EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSBTAG00000004406 (Gene tree)
Gene ID
505542
Gene Symbol
MSI2
Alias
-
Full Name
musashi RNA binding protein 2
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
400460 bases
Position
chr19:8092267-8492726
Accession
18585
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000061405RRM_1PF00076.224.2e-3412
ENSBTAP00000061405RRM_1PF00076.224.2e-3422
ENSBTAP00000063649RRM_1PF00076.224.3e-3412
ENSBTAP00000063649RRM_1PF00076.224.3e-3422
ENSBTAP00000069155RRM_1PF00076.224.3e-3412
ENSBTAP00000069155RRM_1PF00076.224.3e-3422
ENSBTAP00000062593RRM_1PF00076.224.4e-3412
ENSBTAP00000062593RRM_1PF00076.224.4e-3422
ENSBTAP00000069932RRM_1PF00076.225.5e-3412
ENSBTAP00000069932RRM_1PF00076.225.5e-3422
ENSBTAP00000059519RRM_1PF00076.226.2e-3412
ENSBTAP00000059519RRM_1PF00076.226.2e-3422
ENSBTAP00000005780RRM_1PF00076.221.3e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000084828MSI2-2041345-ENSBTAP00000069932341 (aa)--
ENSBTAT00000076574MSI2-2011294-ENSBTAP00000063649324 (aa)-UPI000383B53C
ENSBTAT00000067884MSI2-2031408-ENSBTAP00000059519362 (aa)--
ENSBTAT00000005780MSI2-207786-ENSBTAP00000005780261 (aa)-F1MSL5
ENSBTAT00000071763MSI2-2052282-ENSBTAP00000061405320 (aa)--
ENSBTAT00000074219MSI2-2061991-ENSBTAP00000062593324 (aa)--
ENSBTAT00000080482MSI2-2021325-ENSBTAP00000069155324 (aa)-UPI0001D57A87
Gene Model
Click here to download ENSBTAG00000004406's gene model file
Pathways
Pathway IDPathway NameSource
bta03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000004406's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000004406MSI25336.364ENSBTAG00000045772-5635.377
ENSBTAG00000004406MSI25233.557ENSBTAG00000003697TARDBP5432.544
ENSBTAG00000004406MSI25250.000ENSBTAG00000052568-6947.191
ENSBTAG00000004406MSI25441.279ENSBTAG00000021755-7936.992
ENSBTAG00000004406MSI29774.224ENSBTAG00000009800MSI110072.981
ENSBTAG00000004406MSI25443.023ENSBTAG00000001553HNRNPA18637.634
ENSBTAG00000004406MSI25736.066ENSBTAG00000011195-7134.444
ENSBTAG00000004406MSI25444.186ENSBTAG00000021580HNRNPA36840.873
ENSBTAG00000004406MSI25637.696ENSBTAG00000052891-7140.000
ENSBTAG00000004406MSI25442.442ENSBTAG00000006815-5941.209
ENSBTAG00000004406MSI25343.529ENSBTAG00000016929HNRNPA08936.042
ENSBTAG00000004406MSI25436.628ENSBTAG00000038680-5236.628
ENSBTAG00000004406MSI25244.595ENSBTAG00000007480CIRBP8542.857
ENSBTAG00000004406MSI25336.709ENSBTAG00000051697-5036.709
ENSBTAG00000004406MSI25641.579ENSBTAG00000019714DAZAP15141.579
ENSBTAG00000004406MSI25443.605ENSBTAG00000045937-5443.478
ENSBTAG00000004406MSI25848.295ENSBTAG00000014804HNRNPDL6939.057
ENSBTAG00000004406MSI25143.182ENSBTAG00000054428-8643.182
ENSBTAG00000004406MSI25848.663ENSBTAG00000013627HNRNPAB6748.205
ENSBTAG00000004406MSI25441.279ENSBTAG00000005726HNRNPA2B18540.230
ENSBTAG00000004406MSI26245.894ENSBTAG00000013952HNRNPD6346.701
ENSBTAG00000004406MSI25538.068ENSBTAG00000048345-6338.068
ENSBTAG00000004406MSI25339.157ENSBTAG00000054873-7339.157
