EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000004172 (Gene tree)
Gene ID: 514102
Gene Symbol: SETD1B
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 15592 bases
Position: chr17:53482843-53498434
Accession: 50140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000022553	RRM_1	PF00076.22	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000022553	-	5396	-	ENSBTAP00000022553	1793 (aa)	-	F1N6Y5

Gene Model

Click here to download ENSBTAG00000004172's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000004172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000004172	SETD1B	54	74.576	ENSAPLG00000005217	SETD1B	57	75.874	Anas_platyrhynchos
ENSBTAG00000004172	SETD1B	96	83.190	ENSCATG00000035803	SETD1B	85	94.091	Cercocebus_atys
ENSBTAG00000004172	SETD1B	52	98.016	ENSCLAG00000013200	SETD1B	51	98.016	Chinchilla_lanigera
ENSBTAG00000004172	SETD1B	98	82.670	ENSCSAG00000002187	SETD1B	99	82.950	Chlorocebus_sabaeus
ENSBTAG00000004172	SETD1B	86	92.683	ENSCANG00000023445	SETD1B	91	91.765	Colobus_angolensis_palliatus
ENSBTAG00000004172	SETD1B	61	97.260	ENSCGRG00000018075	Setd1b	52	96.804	Cricetulus_griseus_crigri
ENSBTAG00000004172	SETD1B	92	95.428	ENSEASG00005012369	SETD1B	86	95.428	Equus_asinus_asinus
ENSBTAG00000004172	SETD1B	54	90.610	ENSHGLG00000012063	SETD1B	56	89.567	Heterocephalus_glaber_female
ENSBTAG00000004172	SETD1B	73	91.892	ENSLAFG00000026518	SETD1B	82	91.892	Loxodonta_africana
ENSBTAG00000004172	SETD1B	57	77.051	ENSMFAG00000030930	SETD1B	87	81.740	Macaca_fascicularis
ENSBTAG00000004172	SETD1B	54	81.939	ENSMMUG00000012842	SETD1B	50	81.967	Macaca_mulatta
ENSBTAG00000004172	SETD1B	96	82.471	ENSMNEG00000014228	SETD1B	87	82.258	Macaca_nemestrina
ENSBTAG00000004172	SETD1B	54	80.102	ENSMLEG00000039573	SETD1B	50	80.020	Mandrillus_leucophaeus
ENSBTAG00000004172	SETD1B	67	91.150	ENSODEG00000010155	SETD1B	61	91.298	Octodon_degus
ENSBTAG00000004172	SETD1B	91	79.574	ENSOCUG00000017708	SETD1B	50	72.737	Oryctolagus_cuniculus
ENSBTAG00000004172	SETD1B	95	94.090	ENSOARG00000012777	SETD1B	87	94.266	Ovis_aries
ENSBTAG00000004172	SETD1B	84	94.167	ENSPPRG00000021041	SETD1B	85	91.888	Panthera_pardus
ENSBTAG00000004172	SETD1B	73	91.579	ENSSSCG00000009806	SETD1B	72	91.549	Sus_scrofa
ENSBTAG00000004172	SETD1B	63	91.696	ENSUAMG00000008729	SETD1B	52	94.133	Ursus_americanus