EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000003981 (Gene tree)
Gene ID: 512925
Gene Symbol: RRP1
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 23672 bases
Position: chr1:143851101-143874772
Accession: 34168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000040952	Nop52	PF05997.12	1.7e-68	1	1
ENSBTAP00000070184	Nop52	PF05997.12	1.7e-68	1	1
ENSBTAP00000066981	Nop52	PF05997.12	8e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000043376	-	1901	-	ENSBTAP00000040952	446 (aa)	-	Q148H9
ENSBTAT00000070390	-	1539	-	ENSBTAP00000066981	416 (aa)	-	UPI000572BD0F
ENSBTAT00000075666	-	1329	-	ENSBTAP00000070184	442 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000003981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000003981's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000003981	RRP1	99	64.240	ENSG00000160214	RRP1	96	93.023	Homo_sapiens
ENSBTAG00000003981	RRP1	98	66.815	ENSAMEG00000011448	RRP1	98	66.370	Ailuropoda_melanoleuca
ENSBTAG00000003981	RRP1	79	50.136	ENSAMEG00000011401	RRP1B	50	48.913	Ailuropoda_melanoleuca
ENSBTAG00000003981	RRP1	68	48.944	ENSACIG00000019121	rrp1	64	46.057	Amphilophus_citrinellus
ENSBTAG00000003981	RRP1	78	48.725	ENSAOCG00000017894	-	79	46.006	Amphiprion_ocellaris
ENSBTAG00000003981	RRP1	99	64.126	ENSANAG00000037815	RRP1	99	64.126	Aotus_nancymaae
ENSBTAG00000003981	RRP1	93	66.818	ENSCJAG00000043205	RRP1	90	66.136	Callithrix_jacchus
ENSBTAG00000003981	RRP1	98	65.939	ENSCAFG00000010646	RRP1	85	86.900	Canis_familiaris
ENSBTAG00000003981	RRP1	98	65.939	ENSCAFG00020018979	RRP1	99	65.784	Canis_lupus_dingo
ENSBTAG00000003981	RRP1	100	89.111	ENSCHIG00000020948	RRP1	100	89.778	Capra_hircus
ENSBTAG00000003981	RRP1	100	63.399	ENSTSYG00000012831	RRP1	100	63.124	Carlito_syrichta
ENSBTAG00000003981	RRP1	71	63.303	ENSCAPG00000008576	RRP1	85	63.422	Cavia_aperea
ENSBTAG00000003981	RRP1	77	48.324	ENSCPOG00000002396	RRP1B	55	44.691	Cavia_porcellus
ENSBTAG00000003981	RRP1	99	63.415	ENSCPOG00000038986	RRP1	99	62.832	Cavia_porcellus
ENSBTAG00000003981	RRP1	99	65.443	ENSCCAG00000029828	RRP1	99	64.579	Cebus_capucinus
ENSBTAG00000003981	RRP1	75	53.353	ENSCCAG00000029384	RRP1B	51	52.941	Cebus_capucinus
ENSBTAG00000003981	RRP1	99	64.147	ENSCATG00000015632	RRP1	99	65.142	Cercocebus_atys
ENSBTAG00000003981	RRP1	94	66.204	ENSCLAG00000011639	RRP1	99	64.758	Chinchilla_lanigera
ENSBTAG00000003981	RRP1	73	77.273	ENSCSAG00000007936	RRP1	100	75.758	Chlorocebus_sabaeus
ENSBTAG00000003981	RRP1	74	35.693	ENSCING00000003304	-	73	33.923	Ciona_intestinalis
ENSBTAG00000003981	RRP1	95	60.199	ENSCANG00000042611	RRP1	84	60.500	Colobus_angolensis_palliatus
ENSBTAG00000003981	RRP1	99	63.229	ENSCGRG00001011920	Rrp1	99	63.229	Cricetulus_griseus_chok1gshd