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000004406MSI29899.111ENSG00000153944MSI29798.354Homo_sapiens
ENSBTAG00000004406MSI29494.348ENSAPOG00000001658msi2a9888.961Acanthochromis_polyacanthus
ENSBTAG00000004406MSI29794.172ENSAMEG00000002697MSI210094.172Ailuropoda_melanoleuca
ENSBTAG00000004406MSI27989.908ENSACIG00000009475msi2a8186.000Amphilophus_citrinellus
ENSBTAG00000004406MSI25974.000ENSAOCG00000014822msi2a6480.000Amphiprion_ocellaris
ENSBTAG00000004406MSI29490.099ENSAPEG00000007706msi2a9888.961Amphiprion_percula
ENSBTAG00000004406MSI29793.525ENSATEG00000003301-10093.525Anabas_testudineus
ENSBTAG00000004406MSI29494.348ENSATEG00000010498msi2a9888.961Anabas_testudineus
ENSBTAG00000004406MSI29397.826ENSACAG00000005452MSI27493.939Anolis_carolinensis
ENSBTAG00000004406MSI29799.674ENSANAG00000037827MSI29699.167Aotus_nancymaae
ENSBTAG00000004406MSI29493.913ENSACLG00000007752msi2a9888.636Astatotilapia_calliptera
ENSBTAG00000004406MSI210094.444ENSAMXG00000010474msi2b10094.444Astyanax_mexicanus
ENSBTAG00000004406MSI29794.805ENSAMXG00000032796msi2a9492.857Astyanax_mexicanus
ENSBTAG00000004406MSI27261.290WBGene00003423msi-17562.083Caenorhabditis_elegans
ENSBTAG00000004406MSI29799.674ENSCJAG00000013998MSI29699.167Callithrix_jacchus
ENSBTAG00000004406MSI29792.790ENSCAFG00020025620MSI28192.790Canis_lupus_dingo
ENSBTAG00000004406MSI29799.349ENSCHIG00000016580MSI29499.349Capra_hircus
ENSBTAG00000004406MSI29795.035ENSCPOG00000034042MSI29995.035Cavia_porcellus
ENSBTAG00000004406MSI29799.674ENSCCAG00000033927MSI29699.167Cebus_capucinus
ENSBTAG00000004406MSI29999.111ENSCATG00000040879MSI29699.167Cercocebus_atys
ENSBTAG00000004406MSI29794.154ENSCLAG00000014325MSI29494.154Chinchilla_lanigera
ENSBTAG00000004406MSI29799.674ENSCSAG00000005633MSI29499.674Chlorocebus_sabaeus
ENSBTAG00000004406MSI27498.039ENSCHOG00000008660MSI28398.039Choloepus_hoffmanni
ENSBTAG00000004406MSI29799.015ENSCPBG00000009942MSI29591.386Chrysemys_picta_bellii
ENSBTAG00000004406MSI29054.634ENSCING00000018579-9753.125Ciona_intestinalis
ENSBTAG00000004406MSI26866.216ENSCSAVG00000010397-7265.517Ciona_savignyi
ENSBTAG00000004406MSI29999.111ENSCANG00000036414MSI29699.167Colobus_angolensis_palliatus
ENSBTAG00000004406MSI29799.351ENSCGRG00001013330Msi29499.351Cricetulus_griseus_chok1gshd
ENSBTAG00000004406MSI29793.976ENSCGRG00000003141Msi210093.976Cricetulus_griseus_crigri
ENSBTAG00000004406MSI29783.838ENSCSEG00000003266-9283.838Cynoglossus_semilaevis
ENSBTAG00000004406MSI27974.742ENSCSEG00000013557msi2a8373.196Cynoglossus_semilaevis
ENSBTAG00000004406MSI25871.196ENSCSEG00000013549msi2a10071.196Cynoglossus_semilaevis
ENSBTAG00000004406MSI29786.319ENSCVAG00000017075msi2a9788.435Cyprinodon_variegatus
ENSBTAG00000004406MSI28994.700ENSDARG00000032614msi2b10098.020Danio_rerio
ENSBTAG00000004406MSI28294.144ENSDARG00000033901msi2a9576.839Danio_rerio
ENSBTAG00000004406MSI29799.653ENSDNOG00000014501MSI210099.653Dasypus_novemcinctus
ENSBTAG00000004406MSI27988.325ENSDORG00000005394Msi28487.310Dipodomys_ordii
