EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000004492 (Gene tree)
Gene ID: -
Gene Symbol: SWT1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 39015 bases
Position: chr16:66173944-66212958
Accession: 35501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000053406	PIN_4	PF13638.6	3.1e-27	1	1
ENSBTAP00000005891	PIN_4	PF13638.6	1.3e-20	1	1
ENSBTAP00000071361	PIN_4	PF13638.6	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000066845	-	1542	-	ENSBTAP00000071361	446 (aa)	-	-
ENSBTAT00000005891	-	1476	-	ENSBTAP00000005891	491 (aa)	-	A6QQB4
ENSBTAT00000061295	-	1878	-	ENSBTAP00000053406	622 (aa)	-	F1MNS1

Gene Model

Click here to download ENSBTAG00000004492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000004492's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000004492	SWT1	100	75.000	ENSG00000116668	SWT1	100	56.604	Homo_sapiens
ENSBTAG00000004492	SWT1	100	78.795	ENSAMEG00000013585	SWT1	72	74.347	Ailuropoda_melanoleuca
ENSBTAG00000004492	SWT1	100	76.562	ENSANAG00000027068	SWT1	72	72.546	Aotus_nancymaae
ENSBTAG00000004492	SWT1	100	75.223	ENSCJAG00000005544	SWT1	71	72.274	Callithrix_jacchus
ENSBTAG00000004492	SWT1	100	76.682	ENSCAFG00000013543	SWT1	74	74.383	Canis_familiaris
ENSBTAG00000004492	SWT1	100	76.682	ENSCAFG00020015648	SWT1	70	77.722	Canis_lupus_dingo
ENSBTAG00000004492	SWT1	100	95.078	ENSCHIG00000023511	SWT1	100	94.919	Capra_hircus
ENSBTAG00000004492	SWT1	99	77.405	ENSTSYG00000010470	SWT1	72	73.926	Carlito_syrichta
ENSBTAG00000004492	SWT1	99	75.168	ENSCPOG00000014251	SWT1	76	74.478	Cavia_porcellus
ENSBTAG00000004492	SWT1	99	76.063	ENSCCAG00000033926	SWT1	72	72.546	Cebus_capucinus
ENSBTAG00000004492	SWT1	100	75.166	ENSCATG00000042210	SWT1	72	72.519	Cercocebus_atys
ENSBTAG00000004492	SWT1	99	73.778	ENSCLAG00000013959	SWT1	72	70.795	Chinchilla_lanigera
ENSBTAG00000004492	SWT1	100	75.166	ENSCSAG00000012895	SWT1	72	71.908	Chlorocebus_sabaeus
ENSBTAG00000004492	SWT1	51	61.321	ENSCPBG00000015691	SWT1	68	43.381	Chrysemys_picta_bellii
ENSBTAG00000004492	SWT1	100	75.893	ENSCANG00000032207	SWT1	72	72.546	Colobus_angolensis_palliatus
ENSBTAG00000004492	SWT1	99	69.731	ENSCGRG00001022955	Swt1	70	65.438	Cricetulus_griseus_chok1gshd
ENSBTAG00000004492	SWT1	99	69.731	ENSCGRG00000010224	Swt1	72	65.591	Cricetulus_griseus_crigri
ENSBTAG00000004492	SWT1	99	70.199	ENSDNOG00000005254	SWT1	79	68.293	Dasypus_novemcinctus
ENSBTAG00000004492	SWT1	99	69.726	ENSDORG00000010531	Swt1	70	69.726	Dipodomys_ordii
ENSBTAG00000004492	SWT1	100	79.018	ENSEASG00005005530	SWT1	81	75.920	Equus_asinus_asinus
ENSBTAG00000004492	SWT1	99	78.959	ENSECAG00000012085	SWT1	68	76.034	Equus_caballus
