EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000004225 (Gene tree)
Gene ID: 510820
Gene Symbol: TSR1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 11336 bases
Position: chr19:23296346-23307681
Accession: 36447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000005534	AARP2CN	PF08142.12	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000005534	-	4949	-	ENSBTAP00000005534	804 (aa)	XP_005220141	F1MSR6

Gene Model

Click here to download ENSBTAG00000004225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000004225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000004225	TSR1	100	89.826	ENSG00000167721	TSR1	100	90.074	Homo_sapiens
ENSBTAG00000004225	TSR1	99	55.317	ENSAPOG00000020891	tsr1	99	54.742	Acanthochromis_polyacanthus
ENSBTAG00000004225	TSR1	100	89.803	ENSAMEG00000007599	TSR1	99	89.189	Ailuropoda_melanoleuca
ENSBTAG00000004225	TSR1	99	56.773	ENSACIG00000007090	tsr1	99	56.667	Amphilophus_citrinellus
ENSBTAG00000004225	TSR1	99	54.578	ENSAOCG00000023284	tsr1	99	54.282	Amphiprion_ocellaris
ENSBTAG00000004225	TSR1	94	55.359	ENSAPEG00000008452	tsr1	100	55.058	Amphiprion_percula
ENSBTAG00000004225	TSR1	99	54.132	ENSATEG00000021961	tsr1	99	55.210	Anabas_testudineus
ENSBTAG00000004225	TSR1	92	70.067	ENSAPLG00000013422	TSR1	100	70.067	Anas_platyrhynchos
ENSBTAG00000004225	TSR1	71	58.632	ENSACAG00000000859	TSR1	92	58.291	Anolis_carolinensis
ENSBTAG00000004225	TSR1	100	90.547	ENSANAG00000031071	TSR1	100	89.925	Aotus_nancymaae
ENSBTAG00000004225	TSR1	99	55.850	ENSACLG00000007595	tsr1	98	55.327	Astatotilapia_calliptera
ENSBTAG00000004225	TSR1	50	49.639	ENSAMXG00000008470	tsr1	91	49.195	Astyanax_mexicanus
ENSBTAG00000004225	TSR1	97	39.043	WBGene00006497	tag-151	95	40.176	Caenorhabditis_elegans
ENSBTAG00000004225	TSR1	100	90.299	ENSCJAG00000012456	TSR1	100	89.677	Callithrix_jacchus
ENSBTAG00000004225	TSR1	90	89.945	ENSCAFG00000019273	-	100	90.107	Canis_familiaris
ENSBTAG00000004225	TSR1	100	90.186	ENSCAFG00000002106	-	100	90.186	Canis_familiaris
ENSBTAG00000004225	TSR1	100	89.938	ENSCAFG00020009728	TSR1	100	89.938	Canis_lupus_dingo
ENSBTAG00000004225	TSR1	100	98.134	ENSCHIG00000023935	TSR1	100	98.134	Capra_hircus
ENSBTAG00000004225	TSR1	100	90.174	ENSTSYG00000005468	TSR1	100	89.677	Carlito_syrichta
ENSBTAG00000004225	TSR1	93	88.740	ENSCPOG00000014833	TSR1	99	88.740	Cavia_porcellus
ENSBTAG00000004225	TSR1	93	91.153	ENSCCAG00000028962	TSR1	98	90.483	Cebus_capucinus
ENSBTAG00000004225	TSR1	100	90.074	ENSCATG00000044262	TSR1	100	89.454	Cercocebus_atys
ENSBTAG00000004225	TSR1	100	88.806	ENSCLAG00000005567	TSR1	100	88.433	Chinchilla_lanigera
