EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000004290 (Gene tree)
Gene ID: 539411
Gene Symbol: DDX28
Alias: -
Full Name: Bos taurus DEAD-box helicase 28 (DDX28)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 1833 bases
Position: chr18:35478077-35479909
Accession: NM_001105422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000005622	DEAD	PF00270.29	2.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000005622	-	1833	-	ENSBTAP00000005622	545 (aa)	-	A7YWQ8

Gene Model

Click here to download ENSBTAG00000004290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000004290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000004290	DDX28	66	30.366	ENSBTAG00000007266	DDX55	51	30.366
ENSBTAG00000004290	DDX28	72	35.623	ENSBTAG00000019608	DDX47	78	35.623
ENSBTAG00000004290	DDX28	66	31.389	ENSBTAG00000009887	DDX17	70	30.255
ENSBTAG00000004290	DDX28	72	30.457	ENSBTAG00000021814	-	56	30.457
ENSBTAG00000004290	DDX28	73	30.827	ENSBTAG00000000811	DDX49	76	30.750
ENSBTAG00000004290	DDX28	69	30.077	ENSBTAG00000046635	-	56	30.077
ENSBTAG00000004290	DDX28	70	31.552	ENSBTAG00000020563	DDX59	58	31.552
ENSBTAG00000004290	DDX28	67	38.710	ENSBTAG00000009906	DDX1	53	38.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000004290	DDX28	99	85.185	ENSG00000182810	DDX28	100	85.185	Homo_sapiens
ENSBTAG00000004290	DDX28	93	48.350	ENSAPOG00000000991	ddx28	88	48.350	Acanthochromis_polyacanthus
ENSBTAG00000004290	DDX28	99	86.456	ENSAMEG00000019426	DDX28	97	87.115	Ailuropoda_melanoleuca
ENSBTAG00000004290	DDX28	92	47.758	ENSACIG00000021615	ddx28	89	47.758	Amphilophus_citrinellus
ENSBTAG00000004290	DDX28	93	48.932	ENSAOCG00000004610	ddx28	88	48.932	Amphiprion_ocellaris
ENSBTAG00000004290	DDX28	93	48.738	ENSAPEG00000002143	ddx28	88	48.738	Amphiprion_percula
ENSBTAG00000004290	DDX28	94	49.809	ENSATEG00000018691	ddx28	91	49.809	Anabas_testudineus
ENSBTAG00000004290	DDX28	99	53.420	ENSACAG00000009755	DDX28	94	54.492	Anolis_carolinensis
ENSBTAG00000004290	DDX28	92	46.680	ENSACLG00000012984	ddx28	89	46.680	Astatotilapia_calliptera
ENSBTAG00000004290	DDX28	97	48.288	ENSAMXG00000005878	ddx28	92	48.968	Astyanax_mexicanus
ENSBTAG00000004290	DDX28	97	86.767	ENSCAFG00000020327	DDX28	99	86.767	Canis_familiaris
ENSBTAG00000004290	DDX28	97	86.767	ENSCAFG00020019785	DDX28	99	86.767	Canis_lupus_dingo
ENSBTAG00000004290	DDX28	100	96.330	ENSCHIG00000009658	DDX28	100	96.330	Capra_hircus
ENSBTAG00000004290	DDX28	99	80.148	ENSCPOG00000013746	DDX28	97	81.154	Cavia_porcellus
ENSBTAG00000004290	DDX28	99	82.931	ENSCSAG00000018472	DDX28	99	82.931	Chlorocebus_sabaeus
ENSBTAG00000004290	DDX28	86	60.722	ENSCPBG00000012105	DDX28	85	60.557	Chrysemys_picta_bellii