ENSBTAG00000003981	RRP1	73	52.096	ENSCGRG00001023882	-	62	63.889	Cricetulus_griseus_chok1gshd
ENSBTAG00000003981	RRP1	99	63.229	ENSCGRG00000008915	Rrp1	99	63.229	Cricetulus_griseus_crigri
ENSBTAG00000003981	RRP1	79	48.747	ENSCSEG00000020711	-	80	43.794	Cynoglossus_semilaevis
ENSBTAG00000003981	RRP1	80	44.505	ENSCVAG00000017568	-	93	44.505	Cyprinodon_variegatus
ENSBTAG00000003981	RRP1	74	46.407	ENSDARG00000103337	rrp1	52	43.548	Danio_rerio
ENSBTAG00000003981	RRP1	100	66.167	ENSDNOG00000019880	RRP1	100	65.517	Dasypus_novemcinctus
ENSBTAG00000003981	RRP1	96	57.971	ENSDORG00000002104	Rrp1	100	58.034	Dipodomys_ordii
ENSBTAG00000003981	RRP1	72	59.502	ENSETEG00000002963	-	72	59.502	Echinops_telfairi
ENSBTAG00000003981	RRP1	98	69.683	ENSEASG00005001673	RRP1	99	69.683	Equus_asinus_asinus
ENSBTAG00000003981	RRP1	98	70.136	ENSECAG00000015703	RRP1	100	69.977	Equus_caballus
ENSBTAG00000003981	RRP1	78	44.503	ENSELUG00000015885	-	87	46.417	Esox_lucius
ENSBTAG00000003981	RRP1	75	54.203	ENSFCAG00000010272	RRP1B	64	44.979	Felis_catus
ENSBTAG00000003981	RRP1	100	68.151	ENSFCAG00000008434	RRP1	100	68.597	Felis_catus
ENSBTAG00000003981	RRP1	99	62.054	ENSFDAG00000013728	RRP1	99	61.348	Fukomys_damarensis
ENSBTAG00000003981	RRP1	78	44.476	ENSGMOG00000001953	-	54	43.014	Gadus_morhua
ENSBTAG00000003981	RRP1	84	42.147	ENSGACG00000001438	rrp1	56	42.265	Gasterosteus_aculeatus
ENSBTAG00000003981	RRP1	80	57.263	ENSGAGG00000000375	RRP1B	51	53.886	Gopherus_agassizii
ENSBTAG00000003981	RRP1	98	64.069	ENSGGOG00000000173	RRP1	99	64.935	Gorilla_gorilla
ENSBTAG00000003981	RRP1	94	66.509	ENSHGLG00000017085	RRP1	95	65.402	Heterocephalus_glaber_female
ENSBTAG00000003981	RRP1	74	43.266	ENSIPUG00000000673	-	67	43.143	Ictalurus_punctatus
ENSBTAG00000003981	RRP1	95	67.285	ENSSTOG00000011116	RRP1	98	65.501	Ictidomys_tridecemlineatus
ENSBTAG00000003981	RRP1	75	52.632	ENSSTOG00000011790	RRP1B	55	48.855	Ictidomys_tridecemlineatus
ENSBTAG00000003981	RRP1	100	65.859	ENSJJAG00000018886	Rrp1	100	64.286	Jaculus_jaculus
ENSBTAG00000003981	RRP1	74	46.957	ENSKMAG00000005539	rrp1	51	47.826	Kryptolebias_marmoratus
ENSBTAG00000003981	RRP1	75	45.706	ENSLBEG00000021417	RRP1	93	44.974	Labrus_bergylta
ENSBTAG00000003981	RRP1	79	53.699	ENSLACG00000017332	-	51	51.157	Latimeria_chalumnae
ENSBTAG00000003981	RRP1	75	50.298	ENSLOCG00000004064	-	50	47.527	Lepisosteus_oculatus
ENSBTAG00000003981	RRP1	82	51.733	ENSLAFG00000000766	RRP1B	89	50.938	Loxodonta_africana
ENSBTAG00000003981	RRP1	93	78.740	ENSLAFG00000022901	RRP1	100	61.207	Loxodonta_africana
ENSBTAG00000003981	RRP1	99	66.307	ENSMFAG00000003202	RRP1	99	64.706	Macaca_fascicularis
ENSBTAG00000003981	RRP1	99	66.307	ENSMMUG00000012304	RRP1	99	64.706	Macaca_mulatta
ENSBTAG00000003981	RRP1	99	66.523	ENSMNEG00000031210	RRP1	99	64.924	Macaca_nemestrina
