EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000004376 (Gene tree)
Gene ID: 538820
Gene Symbol: PAN2
Alias: USP52
Full Name: Bos taurus poly(A) specific ribonuclease subunit PAN2 (PAN2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 13845 bases
Position: chr5:57015019-57028863
Accession: NM_001079610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000053637	RNase_T	PF00929.24	3.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000061314	-	4443	XM_005206648	ENSBTAP00000053637	1198 (aa)	XP_005206705	E1BML0

Gene Model

Click here to download ENSBTAG00000004376's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000004376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000004376	PAN2	100	75.452	ENSAPOG00000022955	pan2	100	75.207	Acanthochromis_polyacanthus
ENSBTAG00000004376	PAN2	100	98.336	ENSAMEG00000003824	PAN2	100	98.336	Ailuropoda_melanoleuca
ENSBTAG00000004376	PAN2	94	82.967	ENSACIG00000013079	pan2	99	75.000	Amphilophus_citrinellus
ENSBTAG00000004376	PAN2	99	60.892	ENSACIG00000012858	PAN2	99	60.892	Amphilophus_citrinellus
ENSBTAG00000004376	PAN2	100	75.288	ENSAOCG00000022334	pan2	99	75.288	Amphiprion_ocellaris
ENSBTAG00000004376	PAN2	100	75.431	ENSAPEG00000022760	pan2	99	75.431	Amphiprion_percula
ENSBTAG00000004376	PAN2	99	75.456	ENSATEG00000024030	pan2	100	75.685	Anabas_testudineus
ENSBTAG00000004376	PAN2	94	86.210	ENSAPLG00000005195	PAN2	100	86.210	Anas_platyrhynchos
ENSBTAG00000004376	PAN2	100	84.750	ENSACAG00000007067	PAN2	100	84.750	Anolis_carolinensis
ENSBTAG00000004376	PAN2	100	98.164	ENSANAG00000036468	PAN2	100	98.164	Aotus_nancymaae
ENSBTAG00000004376	PAN2	98	60.169	ENSACLG00000023821	pan2	99	60.085	Astatotilapia_calliptera
ENSBTAG00000004376	PAN2	100	75.638	ENSACLG00000023674	pan2	99	75.707	Astatotilapia_calliptera
ENSBTAG00000004376	PAN2	99	75.229	ENSAMXG00000005418	pan2	98	75.229	Astyanax_mexicanus
ENSBTAG00000004376	PAN2	100	97.837	ENSCJAG00000011141	PAN2	100	97.837	Callithrix_jacchus
ENSBTAG00000004376	PAN2	100	98.080	ENSCAFG00000000119	PAN2	100	98.080	Canis_familiaris
ENSBTAG00000004376	PAN2	100	96.865	ENSCAFG00020024865	PAN2	100	96.865	Canis_lupus_dingo
ENSBTAG00000004376	PAN2	100	98.343	ENSCHIG00000026935	PAN2	100	98.343	Capra_hircus
ENSBTAG00000004376	PAN2	100	96.852	ENSTSYG00000006927	PAN2	100	97.025	Carlito_syrichta
ENSBTAG00000004376	PAN2	100	95.851	ENSCPOG00000014918	PAN2	100	95.851	Cavia_porcellus
ENSBTAG00000004376	PAN2	100	98.087	ENSCCAG00000036637	PAN2	100	98.087	Cebus_capucinus
ENSBTAG00000004376	PAN2	100	98.414	ENSCATG00000045076	PAN2	100	98.414	Cercocebus_atys