ENSBTAG00000004290	DDX28	67	38.933	ENSCSAVG00000006341	-	94	38.933	Ciona_savignyi
ENSBTAG00000004290	DDX28	96	81.870	ENSCGRG00001024412	Ddx28	100	81.870	Cricetulus_griseus_chok1gshd
ENSBTAG00000004290	DDX28	94	48.654	ENSCSEG00000011651	ddx28	90	48.654	Cynoglossus_semilaevis
ENSBTAG00000004290	DDX28	93	50.290	ENSCVAG00000004044	ddx28	91	50.290	Cyprinodon_variegatus
ENSBTAG00000004290	DDX28	94	48.571	ENSDARG00000060411	ddx28	92	48.571	Danio_rerio
ENSBTAG00000004290	DDX28	68	86.685	ENSDNOG00000033593	DDX28	99	86.685	Dasypus_novemcinctus
ENSBTAG00000004290	DDX28	99	80.334	ENSDORG00000028868	Ddx28	99	80.334	Dipodomys_ordii
ENSBTAG00000004290	DDX28	87	33.817	FBgn0086130	Dbp21E2	87	33.678	Drosophila_melanogaster
ENSBTAG00000004290	DDX28	99	82.407	ENSETEG00000001062	-	96	83.493	Echinops_telfairi
ENSBTAG00000004290	DDX28	74	44.271	ENSEBUG00000004791	ddx28	75	44.560	Eptatretus_burgeri
ENSBTAG00000004290	DDX28	99	88.889	ENSEASG00005020387	DDX28	100	88.889	Equus_asinus_asinus
ENSBTAG00000004290	DDX28	99	89.259	ENSECAG00000006451	DDX28	100	89.259	Equus_caballus
ENSBTAG00000004290	DDX28	77	74.940	ENSEEUG00000005017	DDX28	96	75.426	Erinaceus_europaeus
ENSBTAG00000004290	DDX28	92	50.778	ENSELUG00000005302	ddx28	96	50.682	Esox_lucius
ENSBTAG00000004290	DDX28	99	87.013	ENSFCAG00000012858	DDX28	96	88.077	Felis_catus
ENSBTAG00000004290	DDX28	94	50.573	ENSFHEG00000012573	ddx28	92	50.573	Fundulus_heteroclitus
ENSBTAG00000004290	DDX28	94	47.510	ENSGMOG00000017045	ddx28	97	47.318	Gadus_morhua
ENSBTAG00000004290	DDX28	92	50.864	ENSGALG00000048700	DDX28	88	51.823	Gallus_gallus
ENSBTAG00000004290	DDX28	93	48.833	ENSGAFG00000009249	ddx28	89	48.833	Gambusia_affinis
ENSBTAG00000004290	DDX28	98	47.243	ENSGACG00000016367	ddx28	95	48.092	Gasterosteus_aculeatus
ENSBTAG00000004290	DDX28	83	57.456	ENSGAGG00000004565	DDX28	97	57.456	Gopherus_agassizii
ENSBTAG00000004290	DDX28	99	85.370	ENSGGOG00000001220	DDX28	100	85.370	Gorilla_gorilla
ENSBTAG00000004290	DDX28	92	48.828	ENSHBUG00000001016	ddx28	89	48.828	Haplochromis_burtoni
ENSBTAG00000004290	DDX28	93	46.498	ENSHCOG00000017590	ddx28	91	46.498	Hippocampus_comes
ENSBTAG00000004290	DDX28	95	48.968	ENSIPUG00000017350	Ddx28	92	48.968	Ictalurus_punctatus
ENSBTAG00000004290	DDX28	99	84.045	ENSSTOG00000002064	DDX28	99	84.045	Ictidomys_tridecemlineatus
ENSBTAG00000004290	DDX28	99	78.373	ENSJJAG00000012460	-	100	78.229	Jaculus_jaculus
ENSBTAG00000004290	DDX28	96	46.780	ENSKMAG00000018183	ddx28	90	47.656	Kryptolebias_marmoratus
ENSBTAG00000004290	DDX28	93	48.249	ENSLBEG00000006072	ddx28	90	48.249	Labrus_bergylta
ENSBTAG00000004290	DDX28	92	54.348	ENSLACG00000005578	DDX28	87	54.348	Latimeria_chalumnae
ENSBTAG00000004290	DDX28	92	52.132	ENSLOCG00000017604	ddx28	90	52.132	Lepisosteus_oculatus
