86	81.579	Fukomys_damarensis
ENSBTAG00000003801	MBD1	52	53.000	ENSFHEG00000020120	mbd1b	60	34.025	Fundulus_heteroclitus
ENSBTAG00000003801	MBD1	61	35.570	ENSGACG00000012106	-	70	30.000	Gasterosteus_aculeatus
ENSBTAG00000003801	MBD1	100	86.371	ENSGGOG00000016966	MBD1	100	86.212	Gorilla_gorilla
ENSBTAG00000003801	MBD1	60	36.416	ENSHBUG00000014270	mbd1b	50	36.634	Haplochromis_burtoni
ENSBTAG00000003801	MBD1	100	83.835	ENSHGLG00000008740	MBD1	100	83.835	Heterocephalus_glaber_female
ENSBTAG00000003801	MBD1	84	87.948	ENSHGLG00100005198	MBD1	100	88.487	Heterocephalus_glaber_male
ENSBTAG00000003801	MBD1	58	37.888	ENSIPUG00000015243	-	50	37.423	Ictalurus_punctatus
ENSBTAG00000003801	MBD1	100	80.844	ENSSTOG00000007780	MBD1	100	80.163	Ictidomys_tridecemlineatus
ENSBTAG00000003801	MBD1	98	66.833	ENSJJAG00000022859	Mbd1	100	63.945	Jaculus_jaculus
ENSBTAG00000003801	MBD1	73	32.301	ENSKMAG00000020760	mbd1b	61	32.218	Kryptolebias_marmoratus
ENSBTAG00000003801	MBD1	94	33.741	ENSLACG00000002414	-	52	62.500	Latimeria_chalumnae
ENSBTAG00000003801	MBD1	99	75.331	ENSLAFG00000031328	MBD1	100	72.699	Loxodonta_africana
ENSBTAG00000003801	MBD1	100	87.322	ENSMFAG00000026335	MBD1	100	86.529	Macaca_fascicularis
ENSBTAG00000003801	MBD1	100	87.322	ENSMMUG00000009050	MBD1	100	86.529	Macaca_mulatta
ENSBTAG00000003801	MBD1	100	87.322	ENSMNEG00000038822	MBD1	100	86.529	Macaca_nemestrina
ENSBTAG00000003801	MBD1	100	86.688	ENSMLEG00000043121	MBD1	100	86.529	Mandrillus_leucophaeus
ENSBTAG00000003801	MBD1	67	36.634	ENSMAMG00000023341	-	63	35.204	Mastacembelus_armatus
ENSBTAG00000003801	MBD1	60	36.782	ENSMZEG00005010421	mbd1b	50	37.129	Maylandia_zebra
ENSBTAG00000003801	MBD1	100	85.227	ENSMICG00000006414	MBD1	100	86.350	Microcebus_murinus
ENSBTAG00000003801	MBD1	69	41.531	ENSMODG00000001286	-	57	42.506	Monodelphis_domestica
ENSBTAG00000003801	MBD1	99	65.610	ENSMUSG00000024561	Mbd1	100	63.516	Mus_musculus
ENSBTAG00000003801	MBD1	100	65.665	MGP_PahariEiJ_G0019128	Mbd1	100	65.714	Mus_pahari
ENSBTAG00000003801	MBD1	98	67.044	MGP_SPRETEiJ_G0023304	Mbd1	99	66.451	Mus_spretus
ENSBTAG00000003801	MBD1	100	88.766	ENSMPUG00000008843	MBD1	96	89.241	Mustela_putorius_furo
ENSBTAG00000003801	MBD1	100	88.431	ENSMLUG00000008286	MBD1	96	88.273	Myotis_lucifugus
ENSBTAG00000003801	MBD1	98	66.063	ENSNGAG00000011412	Mbd1	100	62.974	Nannospalax_galili
ENSBTAG00000003801	MBD1	100	86.634	ENSNLEG00000011661	-	100	85.974	Nomascus_leucogenys
ENSBTAG00000003801	MBD1	98	68.297	ENSNLEG00000032711	-	86	74.013	Nomascus_leucogenys