ENSBTAG00000004225	TSR1	100	90.074	ENSCSAG00000013788	TSR1	100	89.454	Chlorocebus_sabaeus
ENSBTAG00000004225	TSR1	99	70.162	ENSCPBG00000020363	TSR1	97	71.040	Chrysemys_picta_bellii
ENSBTAG00000004225	TSR1	97	47.051	ENSCING00000020658	-	99	46.550	Ciona_intestinalis
ENSBTAG00000004225	TSR1	96	46.641	ENSCSAVG00000001875	-	99	46.447	Ciona_savignyi
ENSBTAG00000004225	TSR1	100	82.090	ENSCANG00000033056	TSR1	100	79.901	Colobus_angolensis_palliatus
ENSBTAG00000004225	TSR1	100	86.584	ENSCGRG00001023942	Tsr1	100	86.957	Cricetulus_griseus_chok1gshd
ENSBTAG00000004225	TSR1	100	80.970	ENSCGRG00000013015	Tsr1	100	82.214	Cricetulus_griseus_crigri
ENSBTAG00000004225	TSR1	99	54.051	ENSCSEG00000013009	tsr1	99	55.260	Cynoglossus_semilaevis
ENSBTAG00000004225	TSR1	99	56.590	ENSCVAG00000000506	tsr1	99	56.068	Cyprinodon_variegatus
ENSBTAG00000004225	TSR1	99	54.567	ENSDARG00000007744	tsr1	99	55.257	Danio_rerio
ENSBTAG00000004225	TSR1	100	90.174	ENSDNOG00000004715	TSR1	100	90.547	Dasypus_novemcinctus
ENSBTAG00000004225	TSR1	97	76.350	ENSDORG00000023234	-	100	76.350	Dipodomys_ordii
ENSBTAG00000004225	TSR1	100	87.562	ENSDORG00000016371	-	100	87.562	Dipodomys_ordii
ENSBTAG00000004225	TSR1	97	44.238	FBgn0037073	Tsr1	96	44.541	Drosophila_melanogaster
ENSBTAG00000004225	TSR1	92	90.492	ENSETEG00000017534	TSR1	91	90.492	Echinops_telfairi
ENSBTAG00000004225	TSR1	94	54.068	ENSEBUG00000013731	TSR1	96	53.482	Eptatretus_burgeri
ENSBTAG00000004225	TSR1	100	93.159	ENSEASG00005009302	TSR1	97	93.159	Equus_asinus_asinus
ENSBTAG00000004225	TSR1	100	92.910	ENSECAG00000009114	TSR1	100	92.910	Equus_caballus
ENSBTAG00000004225	TSR1	99	55.569	ENSELUG00000020984	tsr1	95	56.174	Esox_lucius
ENSBTAG00000004225	TSR1	100	92.040	ENSFCAG00000006313	TSR1	100	92.040	Felis_catus
ENSBTAG00000004225	TSR1	99	70.197	ENSFALG00000006532	TSR1	99	70.813	Ficedula_albicollis
ENSBTAG00000004225	TSR1	100	89.677	ENSFDAG00000006038	TSR1	100	89.801	Fukomys_damarensis
ENSBTAG00000004225	TSR1	99	55.036	ENSFHEG00000003626	tsr1	98	55.235	Fundulus_heteroclitus
ENSBTAG00000004225	TSR1	99	53.602	ENSGMOG00000010336	tsr1	99	54.501	Gadus_morhua
ENSBTAG00000004225	TSR1	99	55.060	ENSGAFG00000012993	tsr1	98	55.301	Gambusia_affinis
ENSBTAG00000004225	TSR1	99	54.835	ENSGACG00000010843	tsr1	99	55.447	Gasterosteus_aculeatus
ENSBTAG00000004225	TSR1	99	70.677	ENSGAGG00000025619	-	99	70.844	Gopherus_agassizii
ENSBTAG00000004225	TSR1	100	90.074	ENSGGOG00000001704	TSR1	100	90.447	Gorilla_gorilla
ENSBTAG00000004225	TSR1	99	55.769	ENSHBUG00000017904	tsr1	100	56.561	Haplochromis_burtoni