ENSBTAG00000004290	DDX28	94	86.381	ENSLAFG00000031239	DDX28	100	85.370	Loxodonta_africana
ENSBTAG00000004290	DDX28	99	82.375	ENSMMUG00000010836	DDX28	99	82.375	Macaca_mulatta
ENSBTAG00000004290	DDX28	92	48.743	ENSMAMG00000020220	ddx28	89	48.444	Mastacembelus_armatus
ENSBTAG00000004290	DDX28	92	49.023	ENSMZEG00005009292	ddx28	89	49.023	Maylandia_zebra
ENSBTAG00000004290	DDX28	95	71.017	ENSMICG00000012346	-	99	71.296	Microcebus_murinus
ENSBTAG00000004290	DDX28	99	81.076	ENSMOCG00000009815	Ddx28	99	81.076	Microtus_ochrogaster
ENSBTAG00000004290	DDX28	94	48.944	ENSMMOG00000000270	ddx28	92	48.944	Mola_mola
ENSBTAG00000004290	DDX28	94	72.868	ENSMODG00000005303	DDX28	94	72.780	Monodelphis_domestica
ENSBTAG00000004290	DDX28	94	49.136	ENSMALG00000008864	ddx28	90	49.136	Monopterus_albus
ENSBTAG00000004290	DDX28	99	80.741	MGP_CAROLIEiJ_G0031510	Ddx28	96	80.998	Mus_caroli
ENSBTAG00000004290	DDX28	95	82.115	ENSMUSG00000045538	Ddx28	96	81.958	Mus_musculus
ENSBTAG00000004290	DDX28	99	81.447	MGP_PahariEiJ_G0023110	Ddx28	96	81.574	Mus_pahari
ENSBTAG00000004290	DDX28	96	81.766	MGP_SPRETEiJ_G0032628	Ddx28	96	81.766	Mus_spretus
ENSBTAG00000004290	DDX28	74	85.608	ENSMPUG00000006915	DDX28	100	85.608	Mustela_putorius_furo
ENSBTAG00000004290	DDX28	97	84.717	ENSMLUG00000005899	DDX28	98	84.717	Myotis_lucifugus
ENSBTAG00000004290	DDX28	98	82.309	ENSNGAG00000015762	Ddx28	99	82.495	Nannospalax_galili
ENSBTAG00000004290	DDX28	92	48.828	ENSNBRG00000001337	ddx28	91	48.828	Neolamprologus_brichardi
ENSBTAG00000004290	DDX28	92	49.414	ENSONIG00000020597	ddx28	90	49.414	Oreochromis_niloticus
ENSBTAG00000004290	DDX28	55	62.081	ENSOANG00000003551	-	100	62.081	Ornithorhynchus_anatinus
ENSBTAG00000004290	DDX28	98	83.955	ENSOCUG00000023074	DDX28	99	83.955	Oryctolagus_cuniculus
ENSBTAG00000004290	DDX28	93	49.808	ENSORLG00000011968	ddx28	92	49.808	Oryzias_latipes
ENSBTAG00000004290	DDX28	93	49.711	ENSORLG00020001951	ddx28	92	49.711	Oryzias_latipes_hni
ENSBTAG00000004290	DDX28	93	48.940	ENSORLG00015023030	ddx28	93	48.846	Oryzias_latipes_hsok
ENSBTAG00000004290	DDX28	93	49.516	ENSOMEG00000012445	ddx28	90	49.516	Oryzias_melastigma
ENSBTAG00000004290	DDX28	97	83.491	ENSOGAG00000016895	DDX28	99	83.333	Otolemur_garnettii
ENSBTAG00000004290	DDX28	82	92.360	ENSOARG00000003313	DDX28	100	92.360	Ovis_aries
ENSBTAG00000004290	DDX28	99	81.852	ENSPPAG00000036971	DDX28	100	81.852	Pan_paniscus
ENSBTAG00000004290	DDX28	99	88.312	ENSPPRG00000018322	DDX28	96	89.231	Panthera_pardus
ENSBTAG00000004290	DDX28	99	84.972	ENSPTIG00000006444	DDX28	96	85.769	Panthera_tigris_altaica
ENSBTAG00000004290	DDX28	99	85.185	ENSPTRG00000008258	DDX28	100	85.185	Pan_troglodytes
ENSBTAG00000004290	DDX28	92	51.367	ENSPKIG00000021200	ddx28	92	51.367	Paramormyrops_kingsleyae
