EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000003915 (Gene tree)
Gene ID: 787569
Gene Symbol: LARP6
Alias: -
Full Name: Bos taurus La ribonucleoprotein domain family member 6 (LARP6)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 22435 bases
Position: chr10:17679370-17701804
Accession: NM_001099205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000063042	La	PF05383.17	1.4e-20	1	1
ENSBTAP00000005109	La	PF05383.17	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000084463	-	1986	-	ENSBTAP00000063042	492 (aa)	-	A6H7E4
ENSBTAT00000005109	-	1439	-	ENSBTAP00000005109	462 (aa)	-	F1MBD0

Gene Model

Click here to download ENSBTAG00000003915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000003915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000003915	LARP6	100	92.683	ENSG00000166173	LARP6	100	100.000	Homo_sapiens
ENSBTAG00000003915	LARP6	95	58.058	ENSAPOG00000021773	larp6a	63	60.000	Acanthochromis_polyacanthus
ENSBTAG00000003915	LARP6	87	90.187	ENSAMEG00000008897	LARP6	100	90.187	Ailuropoda_melanoleuca
ENSBTAG00000003915	LARP6	95	58.678	ENSACIG00000005166	larp6a	86	60.000	Amphilophus_citrinellus
ENSBTAG00000003915	LARP6	95	58.058	ENSAOCG00000002284	larp6a	63	60.000	Amphiprion_ocellaris
ENSBTAG00000003915	LARP6	95	58.058	ENSAPEG00000008077	larp6a	84	60.000	Amphiprion_percula
ENSBTAG00000003915	LARP6	95	58.058	ENSATEG00000004018	larp6a	62	59.775	Anabas_testudineus
ENSBTAG00000003915	LARP6	85	69.267	ENSAPLG00000009914	LARP6	99	69.267	Anas_platyrhynchos
ENSBTAG00000003915	LARP6	84	67.548	ENSACAG00000008613	LARP6	98	67.548	Anolis_carolinensis
ENSBTAG00000003915	LARP6	100	92.683	ENSANAG00000024860	LARP6	100	92.683	Aotus_nancymaae
ENSBTAG00000003915	LARP6	95	58.471	ENSACLG00000018561	larp6a	61	59.775	Astatotilapia_calliptera
ENSBTAG00000003915	LARP6	97	56.112	ENSAMXG00000029387	larp6a	68	58.425	Astyanax_mexicanus
ENSBTAG00000003915	LARP6	83	42.512	ENSAMXG00000036816	-	93	41.546	Astyanax_mexicanus
ENSBTAG00000003915	LARP6	100	92.480	ENSCJAG00000018642	-	100	92.480	Callithrix_jacchus
ENSBTAG00000003915	LARP6	100	91.870	ENSCJAG00000046236	-	100	91.870	Callithrix_jacchus
ENSBTAG00000003915	LARP6	86	92.471	ENSCAFG00000017616	LARP6	99	92.471	Canis_familiaris
ENSBTAG00000003915	LARP6	100	90.447	ENSCAFG00020007296	LARP6	100	91.463	Canis_lupus_dingo
ENSBTAG00000003915	LARP6	100	98.374	ENSCHIG00000013742	LARP6	100	98.374	Capra_hircus
ENSBTAG00000003915	LARP6	86	90.588	ENSTSYG00000028124	LARP6	87	90.588	Carlito_syrichta
ENSBTAG00000003915	LARP6	86	89.858	ENSCAPG00000015452	LARP6	99	89.858	Cavia_aperea
ENSBTAG00000003915	LARP6	100	88.641	ENSCPOG00000022687	LARP6	100	88.641	Cavia_porcellus