ENSBTAG00000004225	TSR1	100	90.299	ENSHGLG00000012806	-	100	90.299	Heterocephalus_glaber_female
ENSBTAG00000004225	TSR1	97	80.077	ENSHGLG00000015688	-	99	79.177	Heterocephalus_glaber_female
ENSBTAG00000004225	TSR1	100	90.299	ENSHGLG00100015392	TSR1	100	90.299	Heterocephalus_glaber_male
ENSBTAG00000004225	TSR1	99	57.178	ENSHCOG00000001432	tsr1	99	57.001	Hippocampus_comes
ENSBTAG00000004225	TSR1	99	55.663	ENSIPUG00000004618	tsr1	99	56.558	Ictalurus_punctatus
ENSBTAG00000004225	TSR1	100	88.710	ENSSTOG00000011819	TSR1	100	89.206	Ictidomys_tridecemlineatus
ENSBTAG00000004225	TSR1	92	81.165	ENSJJAG00000019505	Tsr1	95	80.733	Jaculus_jaculus
ENSBTAG00000004225	TSR1	99	55.181	ENSKMAG00000005763	tsr1	98	54.303	Kryptolebias_marmoratus
ENSBTAG00000004225	TSR1	99	55.222	ENSLBEG00000021823	tsr1	98	55.942	Labrus_bergylta
ENSBTAG00000004225	TSR1	99	64.137	ENSLACG00000002197	TSR1	99	64.496	Latimeria_chalumnae
ENSBTAG00000004225	TSR1	82	58.569	ENSLOCG00000006491	TSR1	88	58.185	Lepisosteus_oculatus
ENSBTAG00000004225	TSR1	100	90.323	ENSMFAG00000021330	TSR1	100	89.702	Macaca_fascicularis
ENSBTAG00000004225	TSR1	100	89.950	ENSMMUG00000017519	TSR1	100	89.330	Macaca_mulatta
ENSBTAG00000004225	TSR1	100	89.950	ENSMNEG00000031382	TSR1	100	89.330	Macaca_nemestrina
ENSBTAG00000004225	TSR1	100	89.950	ENSMLEG00000036733	TSR1	100	89.330	Mandrillus_leucophaeus
ENSBTAG00000004225	TSR1	99	55.317	ENSMAMG00000017918	tsr1	98	54.719	Mastacembelus_armatus
ENSBTAG00000004225	TSR1	99	56.145	ENSMZEG00005007477	tsr1	99	55.623	Maylandia_zebra
ENSBTAG00000004225	TSR1	99	69.250	ENSMGAG00000005576	TSR1	99	69.902	Meleagris_gallopavo
ENSBTAG00000004225	TSR1	100	92.537	ENSMICG00000012943	TSR1	100	92.537	Microcebus_murinus
ENSBTAG00000004225	TSR1	100	86.335	ENSMOCG00000022764	Tsr1	100	87.081	Microtus_ochrogaster
ENSBTAG00000004225	TSR1	99	54.745	ENSMMOG00000014280	tsr1	99	56.326	Mola_mola
ENSBTAG00000004225	TSR1	100	79.255	ENSMODG00000010658	TSR1	100	78.882	Monodelphis_domestica
ENSBTAG00000004225	TSR1	99	55.449	ENSMALG00000011681	tsr1	99	55.409	Monopterus_albus
ENSBTAG00000004225	TSR1	100	87.811	MGP_CAROLIEiJ_G0016727	Tsr1	100	87.313	Mus_caroli
ENSBTAG00000004225	TSR1	100	88.308	ENSMUSG00000038335	Tsr1	100	87.811	Mus_musculus
ENSBTAG00000004225	TSR1	100	88.308	MGP_PahariEiJ_G0017864	Tsr1	100	87.811	Mus_pahari
ENSBTAG00000004225	TSR1	100	88.308	MGP_SPRETEiJ_G0017570	Tsr1	100	87.811	Mus_spretus
ENSBTAG00000004225	TSR1	82	89.634	ENSMPUG00000013000	TSR1	100	89.634	Mustela_putorius_furo
ENSBTAG00000004225	TSR1	100	93.532	ENSMLUG00000003505	TSR1	100	93.532	Myotis_lucifugus