ENSBTAG00000004376	PAN2	100	95.851	ENSCLAG00000011700	PAN2	100	95.851	Chinchilla_lanigera
ENSBTAG00000004376	PAN2	100	97.754	ENSCSAG00000005173	PAN2	100	97.754	Chlorocebus_sabaeus
ENSBTAG00000004376	PAN2	100	86.012	ENSCPBG00000014029	PAN2	100	86.178	Chrysemys_picta_bellii
ENSBTAG00000004376	PAN2	91	46.410	ENSCSAVG00000003833	-	97	62.099	Ciona_savignyi
ENSBTAG00000004376	PAN2	100	95.428	ENSCANG00000017798	PAN2	100	95.428	Colobus_angolensis_palliatus
ENSBTAG00000004376	PAN2	100	96.494	ENSCGRG00001019707	Pan2	100	96.494	Cricetulus_griseus_chok1gshd
ENSBTAG00000004376	PAN2	100	95.360	ENSCGRG00000009996	Pan2	100	95.360	Cricetulus_griseus_crigri
ENSBTAG00000004376	PAN2	100	71.440	ENSCSEG00000021529	pan2	99	71.667	Cynoglossus_semilaevis
ENSBTAG00000004376	PAN2	100	75.537	ENSCVAG00000010197	pan2	100	75.537	Cyprinodon_variegatus
ENSBTAG00000004376	PAN2	100	74.752	ENSDARG00000074675	pan2	99	74.917	Danio_rerio
ENSBTAG00000004376	PAN2	100	97.329	ENSDNOG00000010940	PAN2	100	97.329	Dasypus_novemcinctus
ENSBTAG00000004376	PAN2	93	41.181	FBgn0033352	PAN2	96	41.181	Drosophila_melanogaster
ENSBTAG00000004376	PAN2	75	96.639	ENSETEG00000012041	PAN2	82	96.639	Echinops_telfairi
ENSBTAG00000004376	PAN2	98	59.303	ENSEBUG00000002773	pan2	98	59.303	Eptatretus_burgeri
ENSBTAG00000004376	PAN2	100	98.099	ENSEASG00005005235	PAN2	100	98.099	Equus_asinus_asinus
ENSBTAG00000004376	PAN2	100	99.082	ENSECAG00000019814	PAN2	100	99.082	Equus_caballus
ENSBTAG00000004376	PAN2	99	74.773	ENSELUG00000024604	pan2	99	75.021	Esox_lucius
ENSBTAG00000004376	PAN2	100	98.253	ENSFCAG00000012021	PAN2	100	98.253	Felis_catus
ENSBTAG00000004376	PAN2	99	84.706	ENSFALG00000000464	PAN2	98	84.874	Ficedula_albicollis
ENSBTAG00000004376	PAN2	100	96.023	ENSFDAG00000017104	PAN2	100	96.023	Fukomys_damarensis
ENSBTAG00000004376	PAN2	90	76.035	ENSFHEG00000000157	pan2	96	76.035	Fundulus_heteroclitus
ENSBTAG00000004376	PAN2	100	74.135	ENSGMOG00000007249	pan2	99	74.135	Gadus_morhua
ENSBTAG00000004376	PAN2	100	86.012	ENSGALG00000031512	PAN2	100	86.012	Gallus_gallus
ENSBTAG00000004376	PAN2	100	76.076	ENSGAFG00000000284	pan2	100	76.076	Gambusia_affinis
ENSBTAG00000004376	PAN2	100	74.733	ENSGACG00000010722	pan2	99	74.610	Gasterosteus_aculeatus
ENSBTAG00000004376	PAN2	100	85.679	ENSGAGG00000007868	PAN2	100	85.845	Gopherus_agassizii
ENSBTAG00000004376	PAN2	100	97.671	ENSGGOG00000009115	PAN2	100	97.671	Gorilla_gorilla
ENSBTAG00000004376	PAN2	100	75.413	ENSHBUG00000005234	pan2	99	75.624	Haplochromis_burtoni
ENSBTAG00000004376	PAN2	99	95.823	ENSHGLG00000005647	PAN2	99	95.823	Heterocephalus_glaber_female