ENSBTAG00000004492	SWT1	96	66.667	ENSEEUG00000003664	SWT1	68	66.667	Erinaceus_europaeus
ENSBTAG00000004492	SWT1	99	77.629	ENSFCAG00000011286	SWT1	72	73.926	Felis_catus
ENSBTAG00000004492	SWT1	99	72.870	ENSFDAG00000007569	SWT1	72	70.308	Fukomys_damarensis
ENSBTAG00000004492	SWT1	94	40.093	ENSGAGG00000025050	SWT1	56	62.145	Gopherus_agassizii
ENSBTAG00000004492	SWT1	99	74.664	ENSHGLG00000006542	SWT1	71	74.277	Heterocephalus_glaber_female
ENSBTAG00000004492	SWT1	99	74.439	ENSHGLG00100014408	SWT1	72	70.769	Heterocephalus_glaber_male
ENSBTAG00000004492	SWT1	99	72.768	ENSSTOG00000010356	SWT1	72	69.372	Ictidomys_tridecemlineatus
ENSBTAG00000004492	SWT1	98	69.545	ENSJJAG00000015927	Swt1	71	64.873	Jaculus_jaculus
ENSBTAG00000004492	SWT1	67	48.276	ENSLACG00000009194	SWT1	62	48.276	Latimeria_chalumnae
ENSBTAG00000004492	SWT1	58	43.014	ENSLOCG00000001749	swt1	55	46.823	Lepisosteus_oculatus
ENSBTAG00000004492	SWT1	53	85.928	ENSLAFG00000004346	-	57	85.928	Loxodonta_africana
ENSBTAG00000004492	SWT1	100	75.166	ENSMFAG00000031793	SWT1	72	72.214	Macaca_fascicularis
ENSBTAG00000004492	SWT1	100	70.370	ENSMMUG00000013882	SWT1	72	68.929	Macaca_mulatta
ENSBTAG00000004492	SWT1	100	75.166	ENSMNEG00000035502	SWT1	76	72.214	Macaca_nemestrina
ENSBTAG00000004492	SWT1	100	75.893	ENSMLEG00000038692	SWT1	72	72.853	Mandrillus_leucophaeus
ENSBTAG00000004492	SWT1	51	53.776	ENSMGAG00000000973	SWT1	56	53.776	Meleagris_gallopavo
ENSBTAG00000004492	SWT1	99	68.834	ENSMAUG00000007996	Swt1	74	64.670	Mesocricetus_auratus
ENSBTAG00000004492	SWT1	99	78.747	ENSMICG00000014975	SWT1	72	75.153	Microcebus_murinus
ENSBTAG00000004492	SWT1	99	69.058	ENSMOCG00000009776	Swt1	70	65.794	Microtus_ochrogaster
ENSBTAG00000004492	SWT1	99	54.684	ENSMODG00000007472	SWT1	72	52.844	Monodelphis_domestica
ENSBTAG00000004492	SWT1	99	64.126	MGP_CAROLIEiJ_G0014692	Swt1	71	85.311	Mus_caroli
ENSBTAG00000004492	SWT1	99	62.697	ENSMUSG00000052748	Swt1	71	83.051	Mus_musculus
ENSBTAG00000004492	SWT1	99	65.471	MGP_PahariEiJ_G0027928	Swt1	71	87.006	Mus_pahari
ENSBTAG00000004492	SWT1	99	63.596	MGP_SPRETEiJ_G0015499	Swt1	71	85.311	Mus_spretus
ENSBTAG00000004492	SWT1	100	77.629	ENSMPUG00000011913	SWT1	72	74.154	Mustela_putorius_furo
ENSBTAG00000004492	SWT1	100	74.554	ENSMLUG00000001142	SWT1	68	71.835	Myotis_lucifugus
ENSBTAG00000004492	SWT1	99	70.179	ENSNGAG00000021080	Swt1	70	66.513	Nannospalax_galili
ENSBTAG00000004492	SWT1	100	74.554	ENSNLEG00000018031	SWT1	72	72.086	Nomascus_leucogenys
ENSBTAG00000004492	SWT1	96	41.431	ENSMEUG00000000236	-	66	42.263	Notamacropus_eugenii
ENSBTAG00000004492	SWT1	78	93.548	ENSOPRG00000000692	SWT1	59	57.485	Ochotona_princeps
ENSBTAG00000004492	SWT1	52	39.877	ENSONIG00000009994	swt1	58	39.877	Oreochromis_niloticus