ENSBTAG00000003915	LARP6	100	92.073	ENSCCAG00000036320	LARP6	100	92.073	Cebus_capucinus
ENSBTAG00000003915	LARP6	100	92.886	ENSCATG00000042432	LARP6	100	92.886	Cercocebus_atys
ENSBTAG00000003915	LARP6	100	90.467	ENSCLAG00000007893	LARP6	100	90.467	Chinchilla_lanigera
ENSBTAG00000003915	LARP6	100	92.683	ENSCSAG00000013672	LARP6	100	92.683	Chlorocebus_sabaeus
ENSBTAG00000003915	LARP6	97	91.423	ENSCHOG00000003318	LARP6	100	91.423	Choloepus_hoffmanni
ENSBTAG00000003915	LARP6	89	69.565	ENSCPBG00000010771	LARP6	84	69.565	Chrysemys_picta_bellii
ENSBTAG00000003915	LARP6	86	93.176	ENSCANG00000025833	LARP6	100	93.176	Colobus_angolensis_palliatus
ENSBTAG00000003915	LARP6	100	89.228	ENSCGRG00001024472	Larp6	100	89.228	Cricetulus_griseus_chok1gshd
ENSBTAG00000003915	LARP6	100	89.228	ENSCGRG00000004527	Larp6	100	89.228	Cricetulus_griseus_crigri
ENSBTAG00000003915	LARP6	95	57.971	ENSCSEG00000011196	larp6a	65	59.910	Cynoglossus_semilaevis
ENSBTAG00000003915	LARP6	87	59.865	ENSCVAG00000009605	larp6a	65	59.865	Cyprinodon_variegatus
ENSBTAG00000003915	LARP6	87	58.259	ENSDARG00000005355	larp6a	97	61.033	Danio_rerio
ENSBTAG00000003915	LARP6	100	91.463	ENSDNOG00000042993	LARP6	100	90.854	Dasypus_novemcinctus
ENSBTAG00000003915	LARP6	100	81.377	ENSDORG00000023910	Larp6	100	80.567	Dipodomys_ordii
ENSBTAG00000003915	LARP6	79	88.800	ENSETEG00000020390	LARP6	78	88.550	Echinops_telfairi
ENSBTAG00000003915	LARP6	100	94.919	ENSEASG00005005490	LARP6	73	94.919	Equus_asinus_asinus
ENSBTAG00000003915	LARP6	100	94.715	ENSECAG00000014190	LARP6	100	94.715	Equus_caballus
ENSBTAG00000003915	LARP6	87	58.837	ENSELUG00000007341	larp6a	64	58.837	Esox_lucius
ENSBTAG00000003915	LARP6	100	92.073	ENSFCAG00000001361	LARP6	100	92.073	Felis_catus
ENSBTAG00000003915	LARP6	96	60.625	ENSFALG00000012389	LARP6	99	64.375	Ficedula_albicollis
ENSBTAG00000003915	LARP6	89	90.682	ENSFDAG00000019994	LARP6	86	90.682	Fukomys_damarensis
ENSBTAG00000003915	LARP6	87	59.865	ENSFHEG00000010312	larp6a	63	59.641	Fundulus_heteroclitus
ENSBTAG00000003915	LARP6	98	64.754	ENSGALG00000004046	LARP6	96	64.754	Gallus_gallus
ENSBTAG00000003915	LARP6	87	60.090	ENSGAFG00000009426	larp6a	65	60.090	Gambusia_affinis
ENSBTAG00000003915	LARP6	86	59.954	ENSGACG00000014622	larp6a	97	59.954	Gasterosteus_aculeatus
ENSBTAG00000003915	LARP6	81	69.925	ENSGAGG00000010802	LARP6	59	69.925	Gopherus_agassizii
ENSBTAG00000003915	LARP6	86	93.412	ENSGGOG00000024151	LARP6	100	93.412	Gorilla_gorilla
ENSBTAG00000003915	LARP6	95	58.471	ENSHBUG00000021014	larp6a	61	59.775	Haplochromis_burtoni
ENSBTAG00000003915	LARP6	100	89.697	ENSHGLG00000015112	LARP6	100	89.697	Heterocephalus_glaber_female
ENSBTAG00000003915	LARP6	86	91.765	ENSHGLG00100013159	LARP6	100	91.765	Heterocephalus_glaber_male