ENSBTAG00000004376	PAN2	99	95.572	ENSHGLG00100014057	PAN2	99	95.572	Heterocephalus_glaber_male
ENSBTAG00000004376	PAN2	100	74.897	ENSHCOG00000007920	pan2	99	74.897	Hippocampus_comes
ENSBTAG00000004376	PAN2	100	75.186	ENSIPUG00000011065	PAN2	99	75.186	Ictalurus_punctatus
ENSBTAG00000004376	PAN2	94	99.367	ENSSTOG00000015974	PAN2	100	99.367	Ictidomys_tridecemlineatus
ENSBTAG00000004376	PAN2	99	96.477	ENSJJAG00000013044	Pan2	97	96.477	Jaculus_jaculus
ENSBTAG00000004376	PAN2	100	75.371	ENSKMAG00000006192	pan2	99	75.453	Kryptolebias_marmoratus
ENSBTAG00000004376	PAN2	94	80.392	ENSLBEG00000015763	pan2	99	80.392	Labrus_bergylta
ENSBTAG00000004376	PAN2	100	72.749	ENSLACG00000018694	PAN2	100	72.830	Latimeria_chalumnae
ENSBTAG00000004376	PAN2	100	76.790	ENSLOCG00000004333	pan2	99	76.955	Lepisosteus_oculatus
ENSBTAG00000004376	PAN2	100	95.681	ENSLAFG00000014873	PAN2	100	95.681	Loxodonta_africana
ENSBTAG00000004376	PAN2	100	98.164	ENSMFAG00000002293	PAN2	100	98.164	Macaca_fascicularis
ENSBTAG00000004376	PAN2	100	98.164	ENSMMUG00000013482	PAN2	100	98.164	Macaca_mulatta
ENSBTAG00000004376	PAN2	100	98.414	ENSMNEG00000033264	PAN2	100	98.414	Macaca_nemestrina
ENSBTAG00000004376	PAN2	100	98.331	ENSMLEG00000037388	PAN2	100	98.331	Mandrillus_leucophaeus
ENSBTAG00000004376	PAN2	100	76.277	ENSMAMG00000001624	pan2	100	76.277	Mastacembelus_armatus
ENSBTAG00000004376	PAN2	100	75.638	ENSMZEG00005026462	pan2	99	75.707	Maylandia_zebra
ENSBTAG00000004376	PAN2	98	61.017	ENSMZEG00005026472	pan2	99	59.949	Maylandia_zebra
ENSBTAG00000004376	PAN2	97	86.379	ENSMGAG00000001439	PAN2	100	86.379	Meleagris_gallopavo
ENSBTAG00000004376	PAN2	99	95.819	ENSMAUG00000012602	Pan2	99	95.819	Mesocricetus_auratus
ENSBTAG00000004376	PAN2	100	98.247	ENSMICG00000017661	PAN2	100	98.247	Microcebus_murinus
ENSBTAG00000004376	PAN2	100	95.492	ENSMOCG00000007191	Pan2	100	95.492	Microtus_ochrogaster
ENSBTAG00000004376	PAN2	99	75.250	ENSMMOG00000009313	pan2	98	75.437	Mola_mola
ENSBTAG00000004376	PAN2	100	75.842	ENSMALG00000013377	pan2	100	75.842	Monopterus_albus
ENSBTAG00000004376	PAN2	100	95.353	MGP_CAROLIEiJ_G0015930	Pan2	100	95.353	Mus_caroli
ENSBTAG00000004376	PAN2	100	95.743	ENSMUSG00000005682	Pan2	100	95.743	Mus_musculus
ENSBTAG00000004376	PAN2	100	95.519	MGP_PahariEiJ_G0031154	Pan2	100	95.519	Mus_pahari
ENSBTAG00000004376	PAN2	100	95.826	MGP_SPRETEiJ_G0016755	Pan2	100	95.826	Mus_spretus
ENSBTAG00000004376	PAN2	100	98.915	ENSMPUG00000001383	PAN2	100	98.915	Mustela_putorius_furo
ENSBTAG00000004376	PAN2	100	97.997	ENSMLUG00000006737	PAN2	100	97.997	Myotis_lucifugus
ENSBTAG00000004376	PAN2	100	96.506	ENSNGAG00000007930	Pan2	100	96.506	Nannospalax_galili
