EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000004993 (Gene tree)
Gene ID: 520351
Gene Symbol: NXT1
Alias: -
Full Name: Bos taurus nuclear transport factor 2 like export factor 1 (NXT1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 2878 bases
Position: chr13:42019553-42022430
Accession: NM_001075805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000006568	NTF2	PF02136.20	5.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSBTAG00000004993's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG
bta03013	RNA transport	KEGG
bta03015	mRNA surveillance pathway	KEGG
bta05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000004993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000004993	NXT1	98	75.912	ENSBTAG00000020739	NXT2	96	75.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000004993	NXT1	99	97.842	ENSG00000132661	NXT1	99	97.842	Homo_sapiens
ENSBTAG00000004993	NXT1	99	100.000	ENSAMEG00000018729	NXT1	99	100.000	Ailuropoda_melanoleuca
ENSBTAG00000004993	NXT1	99	98.561	ENSANAG00000010003	NXT1	99	98.561	Aotus_nancymaae
ENSBTAG00000004993	NXT1	99	98.561	ENSCJAG00000044836	NXT1	99	98.561	Callithrix_jacchus
ENSBTAG00000004993	NXT1	99	97.826	ENSTSYG00000007592	NXT1	99	97.826	Carlito_syrichta
ENSBTAG00000004993	NXT1	99	97.122	ENSCAPG00000012780	NXT1	99	97.122	Cavia_aperea
ENSBTAG00000004993	NXT1	99	97.122	ENSCPOG00000008817	NXT1	99	97.122	Cavia_porcellus
ENSBTAG00000004993	NXT1	99	98.561	ENSCCAG00000015478	NXT1	99	98.561	Cebus_capucinus
ENSBTAG00000004993	NXT1	99	97.842	ENSCATG00000019026	NXT1	99	97.842	Cercocebus_atys
ENSBTAG00000004993	NXT1	99	97.122	ENSCLAG00000012493	NXT1	99	97.122	Chinchilla_lanigera
ENSBTAG00000004993	NXT1	99	97.842	ENSCSAG00000018678	NXT1	99	97.842	Chlorocebus_sabaeus
ENSBTAG00000004993	NXT1	99	92.806	ENSCHOG00000007142	NXT1	99	92.806	Choloepus_hoffmanni
ENSBTAG00000004993	NXT1	99	97.842	ENSCANG00000001309	NXT1	99	97.842	Colobus_angolensis_palliatus
ENSBTAG00000004993	NXT1	99	78.014	ENSCGRG00001014411	-	98	78.014	Cricetulus_griseus_chok1gshd
ENSBTAG00000004993	NXT1	99	97.122	ENSCGRG00001007062	-	99	97.122	Cricetulus_griseus_chok1gshd
ENSBTAG00000004993	NXT1	99	78.014	ENSCGRG00000005554	-	98	78.014	Cricetulus_griseus_crigri
ENSBTAG00000004993	NXT1	99	97.122	ENSCGRG00000012771	-	99	97.122	Cricetulus_griseus_crigri
ENSBTAG00000004993	NXT1	99	57.857	ENSDNOG00000040022	-	98	57.857	Dasypus_novemcinctus
ENSBTAG00000004993	NXT1	99	93.525	ENSDNOG00000015112	-	99	93.525	Dasypus_novemcinctus
ENSBTAG00000004993	NXT1	99	99.281	ENSDORG00000024690	Nxt1	99	99.281	Dipodomys_ordii
ENSBTAG00000004993	NXT1	99	97.122	ENSEASG00005002553	NXT1	99	97.122	Equus_asinus_asinus
ENSBTAG00000004993	NXT1	99	97.122	ENSECAG00000035032	NXT1	99	97.122	Equus_caballus
ENSBTAG00000004993	NXT1	99	95.652	ENSEEUG00000013818	NXT1	99	95.652	Erinaceus_europaeus
ENSBTAG00000004993	NXT1	99	99.281	ENSFCAG00000006482	NXT1	99	99.281	Felis_catus
ENSBTAG00000004993	NXT1	95	81.203	ENSFDAG00000006553	-	95	81.203	Fukomys_damarensis
ENSBTAG00000004993	NXT1	99	97.842	ENSFDAG00000012027	-	99	97.842	Fukomys_damarensis
ENSBTAG00000004993	NXT1	99	97.842	ENSGGOG00000012539	-	99	97.842	Gorilla_gorilla
ENSBTAG00000004993	NXT1	75	82.857	ENSGGOG00000022722	-	79	82.857	Gorilla_gorilla
ENSBTAG00000004993	NXT1	99	97.842	ENSHGLG00000007882	NXT1	99	97.842	Heterocephalus_glaber_female
ENSBTAG00000004993	NXT1	99	97.842	ENSHGLG00100015157	NXT1	99	97.842	Heterocephalus_glaber_male
ENSBTAG00000004993	NXT1	99	97.122	ENSSTOG00000026331	NXT1	99	97.122	Ictidomys_tridecemlineatus
ENSBTAG00000004993	NXT1	99	99.281	ENSJJAG00000012022	-	99	99.281	Jaculus_jaculus