ENSBTAG00000003915	LARP6	95	56.967	ENSHCOG00000001241	larp6a	84	59.234	Hippocampus_comes
ENSBTAG00000003915	LARP6	85	59.404	ENSIPUG00000010187	larp6	65	60.046	Ictalurus_punctatus
ENSBTAG00000003915	LARP6	92	37.609	ENSIPUG00000002828	-	98	36.854	Ictalurus_punctatus
ENSBTAG00000003915	LARP6	94	92.408	ENSSTOG00000024279	LARP6	98	92.478	Ictidomys_tridecemlineatus
ENSBTAG00000003915	LARP6	100	86.585	ENSJJAG00000011013	Larp6	100	86.585	Jaculus_jaculus
ENSBTAG00000003915	LARP6	87	61.074	ENSKMAG00000001702	larp6a	60	61.074	Kryptolebias_marmoratus
ENSBTAG00000003915	LARP6	95	56.173	ENSLBEG00000000170	larp6a	84	57.942	Labrus_bergylta
ENSBTAG00000003915	LARP6	97	64.375	ENSLACG00000018706	LARP6	90	63.958	Latimeria_chalumnae
ENSBTAG00000003915	LARP6	85	40.835	ENSLACG00000002786	-	98	44.159	Latimeria_chalumnae
ENSBTAG00000003915	LARP6	96	60.041	ENSLOCG00000014592	larp6a	69	59.426	Lepisosteus_oculatus
ENSBTAG00000003915	LARP6	84	45.047	ENSLOCG00000008547	-	82	42.217	Lepisosteus_oculatus
ENSBTAG00000003915	LARP6	91	90.604	ENSLAFG00000016343	LARP6	100	90.604	Loxodonta_africana
ENSBTAG00000003915	LARP6	91	93.556	ENSMFAG00000035507	LARP6	100	93.556	Macaca_fascicularis
ENSBTAG00000003915	LARP6	100	90.244	ENSMMUG00000004429	LARP6	100	89.431	Macaca_mulatta
ENSBTAG00000003915	LARP6	100	92.683	ENSMNEG00000045335	LARP6	100	92.683	Macaca_nemestrina
ENSBTAG00000003915	LARP6	86	93.176	ENSMLEG00000038587	LARP6	100	93.176	Mandrillus_leucophaeus
ENSBTAG00000003915	LARP6	95	58.230	ENSMAMG00000005261	larp6a	62	59.955	Mastacembelus_armatus
ENSBTAG00000003915	LARP6	95	58.471	ENSMZEG00005005774	larp6a	61	59.775	Maylandia_zebra
ENSBTAG00000003915	LARP6	85	69.431	ENSMGAG00000005077	LARP6	99	69.431	Meleagris_gallopavo
ENSBTAG00000003915	LARP6	100	89.024	ENSMAUG00000018486	Larp6	100	89.024	Mesocricetus_auratus
ENSBTAG00000003915	LARP6	100	89.837	ENSMICG00000011234	LARP6	100	89.837	Microcebus_murinus
ENSBTAG00000003915	LARP6	100	88.821	ENSMOCG00000010492	Larp6	100	88.821	Microtus_ochrogaster
ENSBTAG00000003915	LARP6	95	58.385	ENSMMOG00000016284	larp6a	85	60.360	Mola_mola
ENSBTAG00000003915	LARP6	97	74.792	ENSMODG00000009034	LARP6	93	74.792	Monodelphis_domestica
ENSBTAG00000003915	LARP6	95	58.436	ENSMALG00000014439	larp6a	84	60.179	Monopterus_albus
ENSBTAG00000003915	LARP6	100	89.431	MGP_CAROLIEiJ_G0032314	Larp6	100	89.431	Mus_caroli
ENSBTAG00000003915	LARP6	100	89.634	ENSMUSG00000034839	Larp6	100	89.634	Mus_musculus
ENSBTAG00000003915	LARP6	100	88.821	MGP_PahariEiJ_G0015180	Larp6	100	88.821	Mus_pahari
ENSBTAG00000003915	LARP6	100	89.431	MGP_SPRETEiJ_G0033452	Larp6	100	89.431	Mus_spretus