ENSBTAG00000004376	PAN2	92	86.364	ENSNBRG00000006585	pan2	99	86.364	Neolamprologus_brichardi
ENSBTAG00000004376	PAN2	100	92.123	ENSNLEG00000017499	PAN2	100	97.483	Nomascus_leucogenys
ENSBTAG00000004376	PAN2	100	92.180	ENSMEUG00000010125	PAN2	100	92.180	Notamacropus_eugenii
ENSBTAG00000004376	PAN2	100	96.598	ENSOPRG00000001468	PAN2	100	96.598	Ochotona_princeps
ENSBTAG00000004376	PAN2	100	95.530	ENSODEG00000007203	PAN2	100	95.530	Octodon_degus
ENSBTAG00000004376	PAN2	100	75.307	ENSONIG00000016732	pan2	100	75.307	Oreochromis_niloticus
ENSBTAG00000004376	PAN2	81	74.122	ENSOANG00000005151	PAN2	99	74.223	Ornithorhynchus_anatinus
ENSBTAG00000004376	PAN2	100	96.517	ENSOCUG00000007227	PAN2	100	96.517	Oryctolagus_cuniculus
ENSBTAG00000004376	PAN2	100	74.979	ENSORLG00000015195	pan2	100	74.979	Oryzias_latipes
ENSBTAG00000004376	PAN2	100	75.062	ENSORLG00020000277	pan2	100	75.062	Oryzias_latipes_hni
ENSBTAG00000004376	PAN2	100	74.979	ENSORLG00015005193	pan2	100	74.979	Oryzias_latipes_hsok
ENSBTAG00000004376	PAN2	100	75.473	ENSOMEG00000022087	pan2	98	78.756	Oryzias_melastigma
ENSBTAG00000004376	PAN2	100	96.689	ENSOGAG00000030620	PAN2	100	96.689	Otolemur_garnettii
ENSBTAG00000004376	PAN2	100	99.251	ENSOARG00000009379	PAN2	100	99.251	Ovis_aries
ENSBTAG00000004376	PAN2	100	98.080	ENSPPAG00000001208	PAN2	100	98.080	Pan_paniscus
ENSBTAG00000004376	PAN2	100	98.336	ENSPPRG00000021586	PAN2	100	98.336	Panthera_pardus
ENSBTAG00000004376	PAN2	100	94.458	ENSPTIG00000012494	PAN2	100	94.458	Panthera_tigris_altaica
ENSBTAG00000004376	PAN2	100	98.080	ENSPTRG00000052054	PAN2	100	98.080	Pan_troglodytes
ENSBTAG00000004376	PAN2	92	97.834	ENSPANG00000018906	PAN2	100	97.834	Papio_anubis
ENSBTAG00000004376	PAN2	100	75.680	ENSPKIG00000003973	pan2	99	75.680	Paramormyrops_kingsleyae
ENSBTAG00000004376	PAN2	100	82.627	ENSPSIG00000003267	PAN2	100	82.627	Pelodiscus_sinensis
ENSBTAG00000004376	PAN2	100	75.000	ENSPMGG00000023186	pan2	100	75.000	Periophthalmus_magnuspinnatus
ENSBTAG00000004376	PAN2	100	95.029	ENSPEMG00000018505	Pan2	100	95.029	Peromyscus_maniculatus_bairdii
ENSBTAG00000004376	PAN2	91	69.132	ENSPMAG00000004731	pan2	100	69.132	Petromyzon_marinus
ENSBTAG00000004376	PAN2	100	92.596	ENSPCIG00000024643	PAN2	100	92.596	Phascolarctos_cinereus
ENSBTAG00000004376	PAN2	100	75.700	ENSPFOG00000008392	pan2	99	75.700	Poecilia_formosa
ENSBTAG00000004376	PAN2	100	75.618	ENSPLAG00000009198	pan2	99	75.618	Poecilia_latipinna
ENSBTAG00000004376	PAN2	100	75.783	ENSPMEG00000001484	pan2	100	75.768	Poecilia_mexicana
ENSBTAG00000004376	PAN2	100	75.745	ENSPREG00000000900	pan2	100	75.745	Poecilia_reticulata