ENSBTAG00000003981	RRP1	95	61.814	ENSMLEG00000037797	RRP1	99	62.857	Mandrillus_leucophaeus
ENSBTAG00000003981	RRP1	99	54.120	ENSMAUG00000017653	Rrp1	98	54.444	Mesocricetus_auratus
ENSBTAG00000003981	RRP1	99	63.193	ENSMICG00000004700	RRP1	99	63.415	Microcebus_murinus
ENSBTAG00000003981	RRP1	100	54.158	ENSMOCG00000015687	Rrp1	100	54.379	Microtus_ochrogaster
ENSBTAG00000003981	RRP1	82	43.896	ENSMMOG00000019175	rrp1	98	43.896	Mola_mola
ENSBTAG00000003981	RRP1	76	62.931	ENSMODG00000021036	-	52	62.931	Monodelphis_domestica
ENSBTAG00000003981	RRP1	78	47.500	ENSMALG00000010310	rrp1	93	47.500	Monopterus_albus
ENSBTAG00000003981	RRP1	73	49.847	MGP_CAROLIEiJ_G0021376	Rrp1b	53	66.667	Mus_caroli
ENSBTAG00000003981	RRP1	98	76.772	MGP_CAROLIEiJ_G0015508	Rrp1	80	81.659	Mus_caroli
ENSBTAG00000003981	RRP1	73	50.755	ENSMUSG00000058392	Rrp1b	53	68.254	Mus_musculus
ENSBTAG00000003981	RRP1	95	76.378	ENSMUSG00000061032	Rrp1	79	81.223	Mus_musculus
ENSBTAG00000003981	RRP1	97	77.165	MGP_PahariEiJ_G0030921	Rrp1	80	81.659	Mus_pahari
ENSBTAG00000003981	RRP1	75	49.555	MGP_PahariEiJ_G0023695	Rrp1b	53	66.667	Mus_pahari
ENSBTAG00000003981	RRP1	73	51.682	MGP_SPRETEiJ_G0022290	Rrp1b	53	68.254	Mus_spretus
ENSBTAG00000003981	RRP1	96	76.378	MGP_SPRETEiJ_G0016321	Rrp1	79	81.223	Mus_spretus
ENSBTAG00000003981	RRP1	91	61.853	ENSMPUG00000009826	RRP1	77	86.463	Mustela_putorius_furo
ENSBTAG00000003981	RRP1	99	65.261	ENSMLUG00000017788	RRP1	81	87.773	Myotis_lucifugus
ENSBTAG00000003981	RRP1	83	46.966	ENSNGAG00000021073	Rrp1b	51	46.702	Nannospalax_galili
ENSBTAG00000003981	RRP1	97	48.148	ENSNGAG00000022344	Rrp1	76	66.812	Nannospalax_galili
ENSBTAG00000003981	RRP1	99	63.067	ENSNLEG00000034734	RRP1	99	64.363	Nomascus_leucogenys
ENSBTAG00000003981	RRP1	80	63.510	ENSOPRG00000001319	RRP1	100	63.788	Ochotona_princeps
ENSBTAG00000003981	RRP1	74	60.180	ENSOANG00000006472	-	90	57.183	Ornithorhynchus_anatinus
ENSBTAG00000003981	RRP1	80	76.471	ENSOCUG00000022843	-	77	78.723	Oryctolagus_cuniculus
ENSBTAG00000003981	RRP1	75	53.274	ENSOGAG00000009872	RRP1B	52	52.679	Otolemur_garnettii
ENSBTAG00000003981	RRP1	99	65.188	ENSOGAG00000006105	RRP1	98	65.188	Otolemur_garnettii
ENSBTAG00000003981	RRP1	100	82.667	ENSOARG00000011434	RRP1	100	82.667	Ovis_aries
ENSBTAG00000003981	RRP1	99	64.363	ENSPPAG00000029050	RRP1	99	65.443	Pan_paniscus
ENSBTAG00000003981	RRP1	100	67.483	ENSPPRG00000010656	RRP1	100	67.929	Panthera_pardus
ENSBTAG00000003981	RRP1	75	53.913	ENSPPRG00000010356	RRP1B	63	44.820	Panthera_pardus
ENSBTAG00000003981	RRP1	89	58.486	ENSPTIG00000019473	RRP1	87	58.225	Panthera_tigris_altaica
ENSBTAG00000003981	RRP1	69	53.156	ENSPTIG00000016894	RRP1B	67	42.512	Panthera_tigris_altaica
ENSBTAG00000003981	RRP1	99	63.812	ENSPTRG00000013962	RRP1	99	65.227	Pan_troglodytes