ENSBTAG00000004993	NXT1	99	80.576	ENSJJAG00000013926	-	99	80.576	Jaculus_jaculus
ENSBTAG00000004993	NXT1	99	97.122	ENSLAFG00000029098	NXT1	99	97.122	Loxodonta_africana
ENSBTAG00000004993	NXT1	99	97.842	ENSMFAG00000019296	NXT1	99	97.842	Macaca_fascicularis
ENSBTAG00000004993	NXT1	99	97.842	ENSMMUG00000022386	NXT1	99	97.842	Macaca_mulatta
ENSBTAG00000004993	NXT1	99	97.842	ENSMNEG00000027745	NXT1	99	97.842	Macaca_nemestrina
ENSBTAG00000004993	NXT1	99	97.842	ENSMLEG00000027268	NXT1	99	97.842	Mandrillus_leucophaeus
ENSBTAG00000004993	NXT1	99	97.122	ENSMAUG00000004141	Nxt1	99	97.122	Mesocricetus_auratus
ENSBTAG00000004993	NXT1	99	97.122	ENSMICG00000044853	NXT1	99	97.122	Microcebus_murinus
ENSBTAG00000004993	NXT1	99	94.964	ENSMOCG00000018712	Nxt1	99	94.964	Microtus_ochrogaster
ENSBTAG00000004993	NXT1	99	97.842	MGP_CAROLIEiJ_G0024408	Nxt1	99	97.842	Mus_caroli
ENSBTAG00000004993	NXT1	99	97.842	ENSMUSG00000036992	Nxt1	99	97.842	Mus_musculus
ENSBTAG00000004993	NXT1	99	96.403	MGP_PahariEiJ_G0025851	Nxt1	99	96.403	Mus_pahari
ENSBTAG00000004993	NXT1	99	97.842	MGP_SPRETEiJ_G0025326	Nxt1	99	97.842	Mus_spretus
ENSBTAG00000004993	NXT1	99	99.281	ENSMPUG00000019260	NXT1	99	99.281	Mustela_putorius_furo
ENSBTAG00000004993	NXT1	99	98.561	ENSMLUG00000006881	NXT1	99	98.561	Myotis_lucifugus
ENSBTAG00000004993	NXT1	99	99.281	ENSNGAG00000000803	Nxt1	99	99.281	Nannospalax_galili
ENSBTAG00000004993	NXT1	99	97.842	ENSOPRG00000006167	NXT1	99	97.842	Ochotona_princeps
ENSBTAG00000004993	NXT1	99	96.403	ENSODEG00000019900	NXT1	99	96.403	Octodon_degus
ENSBTAG00000004993	NXT1	99	97.842	ENSOCUG00000025924	NXT1	99	97.842	Oryctolagus_cuniculus
ENSBTAG00000004993	NXT1	99	98.561	ENSOGAG00000000717	NXT1	99	98.561	Otolemur_garnettii
ENSBTAG00000004993	NXT1	99	97.842	ENSPPAG00000020479	NXT1	99	97.842	Pan_paniscus
ENSBTAG00000004993	NXT1	99	99.281	ENSPPRG00000021392	NXT1	99	99.281	Panthera_pardus
ENSBTAG00000004993	NXT1	99	99.281	ENSPTIG00000003788	NXT1	99	99.281	Panthera_tigris_altaica
ENSBTAG00000004993	NXT1	99	97.842	ENSPTRG00000013319	NXT1	99	97.842	Pan_troglodytes
ENSBTAG00000004993	NXT1	99	97.842	ENSPANG00000023254	NXT1	99	97.842	Papio_anubis
ENSBTAG00000004993	NXT1	99	95.683	ENSPEMG00000010397	Nxt1	99	95.683	Peromyscus_maniculatus_bairdii
ENSBTAG00000004993	NXT1	99	97.842	ENSPPYG00000010765	NXT1	99	97.842	Pongo_abelii
ENSBTAG00000004993	NXT1	99	96.403	ENSPCAG00000009373	-	99	96.403	Procavia_capensis
ENSBTAG00000004993	NXT1	99	99.281	ENSPCOG00000025624	NXT1	99	99.281	Propithecus_coquereli
ENSBTAG00000004993	NXT1	99	98.561	ENSPVAG00000014055	NXT1	99	98.561	Pteropus_vampyrus
ENSBTAG00000004993	NXT1	99	98.561	ENSRNOG00000004700	Nxt1	99	98.561	Rattus_norvegicus
ENSBTAG00000004993	NXT1	99	97.842	ENSRBIG00000021433	NXT1	99	97.842	Rhinopithecus_bieti
ENSBTAG00000004993	NXT1	99	97.842	ENSRROG00000026657	NXT1	99	97.842	Rhinopithecus_roxellana
ENSBTAG00000004993	NXT1	99	98.561	ENSSBOG00000036378	NXT1	99	98.561	Saimiri_boliviensis_boliviensis
ENSBTAG00000004993	NXT1	99	97.122	ENSSARG00000007842	NXT1	99	97.122	Sorex_araneus
ENSBTAG00000004993	NXT1	100	97.857	ENSSSCG00000007119	NXT1	100	97.857	Sus_scrofa
ENSBTAG00000004993	NXT1	99	98.561	ENSTBEG00000012251	NXT1	99	98.561	Tupaia_belangeri
ENSBTAG00000004993	NXT1	100	99.286	ENSTTRG00000011348	NXT1	100	99.286	Tursiops_truncatus
ENSBTAG00000004993	NXT1	99	100.000	ENSUAMG00000021860	NXT1	99	100.000	Ursus_americanus
ENSBTAG00000004993	NXT1	99	100.000	ENSUMAG00000004062	NXT1	99	100.000	Ursus_maritimus
ENSBTAG00000004993	NXT1	99	99.281	ENSVVUG00000012091	NXT1	99	99.281	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	-	IEA	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0051028	mRNA transport	-	IEA	Process