ENSBTAG00000003915	LARP6	87	90.654	ENSMPUG00000017086	LARP6	100	90.654	Mustela_putorius_furo
ENSBTAG00000003915	LARP6	100	91.667	ENSMLUG00000010319	LARP6	100	91.667	Myotis_lucifugus
ENSBTAG00000003915	LARP6	100	90.244	ENSNGAG00000014238	Larp6	100	90.244	Nannospalax_galili
ENSBTAG00000003915	LARP6	95	58.471	ENSNBRG00000008120	larp6a	84	59.775	Neolamprologus_brichardi
ENSBTAG00000003915	LARP6	100	92.480	ENSNLEG00000013691	LARP6	100	91.260	Nomascus_leucogenys
ENSBTAG00000003915	LARP6	85	74.302	ENSMEUG00000002270	LARP6	98	64.815	Notamacropus_eugenii
ENSBTAG00000003915	LARP6	72	78.125	ENSOPRG00000004868	-	100	78.125	Ochotona_princeps
ENSBTAG00000003915	LARP6	100	86.207	ENSODEG00000015958	LARP6	100	86.207	Octodon_degus
ENSBTAG00000003915	LARP6	95	58.436	ENSONIG00000002901	larp6a	84	59.732	Oreochromis_niloticus
ENSBTAG00000003915	LARP6	86	82.783	ENSOCUG00000009306	LARP6	99	82.783	Oryctolagus_cuniculus
ENSBTAG00000003915	LARP6	95	58.264	ENSORLG00000014256	larp6a	86	60.586	Oryzias_latipes
ENSBTAG00000003915	LARP6	95	58.264	ENSORLG00020019657	larp6a	63	60.586	Oryzias_latipes_hni
ENSBTAG00000003915	LARP6	95	58.264	ENSORLG00015017915	larp6a	63	60.586	Oryzias_latipes_hsok
ENSBTAG00000003915	LARP6	95	58.264	ENSOMEG00000017049	larp6a	63	60.586	Oryzias_melastigma
ENSBTAG00000003915	LARP6	100	90.041	ENSOGAG00000000522	LARP6	100	90.041	Otolemur_garnettii
ENSBTAG00000003915	LARP6	87	97.664	ENSOARG00000018750	LARP6	99	97.664	Ovis_aries
ENSBTAG00000003915	LARP6	86	93.412	ENSPPAG00000031247	LARP6	100	93.412	Pan_paniscus
ENSBTAG00000003915	LARP6	100	91.463	ENSPPRG00000011282	LARP6	100	91.463	Panthera_pardus
ENSBTAG00000003915	LARP6	86	91.294	ENSPTIG00000015318	LARP6	86	91.294	Panthera_tigris_altaica
ENSBTAG00000003915	LARP6	100	92.683	ENSPTRG00000007234	LARP6	100	92.683	Pan_troglodytes
ENSBTAG00000003915	LARP6	100	92.683	ENSPANG00000016362	LARP6	100	92.683	Papio_anubis
ENSBTAG00000003915	LARP6	96	58.714	ENSPKIG00000020103	larp6a	84	60.179	Paramormyrops_kingsleyae
ENSBTAG00000003915	LARP6	95	57.434	ENSPKIG00000004511	LARP6	67	58.261	Paramormyrops_kingsleyae
ENSBTAG00000003915	LARP6	64	81.053	ENSPSIG00000009071	LARP6	89	81.053	Pelodiscus_sinensis
ENSBTAG00000003915	LARP6	95	58.471	ENSPMGG00000006958	larp6a	86	60.449	Periophthalmus_magnuspinnatus
ENSBTAG00000003915	LARP6	100	88.821	ENSPEMG00000012909	Larp6	100	88.821	Peromyscus_maniculatus_bairdii
ENSBTAG00000003915	LARP6	97	75.417	ENSPCIG00000020765	LARP6	93	75.417	Phascolarctos_cinereus
ENSBTAG00000003915	LARP6	87	59.598	ENSPFOG00000014175	larp6a	84	59.598	Poecilia_formosa
ENSBTAG00000003915	LARP6	87	59.641	ENSPLAG00000011105	larp6a	62	59.641	Poecilia_latipinna
ENSBTAG00000003915	LARP6	87	59.865	ENSPMEG00000011085	larp6a	63	59.865	Poecilia_mexicana