ENSBTAG00000003801	MBD1	100	72.607	ENSOPRG00000007647	MBD1	100	72.607	Ochotona_princeps
ENSBTAG00000003801	MBD1	99	70.383	ENSODEG00000018451	MBD1	100	70.124	Octodon_degus
ENSBTAG00000003801	MBD1	60	36.782	ENSONIG00000020289	mbd1b	52	35.922	Oreochromis_niloticus
ENSBTAG00000003801	MBD1	85	47.858	ENSOANG00000014593	-	100	45.341	Ornithorhynchus_anatinus
ENSBTAG00000003801	MBD1	100	81.804	ENSOCUG00000006554	MBD1	100	81.962	Oryctolagus_cuniculus
ENSBTAG00000003801	MBD1	100	82.527	ENSOGAG00000003784	MBD1	96	81.719	Otolemur_garnettii
ENSBTAG00000003801	MBD1	100	98.101	ENSOARG00000004218	MBD1	95	98.101	Ovis_aries
ENSBTAG00000003801	MBD1	100	86.304	ENSPPAG00000038886	MBD1	100	86.139	Pan_paniscus
ENSBTAG00000003801	MBD1	100	89.399	ENSPPRG00000021387	MBD1	100	89.873	Panthera_pardus
ENSBTAG00000003801	MBD1	100	89.241	ENSPTIG00000021231	MBD1	100	89.715	Panthera_tigris_altaica
ENSBTAG00000003801	MBD1	100	86.371	ENSPTRG00000010021	MBD1	100	86.212	Pan_troglodytes
ENSBTAG00000003801	MBD1	100	86.529	ENSPANG00000010867	MBD1	100	86.371	Papio_anubis
ENSBTAG00000003801	MBD1	99	59.061	ENSPEMG00000022630	Mbd1	100	57.293	Peromyscus_maniculatus_bairdii
ENSBTAG00000003801	MBD1	96	47.438	ENSPCIG00000027937	-	79	47.627	Phascolarctos_cinereus
ENSBTAG00000003801	MBD1	71	53.846	ENSPMEG00000024145	mbd1b	50	58.333	Poecilia_mexicana
ENSBTAG00000003801	MBD1	100	86.469	ENSPPYG00000009158	MBD1	91	86.304	Pongo_abelii
ENSBTAG00000003801	MBD1	90	87.500	ENSPCAG00000001648	MBD1	93	87.500	Procavia_capensis
ENSBTAG00000003801	MBD1	100	87.644	ENSPCOG00000012450	MBD1	100	89.024	Propithecus_coquereli
ENSBTAG00000003801	MBD1	100	51.051	ENSRNOG00000024104	Mbd1	86	69.355	Rattus_norvegicus
ENSBTAG00000003801	MBD1	100	80.666	ENSRBIG00000041294	MBD1	100	80.507	Rhinopithecus_bieti
ENSBTAG00000003801	MBD1	100	86.846	ENSRROG00000032517	MBD1	100	86.688	Rhinopithecus_roxellana
ENSBTAG00000003801	MBD1	98	87.015	ENSSBOG00000027169	MBD1	91	89.803	Saimiri_boliviensis_boliviensis
ENSBTAG00000003801	MBD1	82	44.512	ENSSHAG00000003661	-	100	47.660	Sarcophilus_harrisii
ENSBTAG00000003801	MBD1	100	88.944	ENSSSCG00000004516	MBD1	100	88.614	Sus_scrofa
ENSBTAG00000003801	MBD1	70	33.613	ENSTRUG00000013422	mbd1b	61	33.333	Takifugu_rubripes
ENSBTAG00000003801	MBD1	57	100.000	ENSTBEG00000012651	-	61	100.000	Tupaia_belangeri
ENSBTAG00000003801	MBD1	100	88.303	ENSTTRG00000015523	MBD1	100	88.633	Tursiops_truncatus
ENSBTAG00000003801	MBD1	100	83.361	ENSUAMG00000004752	MBD1	96	89.112	Ursus_americanus
ENSBTAG00000003801	MBD1	100	88.468	ENSUMAG00000002947	MBD1	100	88.962	Ursus_maritimus