ENSBTAG00000004406MSI253100.000ENSDORG00000028440-100100.000Dipodomys_ordii
ENSBTAG00000004406MSI29757.925FBgn0260943Rbp68868.750Drosophila_melanogaster
ENSBTAG00000004406MSI27176.316ENSETEG00000012450-6476.316Echinops_telfairi
ENSBTAG00000004406MSI28965.916ENSEBUG00000006732msi2a8764.952Eptatretus_burgeri
ENSBTAG00000004406MSI2100100.000ENSEASG00005002965MSI210095.469Equus_asinus_asinus
ENSBTAG00000004406MSI29798.261ENSECAG00000011435MSI29096.610Equus_caballus
ENSBTAG00000004406MSI28384.980ENSEEUG00000007810MSI210084.980Erinaceus_europaeus
ENSBTAG00000004406MSI29787.859ENSELUG00000001361msi2b9387.859Esox_lucius
ENSBTAG00000004406MSI29794.178ENSELUG00000011747msi2a9394.178Esox_lucius
ENSBTAG00000004406MSI25877.564ENSFCAG00000033787-8277.564Felis_catus
ENSBTAG00000004406MSI29799.674ENSFCAG00000041686MSI29699.167Felis_catus
ENSBTAG00000004406MSI29794.154ENSFDAG00000016118MSI210094.154Fukomys_damarensis
ENSBTAG00000004406MSI29494.348ENSFHEG00000000084msi2a9690.789Fundulus_heteroclitus
ENSBTAG00000004406MSI25096.386ENSGMOG00000007596-10090.385Gadus_morhua
ENSBTAG00000004406MSI29792.615ENSGALG00000005567MSI29492.615Gallus_gallus
ENSBTAG00000004406MSI28981.633ENSGAFG00000006974msi2a9091.391Gambusia_affinis
ENSBTAG00000004406MSI29795.021ENSGAGG00000016542MSI210089.803Gopherus_agassizii
ENSBTAG00000004406MSI29899.111ENSGGOG00000013182MSI29798.354Gorilla_gorilla
ENSBTAG00000004406MSI29493.913ENSHBUG00000020800msi2a9888.636Haplochromis_burtoni
ENSBTAG00000004406MSI29584.615ENSHGLG00000012444MSI29384.615Heterocephalus_glaber_female
ENSBTAG00000004406MSI253100.000ENSHGLG00100004028-87100.000Heterocephalus_glaber_male
ENSBTAG00000004406MSI27690.821ENSHGLG00100003744MSI210090.821Heterocephalus_glaber_male
ENSBTAG00000004406MSI29186.580ENSHCOG00000017241-6687.619Hippocampus_comes
ENSBTAG00000004406MSI29493.913ENSHCOG00000000266msi2a9184.858Hippocampus_comes
ENSBTAG00000004406MSI29793.836ENSIPUG00000021097msi2a9392.466Ictalurus_punctatus
ENSBTAG00000004406MSI29991.438ENSIPUG00000003732msi2b9391.438Ictalurus_punctatus
ENSBTAG00000004406MSI29795.035ENSSTOG00000007884MSI29995.035Ictidomys_tridecemlineatus
ENSBTAG00000004406MSI253100.000ENSJJAG00000009467-100100.000Jaculus_jaculus
ENSBTAG00000004406MSI27685.427ENSJJAG00000006292-10084.925Jaculus_jaculus
ENSBTAG00000004406MSI29791.205ENSKMAG00000009494msi2a9491.205Kryptolebias_marmoratus
ENSBTAG00000004406MSI28286.010ENSLBEG00000026223-10065.982Labrus_bergylta
ENSBTAG00000004406MSI29494.348ENSLBEG00000007061msi2a9888.961Labrus_bergylta
ENSBTAG00000004406MSI25897.030ENSLACG00000016798MSI210097.030Latimeria_chalumnae
ENSBTAG00000004406MSI28297.297ENSLOCG00000004675msi2b10081.301Lepisosteus_oculatus
ENSBTAG00000004406MSI29999.111ENSMFAG00000003775MSI29699.167Macaca_fascicularis
ENSBTAG00000004406MSI29799.111ENSMMUG00000002069MSI29699.167Macaca_mulatta
ENSBTAG00000004406MSI29999.111ENSMNEG00000045275MSI29699.167Macaca_nemestrina
ENSBTAG00000004406MSI29999.111ENSMLEG00000033888MSI29699.167Mandrillus_leucophaeus