ENSBTAG00000003915	LARP6	87	60.090	ENSPREG00000008067	larp6a	63	60.090	Poecilia_reticulata
ENSBTAG00000003915	LARP6	100	92.683	ENSPPYG00000006604	LARP6	100	92.683	Pongo_abelii
ENSBTAG00000003915	LARP6	65	91.566	ENSPCAG00000014197	LARP6	76	91.566	Procavia_capensis
ENSBTAG00000003915	LARP6	100	90.447	ENSPCOG00000022934	LARP6	100	90.447	Propithecus_coquereli
ENSBTAG00000003915	LARP6	100	92.683	ENSPVAG00000005618	LARP6	100	92.683	Pteropus_vampyrus
ENSBTAG00000003915	LARP6	95	58.471	ENSPNYG00000009835	larp6a	84	59.775	Pundamilia_nyererei
ENSBTAG00000003915	LARP6	87	58.166	ENSPNAG00000017966	larp6a	72	59.060	Pygocentrus_nattereri
ENSBTAG00000003915	LARP6	100	88.008	ENSRNOG00000012438	Larp6	100	88.008	Rattus_norvegicus
ENSBTAG00000003915	LARP6	98	90.309	ENSRBIG00000032902	LARP6	98	90.309	Rhinopithecus_bieti
ENSBTAG00000003915	LARP6	98	93.168	ENSRROG00000043074	LARP6	98	93.168	Rhinopithecus_roxellana
ENSBTAG00000003915	LARP6	86	92.941	ENSSBOG00000024190	LARP6	100	92.941	Saimiri_boliviensis_boliviensis
ENSBTAG00000003915	LARP6	87	74.533	ENSSHAG00000018495	LARP6	100	74.533	Sarcophilus_harrisii
ENSBTAG00000003915	LARP6	85	61.502	ENSSFOG00015023268	larp6a	82	62.441	Scleropages_formosus
ENSBTAG00000003915	LARP6	95	52.421	ENSSFOG00015002254	LARP6	91	51.992	Scleropages_formosus
ENSBTAG00000003915	LARP6	95	57.764	ENSSMAG00000009953	larp6a	62	58.784	Scophthalmus_maximus
ENSBTAG00000003915	LARP6	95	58.557	ENSSDUG00000007438	larp6a	62	60.314	Seriola_dumerili
ENSBTAG00000003915	LARP6	95	58.557	ENSSLDG00000016647	larp6a	62	60.314	Seriola_lalandi_dorsalis
ENSBTAG00000003915	LARP6	86	70.379	ENSSPUG00000011312	LARP6	99	70.379	Sphenodon_punctatus
ENSBTAG00000003915	LARP6	95	58.058	ENSSPAG00000020502	larp6a	62	60.000	Stegastes_partitus
ENSBTAG00000003915	LARP6	100	94.715	ENSSSCG00000004974	LARP6	100	94.715	Sus_scrofa
ENSBTAG00000003915	LARP6	85	68.246	ENSTGUG00000005808	LARP6	99	68.246	Taeniopygia_guttata
ENSBTAG00000003915	LARP6	95	57.613	ENSTRUG00000003151	larp6a	65	58.929	Takifugu_rubripes
ENSBTAG00000003915	LARP6	95	56.723	ENSTNIG00000011926	larp6a	88	57.919	Tetraodon_nigroviridis
ENSBTAG00000003915	LARP6	86	89.647	ENSTBEG00000015077	LARP6	100	89.647	Tupaia_belangeri
ENSBTAG00000003915	LARP6	93	84.716	ENSUAMG00000010467	LARP6	89	85.619	Ursus_americanus
ENSBTAG00000003915	LARP6	92	89.135	ENSVVUG00000015227	LARP6	99	89.135	Vulpes_vulpes
ENSBTAG00000003915	LARP6	96	65.756	ENSXETG00000020340	larp6	88	68.650	Xenopus_tropicalis
ENSBTAG00000003915	LARP6	87	60.314	ENSXCOG00000012654	larp6a	89	60.314	Xiphophorus_couchianus
ENSBTAG00000003915	LARP6	87	60.314	ENSXMAG00000021015	larp6a	60	60.314	Xiphophorus_maculatus