ENSBTAG00000004225	TSR1	99	55.582	ENSNBRG00000020728	tsr1	98	55.942	Neolamprologus_brichardi
ENSBTAG00000004225	TSR1	100	80.970	ENSNLEG00000017184	TSR1	100	83.831	Nomascus_leucogenys
ENSBTAG00000004225	TSR1	100	73.201	ENSMEUG00000015828	TSR1	100	73.391	Notamacropus_eugenii
ENSBTAG00000004225	TSR1	99	55.822	ENSONIG00000013131	tsr1	99	56.448	Oreochromis_niloticus
ENSBTAG00000004225	TSR1	96	73.650	ENSOANG00000008637	TSR1	100	73.136	Ornithorhynchus_anatinus
ENSBTAG00000004225	TSR1	100	90.050	ENSOCUG00000014256	TSR1	100	90.050	Oryctolagus_cuniculus
ENSBTAG00000004225	TSR1	99	54.502	ENSORLG00000004926	tsr1	98	55.904	Oryzias_latipes
ENSBTAG00000004225	TSR1	99	54.982	ENSORLG00020008792	tsr1	98	55.609	Oryzias_latipes_hni
ENSBTAG00000004225	TSR1	99	54.382	ENSORLG00015013838	tsr1	98	56.024	Oryzias_latipes_hsok
ENSBTAG00000004225	TSR1	99	54.502	ENSOMEG00000004830	tsr1	98	55.181	Oryzias_melastigma
ENSBTAG00000004225	TSR1	100	89.766	ENSOGAG00000004492	TSR1	100	89.396	Otolemur_garnettii
ENSBTAG00000004225	TSR1	100	98.134	ENSOARG00000015437	TSR1	97	98.134	Ovis_aries
ENSBTAG00000004225	TSR1	100	89.950	ENSPPAG00000036355	TSR1	100	90.199	Pan_paniscus
ENSBTAG00000004225	TSR1	100	92.040	ENSPPRG00000015519	-	100	92.040	Panthera_pardus
ENSBTAG00000004225	TSR1	100	92.164	ENSPTIG00000010608	TSR1	100	92.164	Panthera_tigris_altaica
ENSBTAG00000004225	TSR1	100	89.950	ENSPTRG00000008547	TSR1	100	90.199	Pan_troglodytes
ENSBTAG00000004225	TSR1	100	86.849	ENSPANG00000024463	TSR1	100	86.228	Papio_anubis
ENSBTAG00000004225	TSR1	99	55.177	ENSPKIG00000013972	tsr1	99	55.664	Paramormyrops_kingsleyae
ENSBTAG00000004225	TSR1	87	69.645	ENSPSIG00000018258	TSR1	99	70.397	Pelodiscus_sinensis
ENSBTAG00000004225	TSR1	99	57.055	ENSPMGG00000011577	tsr1	98	56.810	Periophthalmus_magnuspinnatus
ENSBTAG00000004225	TSR1	100	86.816	ENSPEMG00000018033	Tsr1	100	86.194	Peromyscus_maniculatus_bairdii
ENSBTAG00000004225	TSR1	100	79.653	ENSPCIG00000009357	TSR1	98	80.470	Phascolarctos_cinereus
ENSBTAG00000004225	TSR1	92	55.078	ENSPFOG00000004483	TSR1	99	56.242	Poecilia_formosa
ENSBTAG00000004225	TSR1	99	55.351	ENSPLAG00000022320	tsr1	99	55.706	Poecilia_latipinna
ENSBTAG00000004225	TSR1	99	55.024	ENSPMEG00000004577	tsr1	98	55.928	Poecilia_mexicana
ENSBTAG00000004225	TSR1	97	55.542	ENSPREG00000010354	tsr1	94	55.995	Poecilia_reticulata
ENSBTAG00000004225	TSR1	100	82.469	ENSPPYG00000007792	TSR1	100	82.346	Pongo_abelii
ENSBTAG00000004225	TSR1	53	89.474	ENSPCAG00000012973	-	72	89.474	Procavia_capensis
ENSBTAG00000004225	TSR1	100	91.915	ENSPCOG00000017928	TSR1	100	91.915	Propithecus_coquereli