ENSBTAG00000004406MSI29494.783ENSMAMG00000002488-9990.066Mastacembelus_armatus
ENSBTAG00000004406MSI29494.348ENSMAMG00000010503msi2a9886.731Mastacembelus_armatus
ENSBTAG00000004406MSI29792.834ENSMZEG00005007676msi2a9492.834Maylandia_zebra
ENSBTAG00000004406MSI29793.865ENSMAUG00000003862Msi29493.865Mesocricetus_auratus
ENSBTAG00000004406MSI29799.674ENSMICG00000013598-9699.167Microcebus_murinus
ENSBTAG00000004406MSI29777.244ENSMICG00000032913-9378.205Microcebus_murinus
ENSBTAG00000004406MSI29794.154ENSMOCG00000005820Msi29494.154Microtus_ochrogaster
ENSBTAG00000004406MSI29683.923ENSMMOG00000008348msi2a9784.345Mola_mola
ENSBTAG00000004406MSI27689.372ENSMODG00000014790MSI210089.372Monodelphis_domestica
ENSBTAG00000004406MSI29786.645ENSMALG00000000071msi2a9395.455Monopterus_albus
ENSBTAG00000004406MSI29799.674MGP_CAROLIEiJ_G0016948Msi2100100.000Mus_caroli
ENSBTAG00000004406MSI29799.674ENSMUSG00000069769Msi2100100.000Mus_musculus
ENSBTAG00000004406MSI29799.674MGP_PahariEiJ_G0018079Msi2100100.000Mus_pahari
ENSBTAG00000004406MSI29799.674MGP_SPRETEiJ_G0017795Msi2100100.000Mus_spretus
ENSBTAG00000004406MSI210099.691ENSMPUG00000015377MSI210099.691Mustela_putorius_furo
ENSBTAG00000004406MSI210099.074ENSMLUG00000007865MSI210099.074Myotis_lucifugus
ENSBTAG00000004406MSI29794.154ENSNGAG00000017807Msi29494.154Nannospalax_galili
ENSBTAG00000004406MSI29588.636ENSNBRG00000014596msi2a9888.636Neolamprologus_brichardi
ENSBTAG00000004406MSI29799.111ENSNLEG00000008059MSI29698.578Nomascus_leucogenys
ENSBTAG00000004406MSI27188.816ENSOPRG00000000872-6488.816Ochotona_princeps
ENSBTAG00000004406MSI29794.154ENSODEG00000011974MSI29494.154Octodon_degus
ENSBTAG00000004406MSI25991.391ENSONIG00000001972msi2a8491.391Oreochromis_niloticus
ENSBTAG00000004406MSI29198.678ENSOANG00000005667MSI27098.678Ornithorhynchus_anatinus
ENSBTAG00000004406MSI210099.383ENSOCUG00000010440MSI210099.383Oryctolagus_cuniculus
ENSBTAG00000004406MSI29792.808ENSORLG00000009671msi2a9492.808Oryzias_latipes
ENSBTAG00000004406MSI29793.117ENSORLG00020021556msi2a10087.172Oryzias_latipes_hni
ENSBTAG00000004406MSI29792.808ENSORLG00015004592msi2a9492.808Oryzias_latipes_hsok
ENSBTAG00000004406MSI29791.362ENSOMEG00000000146msi2a9891.362Oryzias_melastigma
ENSBTAG00000004406MSI29595.130ENSOGAG00000005621MSI210095.130Otolemur_garnettii
ENSBTAG00000004406MSI29794.136ENSPPAG00000037697MSI29798.354Pan_paniscus
ENSBTAG00000004406MSI29799.674ENSPPRG00000001848MSI29699.167Panthera_pardus
ENSBTAG00000004406MSI27578.099ENSPTIG00000021873-9377.731Panthera_tigris_altaica
ENSBTAG00000004406MSI29793.891ENSPTIG00000021678MSI29693.891Panthera_tigris_altaica
ENSBTAG00000004406MSI29899.111ENSPTRG00000009437MSI29798.354Pan_troglodytes
ENSBTAG00000004406MSI29999.111ENSPANG00000022319MSI29699.167Papio_anubis
ENSBTAG00000004406MSI29391.156ENSPKIG00000007038-9387.333Paramormyrops_kingsleyae
ENSBTAG00000004406MSI25087.912ENSPKIG00000017107-8187.912Paramormyrops_kingsleyae
ENSBTAG00000004406MSI29799.177ENSPSIG00000008618MSI27899.177Pelodiscus_sinensis