ENSBTAG00000003981	RRP1	99	65.086	ENSPANG00000015097	RRP1	99	66.017	Papio_anubis
ENSBTAG00000003981	RRP1	75	37.822	ENSPMGG00000007512	-	88	37.602	Periophthalmus_magnuspinnatus
ENSBTAG00000003981	RRP1	94	63.594	ENSPEMG00000018421	Rrp1	99	63.453	Peromyscus_maniculatus_bairdii
ENSBTAG00000003981	RRP1	81	51.622	ENSPCIG00000015513	RRP1B	52	52.432	Phascolarctos_cinereus
ENSBTAG00000003981	RRP1	83	58.530	ENSPCIG00000015523	-	82	57.743	Phascolarctos_cinereus
ENSBTAG00000003981	RRP1	78	47.778	ENSPLAG00000016684	-	51	48.056	Poecilia_latipinna
ENSBTAG00000003981	RRP1	78	48.056	ENSPMEG00000007042	-	51	43.021	Poecilia_mexicana
ENSBTAG00000003981	RRP1	99	63.499	ENSPPYG00000011474	RRP1	99	64.363	Pongo_abelii
ENSBTAG00000003981	RRP1	80	54.930	ENSPCAG00000008370	-	99	55.285	Procavia_capensis
ENSBTAG00000003981	RRP1	99	63.576	ENSPCOG00000017706	RRP1	99	64.238	Propithecus_coquereli
ENSBTAG00000003981	RRP1	83	58.571	ENSPVAG00000009925	-	82	58.571	Pteropus_vampyrus
ENSBTAG00000003981	RRP1	100	59.780	ENSRNOG00000001203	Rrp1	100	62.144	Rattus_norvegicus
ENSBTAG00000003981	RRP1	99	64.147	ENSRBIG00000032082	RRP1	99	64.706	Rhinopithecus_bieti
ENSBTAG00000003981	RRP1	99	64.224	ENSRROG00000039799	RRP1	99	64.924	Rhinopithecus_roxellana
ENSBTAG00000003981	RRP1	90	68.734	ENSSBOG00000034689	RRP1	99	66.372	Saimiri_boliviensis_boliviensis
ENSBTAG00000003981	RRP1	77	53.890	ENSSHAG00000017789	RRP1B	50	50.656	Sarcophilus_harrisii
ENSBTAG00000003981	RRP1	75	58.125	ENSSHAG00000010304	-	96	55.556	Sarcophilus_harrisii
ENSBTAG00000003981	RRP1	73	43.598	ENSSFOG00015003932	-	54	43.059	Scleropages_formosus
ENSBTAG00000003981	RRP1	78	46.849	ENSSMAG00000016847	-	86	46.348	Scophthalmus_maximus
ENSBTAG00000003981	RRP1	99	74.388	ENSSSCG00000037061	RRP1	100	75.724	Sus_scrofa
ENSBTAG00000003981	RRP1	81	49.737	ENSSSCG00000021698	RRP1B	57	50.000	Sus_scrofa
ENSBTAG00000003981	RRP1	75	48.127	ENSTRUG00000017592	rrp1	97	46.974	Takifugu_rubripes
ENSBTAG00000003981	RRP1	87	42.998	ENSTNIG00000005053	rrp1	54	48.378	Tetraodon_nigroviridis
ENSBTAG00000003981	RRP1	69	51.186	ENSTBEG00000000422	RRP1B	51	50.169	Tupaia_belangeri
ENSBTAG00000003981	RRP1	66	73.154	ENSTBEG00000001260	-	64	73.188	Tupaia_belangeri
ENSBTAG00000003981	RRP1	85	79.512	ENSTTRG00000011162	RRP1	83	79.512	Tursiops_truncatus
ENSBTAG00000003981	RRP1	86	50.627	ENSUAMG00000026765	RRP1B	57	50.126	Ursus_americanus
ENSBTAG00000003981	RRP1	77	57.846	ENSUAMG00000014189	-	97	55.793	Ursus_americanus
ENSBTAG00000003981	RRP1	78	49.708	ENSUMAG00000025510	RRP1B	76	44.975	Ursus_maritimus
ENSBTAG00000003981	RRP1	96	63.990	ENSUMAG00000025507	RRP1	98	61.658	Ursus_maritimus
ENSBTAG00000003981	RRP1	72	55.836	ENSVVUG00000024498	-	77	55.521	Vulpes_vulpes
ENSBTAG00000003981	RRP1	82	46.891	ENSXMAG00000023123	-	55	42.667	Xiphophorus_maculatus