ENSBTAG00000004290	DDX28	56	61.716	ENSPSIG00000001127	DDX28	99	61.130	Pelodiscus_sinensis
ENSBTAG00000004290	DDX28	91	46.078	ENSPMGG00000007908	ddx28	88	46.078	Periophthalmus_magnuspinnatus
ENSBTAG00000004290	DDX28	99	80.407	ENSPEMG00000003395	Ddx28	96	81.071	Peromyscus_maniculatus_bairdii
ENSBTAG00000004290	DDX28	54	49.153	ENSPMAG00000006983	DDX28	97	49.153	Petromyzon_marinus
ENSBTAG00000004290	DDX28	93	49.326	ENSPFOG00000020838	DDX28	90	49.326	Poecilia_formosa
ENSBTAG00000004290	DDX28	93	49.326	ENSPFOG00000020952	ddx28	89	49.326	Poecilia_formosa
ENSBTAG00000004290	DDX28	93	49.133	ENSPLAG00000016292	ddx28	89	49.133	Poecilia_latipinna
ENSBTAG00000004290	DDX28	93	49.326	ENSPMEG00000011311	ddx28	88	49.326	Poecilia_mexicana
ENSBTAG00000004290	DDX28	93	49.126	ENSPREG00000002899	ddx28	88	49.126	Poecilia_reticulata
ENSBTAG00000004290	DDX28	99	85.316	ENSPPYG00000007481	DDX28	100	85.316	Pongo_abelii
ENSBTAG00000004290	DDX28	99	86.506	ENSPCOG00000024632	DDX28	100	86.506	Propithecus_coquereli
ENSBTAG00000004290	DDX28	92	49.023	ENSPNYG00000018804	ddx28	89	49.023	Pundamilia_nyererei
ENSBTAG00000004290	DDX28	91	50.489	ENSPNAG00000014597	ddx28	93	50.489	Pygocentrus_nattereri
ENSBTAG00000004290	DDX28	99	79.777	ENSRNOG00000019817	Ddx28	96	80.000	Rattus_norvegicus
ENSBTAG00000004290	DDX28	92	50.485	ENSSFOG00015010181	ddx28	92	50.485	Scleropages_formosus
ENSBTAG00000004290	DDX28	90	49.603	ENSSMAG00000006831	ddx28	92	49.603	Scophthalmus_maximus
ENSBTAG00000004290	DDX28	92	47.758	ENSSDUG00000003257	ddx28	89	47.758	Seriola_dumerili
ENSBTAG00000004290	DDX28	92	47.358	ENSSLDG00000004513	ddx28	89	47.358	Seriola_lalandi_dorsalis
ENSBTAG00000004290	DDX28	99	82.593	ENSSARG00000014169	DDX28	100	82.593	Sorex_araneus
ENSBTAG00000004290	DDX28	97	48.231	ENSSPAG00000000988	ddx28	90	49.612	Stegastes_partitus
ENSBTAG00000004290	DDX28	99	92.222	ENSSSCG00000026038	DDX28	100	92.222	Sus_scrofa
ENSBTAG00000004290	DDX28	96	48.282	ENSTRUG00000007815	ddx28	94	48.184	Takifugu_rubripes
ENSBTAG00000004290	DDX28	93	48.718	ENSTNIG00000011352	ddx28	99	48.718	Tetraodon_nigroviridis
ENSBTAG00000004290	DDX28	86	89.954	ENSTBEG00000017695	DDX28	87	89.954	Tupaia_belangeri
ENSBTAG00000004290	DDX28	99	88.683	ENSUAMG00000016116	DDX28	99	88.683	Ursus_americanus
ENSBTAG00000004290	DDX28	89	83.678	ENSUMAG00000019200	DDX28	97	83.678	Ursus_maritimus
ENSBTAG00000004290	DDX28	80	83.790	ENSVVUG00000012876	DDX28	87	83.790	Vulpes_vulpes
ENSBTAG00000004290	DDX28	93	50.196	ENSXETG00000005435	ddx28	99	50.491	Xenopus_tropicalis
ENSBTAG00000004290	DDX28	93	49.228	ENSXCOG00000012364	ddx28	90	49.228	Xiphophorus_couchianus
ENSBTAG00000004290	DDX28	92	49.608	ENSXMAG00000019603	ddx28	91	49.608	Xiphophorus_maculatus