ENSBTAG00000004492	SWT1	88	49.749	ENSOANG00000001013	-	67	51.397	Ornithorhynchus_anatinus
ENSBTAG00000004492	SWT1	100	64.430	ENSOCUG00000004901	SWT1	71	64.000	Oryctolagus_cuniculus
ENSBTAG00000004492	SWT1	99	76.298	ENSOGAG00000016195	SWT1	72	72.377	Otolemur_garnettii
ENSBTAG00000004492	SWT1	100	94.183	ENSOARG00000004156	SWT1	70	88.752	Ovis_aries
ENSBTAG00000004492	SWT1	100	74.554	ENSPPAG00000021400	SWT1	72	71.933	Pan_paniscus
ENSBTAG00000004492	SWT1	100	77.951	ENSPPRG00000023754	SWT1	72	74.387	Panthera_pardus
ENSBTAG00000004492	SWT1	100	77.951	ENSPTIG00000021889	SWT1	72	74.387	Panthera_tigris_altaica
ENSBTAG00000004492	SWT1	100	74.777	ENSPTRG00000001777	SWT1	72	72.086	Pan_troglodytes
ENSBTAG00000004492	SWT1	100	74.723	ENSPANG00000005099	SWT1	72	72.061	Papio_anubis
ENSBTAG00000004492	SWT1	97	42.698	ENSPSIG00000008961	SWT1	68	42.698	Pelodiscus_sinensis
ENSBTAG00000004492	SWT1	59	37.701	ENSPMGG00000000152	-	53	37.701	Periophthalmus_magnuspinnatus
ENSBTAG00000004492	SWT1	99	68.161	ENSPEMG00000008208	Swt1	70	64.977	Peromyscus_maniculatus_bairdii
ENSBTAG00000004492	SWT1	99	56.672	ENSPCIG00000002443	SWT1	79	56.627	Phascolarctos_cinereus
ENSBTAG00000004492	SWT1	100	73.884	ENSPPYG00000000415	SWT1	72	71.538	Pongo_abelii
ENSBTAG00000004492	SWT1	99	68.161	ENSPCAG00000008337	SWT1	72	66.052	Procavia_capensis
ENSBTAG00000004492	SWT1	77	81.443	ENSPCOG00000018195	-	55	81.443	Propithecus_coquereli
ENSBTAG00000004492	SWT1	74	74.026	ENSPVAG00000005968	SWT1	52	74.310	Pteropus_vampyrus
ENSBTAG00000004492	SWT1	99	64.811	ENSRNOG00000032258	Swt1	68	65.047	Rattus_norvegicus
ENSBTAG00000004492	SWT1	99	76.018	ENSRBIG00000040630	SWT1	71	73.450	Rhinopithecus_bieti
ENSBTAG00000004492	SWT1	99	76.286	ENSRROG00000028596	SWT1	98	74.359	Rhinopithecus_roxellana
ENSBTAG00000004492	SWT1	99	77.405	ENSSBOG00000028825	SWT1	72	72.936	Saimiri_boliviensis_boliviensis
ENSBTAG00000004492	SWT1	99	54.148	ENSSHAG00000009241	SWT1	80	52.545	Sarcophilus_harrisii
ENSBTAG00000004492	SWT1	50	65.064	ENSSARG00000011524	-	60	65.064	Sorex_araneus
ENSBTAG00000004492	SWT1	71	46.320	ENSSPUG00000003899	SWT1	50	46.154	Sphenodon_punctatus
ENSBTAG00000004492	SWT1	99	82.287	ENSSSCG00000015569	SWT1	79	77.812	Sus_scrofa
ENSBTAG00000004492	SWT1	98	85.160	ENSTTRG00000005914	SWT1	70	78.898	Tursiops_truncatus
ENSBTAG00000004492	SWT1	99	78.959	ENSUAMG00000020937	SWT1	68	79.268	Ursus_americanus
ENSBTAG00000004492	SWT1	100	79.018	ENSUMAG00000021918	SWT1	75	74.962	Ursus_maritimus
ENSBTAG00000004492	SWT1	84	100.000	ENSVPAG00000011855	SWT1	64	85.030	Vicugna_pacos
ENSBTAG00000004492	SWT1	99	78.296	ENSVVUG00000009182	SWT1	71	78.296	Vulpes_vulpes