ENSBTAG00000004406MSI29489.439ENSPMGG00000005888msi2a9888.312Periophthalmus_magnuspinnatus
ENSBTAG00000004406MSI253100.000ENSPEMG00000021793-100100.000Peromyscus_maniculatus_bairdii
ENSBTAG00000004406MSI29792.357ENSPCIG00000006063MSI29490.390Phascolarctos_cinereus
ENSBTAG00000004406MSI25294.048ENSPFOG00000019337MSI29287.619Poecilia_formosa
ENSBTAG00000004406MSI25987.413ENSPLAG00000000436msi2a7688.028Poecilia_latipinna
ENSBTAG00000004406MSI25976.923ENSPMEG00000013247msi2a6988.288Poecilia_mexicana
ENSBTAG00000004406MSI29494.348ENSPREG00000000881msi2a9786.364Poecilia_reticulata
ENSBTAG00000004406MSI29796.218ENSPPYG00000008244-10096.218Pongo_abelii
ENSBTAG00000004406MSI27479.275ENSPCAG00000010552MSI210070.168Procavia_capensis
ENSBTAG00000004406MSI258100.000ENSPCOG00000019195-100100.000Propithecus_coquereli
ENSBTAG00000004406MSI29790.444ENSPVAG00000017053MSI210090.444Pteropus_vampyrus
ENSBTAG00000004406MSI29792.834ENSPNYG00000018393msi2a9492.834Pundamilia_nyererei
ENSBTAG00000004406MSI29794.881ENSPNAG00000000844msi2b9393.174Pygocentrus_nattereri
ENSBTAG00000004406MSI29794.805ENSPNAG00000014957msi2a9493.182Pygocentrus_nattereri
ENSBTAG00000004406MSI29799.640ENSRNOG00000025338Msi210099.640Rattus_norvegicus
ENSBTAG00000004406MSI258100.000ENSRROG00000034421-100100.000Rhinopithecus_roxellana
ENSBTAG00000004406MSI29999.554ENSSBOG00000026425MSI29699.167Saimiri_boliviensis_boliviensis
ENSBTAG00000004406MSI29792.901ENSSHAG00000008672MSI210092.901Sarcophilus_harrisii
ENSBTAG00000004406MSI29789.286ENSSFOG00015021687-9787.662Scleropages_formosus
ENSBTAG00000004406MSI29287.204ENSSFOG00015012168msi2b6887.204Scleropages_formosus
ENSBTAG00000004406MSI29494.348ENSSMAG00000018484msi2a9888.961Scophthalmus_maximus
ENSBTAG00000004406MSI29787.908ENSSDUG00000021968-9989.404Seriola_dumerili
ENSBTAG00000004406MSI29494.348ENSSDUG00000014507msi2a9888.961Seriola_dumerili
ENSBTAG00000004406MSI29494.348ENSSLDG00000017172msi2a9888.961Seriola_lalandi_dorsalis
ENSBTAG00000004406MSI25991.772ENSSPUG00000000913-9491.772Sphenodon_punctatus
ENSBTAG00000004406MSI29494.348ENSSPAG00000017793msi2a8993.015Stegastes_partitus
ENSBTAG00000004406MSI29799.674ENSSSCG00000038505MSI210094.444Sus_scrofa
ENSBTAG00000004406MSI27689.855ENSTGUG00000008452MSI210089.855Taeniopygia_guttata
ENSBTAG00000004406MSI29792.177ENSTRUG00000021248msi2a8892.177Takifugu_rubripes
ENSBTAG00000004406MSI27580.992ENSTBEG00000001241MSI27380.992Tupaia_belangeri
ENSBTAG00000004406MSI29790.336ENSTTRG00000002189MSI210090.336Tursiops_truncatus
ENSBTAG00000004406MSI210099.691ENSUAMG00000000700MSI210099.691Ursus_americanus
ENSBTAG00000004406MSI29792.086ENSUMAG00000000505MSI29599.590Ursus_maritimus
ENSBTAG00000004406MSI26384.615ENSVPAG00000006837-6284.615Vicugna_pacos
ENSBTAG00000004406MSI210098.339ENSVVUG00000011783MSI210098.339Vulpes_vulpes
ENSBTAG00000004406MSI29386.087ENSXCOG00000006113msi2a9872.861Xiphophorus_couchianus
ENSBTAG00000004406MSI29494.348ENSXMAG00000000608msi2a9788.435Xiphophorus_maculatus

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