ENSBTAG00000004225	TSR1	100	92.537	ENSPVAG00000002162	TSR1	100	91.915	Pteropus_vampyrus
ENSBTAG00000004225	TSR1	99	55.971	ENSPNYG00000016163	tsr1	98	55.448	Pundamilia_nyererei
ENSBTAG00000004225	TSR1	99	54.850	ENSPNAG00000008659	tsr1	99	55.210	Pygocentrus_nattereri
ENSBTAG00000004225	TSR1	100	87.578	ENSRNOG00000002980	Tsr1	100	87.081	Rattus_norvegicus
ENSBTAG00000004225	TSR1	100	89.826	ENSRBIG00000040016	TSR1	100	89.206	Rhinopithecus_bieti
ENSBTAG00000004225	TSR1	100	89.826	ENSRROG00000030361	TSR1	100	89.206	Rhinopithecus_roxellana
ENSBTAG00000004225	TSR1	96	31.266	YDL060W	-	98	30.597	Saccharomyces_cerevisiae
ENSBTAG00000004225	TSR1	100	91.045	ENSSBOG00000020785	TSR1	100	90.423	Saimiri_boliviensis_boliviensis
ENSBTAG00000004225	TSR1	100	78.094	ENSSHAG00000011394	TSR1	100	78.067	Sarcophilus_harrisii
ENSBTAG00000004225	TSR1	99	57.038	ENSSFOG00015005455	tsr1	99	56.495	Scleropages_formosus
ENSBTAG00000004225	TSR1	99	54.916	ENSSMAG00000009504	tsr1	99	55.114	Scophthalmus_maximus
ENSBTAG00000004225	TSR1	99	55.928	ENSSDUG00000012074	tsr1	98	55.048	Seriola_dumerili
ENSBTAG00000004225	TSR1	99	56.303	ENSSLDG00000002031	tsr1	98	55.301	Seriola_lalandi_dorsalis
ENSBTAG00000004225	TSR1	100	77.861	ENSSARG00000000759	TSR1	100	77.861	Sorex_araneus
ENSBTAG00000004225	TSR1	99	69.127	ENSSPUG00000007042	TSR1	99	68.758	Sphenodon_punctatus
ENSBTAG00000004225	TSR1	99	54.893	ENSSPAG00000021951	tsr1	99	55.102	Stegastes_partitus
ENSBTAG00000004225	TSR1	100	94.279	ENSSSCG00000038534	TSR1	100	94.279	Sus_scrofa
ENSBTAG00000004225	TSR1	90	71.526	ENSTGUG00000005883	TSR1	99	71.956	Taeniopygia_guttata
ENSBTAG00000004225	TSR1	99	56.848	ENSTRUG00000004665	tsr1	99	57.455	Takifugu_rubripes
ENSBTAG00000004225	TSR1	99	57.143	ENSTNIG00000016196	tsr1	99	57.021	Tetraodon_nigroviridis
ENSBTAG00000004225	TSR1	67	93.077	ENSTBEG00000015275	-	67	93.077	Tupaia_belangeri
ENSBTAG00000004225	TSR1	100	93.781	ENSTTRG00000001177	TSR1	100	93.781	Tursiops_truncatus
ENSBTAG00000004225	TSR1	100	89.677	ENSUAMG00000025160	TSR1	99	90.356	Ursus_americanus
ENSBTAG00000004225	TSR1	97	89.514	ENSUMAG00000009294	TSR1	99	89.514	Ursus_maritimus
ENSBTAG00000004225	TSR1	84	91.085	ENSVPAG00000000228	TSR1	100	91.085	Vicugna_pacos
ENSBTAG00000004225	TSR1	100	89.814	ENSVVUG00000021767	TSR1	100	89.814	Vulpes_vulpes
ENSBTAG00000004225	TSR1	99	60.172	ENSXETG00000023797	tsr1	100	61.060	Xenopus_tropicalis
ENSBTAG00000004225	TSR1	99	55.623	ENSXCOG00000009635	tsr1	99	55.746	Xiphophorus_couchianus
ENSBTAG00000004225	TSR1	99	54.458	ENSXMAG00000001397	tsr1	96	55.502	Xiphophorus_maculatus