ENSBTAG00000004376	PAN2	89	98.600	ENSPPYG00000004656	PAN2	100	98.600	Pongo_abelii
ENSBTAG00000004376	PAN2	92	97.104	ENSPCAG00000011047	PAN2	99	97.104	Procavia_capensis
ENSBTAG00000004376	PAN2	100	98.080	ENSPCOG00000018263	PAN2	100	98.080	Propithecus_coquereli
ENSBTAG00000004376	PAN2	94	98.667	ENSPVAG00000007591	PAN2	94	98.667	Pteropus_vampyrus
ENSBTAG00000004376	PAN2	99	75.790	ENSPNYG00000002629	pan2	99	75.790	Pundamilia_nyererei
ENSBTAG00000004376	PAN2	100	76.694	ENSPNAG00000027140	pan2	99	76.694	Pygocentrus_nattereri
ENSBTAG00000004376	PAN2	100	95.409	ENSRNOG00000032441	Pan2	100	95.409	Rattus_norvegicus
ENSBTAG00000004376	PAN2	100	97.997	ENSRBIG00000029591	PAN2	100	97.997	Rhinopithecus_bieti
ENSBTAG00000004376	PAN2	100	97.913	ENSRROG00000041950	PAN2	100	97.913	Rhinopithecus_roxellana
ENSBTAG00000004376	PAN2	100	98.164	ENSSBOG00000027343	PAN2	100	98.164	Saimiri_boliviensis_boliviensis
ENSBTAG00000004376	PAN2	92	91.137	ENSSHAG00000000122	PAN2	100	92.004	Sarcophilus_harrisii
ENSBTAG00000004376	PAN2	99	76.490	ENSSFOG00015017740	pan2	99	76.490	Scleropages_formosus
ENSBTAG00000004376	PAN2	100	74.672	ENSSMAG00000020901	pan2	100	74.670	Scophthalmus_maximus
ENSBTAG00000004376	PAN2	100	75.698	ENSSDUG00000001840	pan2	99	75.924	Seriola_dumerili
ENSBTAG00000004376	PAN2	100	75.805	ENSSLDG00000013866	pan2	100	75.805	Seriola_lalandi_dorsalis
ENSBTAG00000004376	PAN2	92	96.409	ENSSARG00000013350	PAN2	92	96.409	Sorex_araneus
ENSBTAG00000004376	PAN2	92	85.185	ENSSPUG00000004270	PAN2	99	85.366	Sphenodon_punctatus
ENSBTAG00000004376	PAN2	100	75.452	ENSSPAG00000019970	pan2	100	75.369	Stegastes_partitus
ENSBTAG00000004376	PAN2	100	98.664	ENSSSCG00000000393	PAN2	100	98.664	Sus_scrofa
ENSBTAG00000004376	PAN2	100	75.329	ENSTRUG00000014260	pan2	99	75.329	Takifugu_rubripes
ENSBTAG00000004376	PAN2	100	75.431	ENSTNIG00000012537	pan2	99	75.493	Tetraodon_nigroviridis
ENSBTAG00000004376	PAN2	80	98.131	ENSTTRG00000007150	PAN2	80	98.131	Tursiops_truncatus
ENSBTAG00000004376	PAN2	100	98.421	ENSUAMG00000026522	PAN2	100	98.421	Ursus_americanus
ENSBTAG00000004376	PAN2	100	98.094	ENSUMAG00000017020	PAN2	100	98.094	Ursus_maritimus
ENSBTAG00000004376	PAN2	78	98.030	ENSVPAG00000007309	PAN2	85	98.030	Vicugna_pacos
ENSBTAG00000004376	PAN2	100	97.997	ENSVVUG00000021878	PAN2	100	97.997	Vulpes_vulpes
ENSBTAG00000004376	PAN2	99	79.617	ENSXETG00000009434	pan2	100	79.831	Xenopus_tropicalis
ENSBTAG00000004376	PAN2	100	71.854	ENSXCOG00000014391	pan2	100	71.854	Xiphophorus_couchianus
ENSBTAG00000004376	PAN2	100	75.618	ENSXMAG00000011661	pan2	100	75.414	Xiphophorus_maculatus