EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000005289 (Gene tree)
Gene ID: 525110
Gene Symbol: CHERP
Alias: -
Full Name: Bos taurus calcium homeostasis endoplasmic reticulum protein (CHERP)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 19276 bases
Position: chr7:6479012-6498287
Accession: NM_001109798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000058562	Surp	PF01805.20	6e-16	1	1
ENSBTAP00000006959	Surp	PF01805.20	6.2e-16	1	1
ENSBTAP00000058562	G-patch	PF01585.23	1.5e-11	1	1
ENSBTAP00000006959	G-patch	PF01585.23	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000006959	-	3982	-	ENSBTAP00000006959	916 (aa)	-	A8E648
ENSBTAT00000076341	-	2694	-	ENSBTAP00000058562	897 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000005289's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005289	CHERP	100	97.162	ENSG00000085872	CHERP	100	97.162	Homo_sapiens
ENSBTAG00000005289	CHERP	60	61.837	ENSAPOG00000009646	cherp	96	62.903	Acanthochromis_polyacanthus
ENSBTAG00000005289	CHERP	99	88.719	ENSAMEG00000010048	CHERP	100	90.361	Ailuropoda_melanoleuca
ENSBTAG00000005289	CHERP	99	65.222	ENSACIG00000019242	cherp	99	66.955	Amphilophus_citrinellus
ENSBTAG00000005289	CHERP	99	66.132	ENSAOCG00000017846	cherp	99	67.914	Amphiprion_ocellaris
ENSBTAG00000005289	CHERP	99	65.134	ENSAPEG00000021128	cherp	99	66.381	Amphiprion_percula
ENSBTAG00000005289	CHERP	99	65.343	ENSATEG00000006341	cherp	98	66.488	Anabas_testudineus
ENSBTAG00000005289	CHERP	79	84.203	ENSAPLG00000010773	CHERP	99	84.228	Anas_platyrhynchos
ENSBTAG00000005289	CHERP	50	81.971	ENSACAG00000011583	CHERP	100	82.809	Anolis_carolinensis
ENSBTAG00000005289	CHERP	100	96.009	ENSANAG00000024284	CHERP	100	96.009	Aotus_nancymaae
ENSBTAG00000005289	CHERP	99	65.455	ENSACLG00000020053	cherp	99	66.345	Astatotilapia_calliptera
ENSBTAG00000005289	CHERP	99	68.288	ENSAMXG00000021637	cherp	93	68.349	Astyanax_mexicanus
ENSBTAG00000005289	CHERP	100	95.901	ENSCJAG00000040462	CHERP	100	95.901	Callithrix_jacchus
ENSBTAG00000005289	CHERP	100	98.253	ENSCAFG00000015671	CHERP	100	98.253	Canis_familiaris
ENSBTAG00000005289	CHERP	100	97.087	ENSCAFG00020009941	CHERP	100	97.087	Canis_lupus_dingo
ENSBTAG00000005289	CHERP	100	91.531	ENSCHIG00000013765	CHERP	100	89.198	Capra_hircus
ENSBTAG00000005289	CHERP	93	89.260	ENSCAPG00000000910	CHERP	90	92.959	Cavia_aperea
ENSBTAG00000005289	CHERP	99	95.548	ENSCPOG00000019949	CHERP	99	95.548	Cavia_porcellus
ENSBTAG00000005289	CHERP	100	96.117	ENSCCAG00000031534	CHERP	100	96.117	Cebus_capucinus
ENSBTAG00000005289	CHERP	100	95.797	ENSCATG00000031409	CHERP	100	95.797	Cercocebus_atys
ENSBTAG00000005289	CHERP	93	93.830	ENSCLAG00000005484	CHERP	98	93.830	Chinchilla_lanigera
ENSBTAG00000005289	CHERP	100	97.162	ENSCSAG00000005740	CHERP	100	97.162	Chlorocebus_sabaeus
ENSBTAG00000005289	CHERP	100	85.201	ENSCPBG00000014970	CHERP	100	85.294	Chrysemys_picta_bellii
ENSBTAG00000005289	CHERP	68	56.655	ENSCING00000004814	-	53	71.277	Ciona_intestinalis
ENSBTAG00000005289	CHERP	100	97.052	ENSCANG00000032053	CHERP	100	97.052	Colobus_angolensis_palliatus
ENSBTAG00000005289	CHERP	99	93.649	ENSCGRG00001023316	Cherp	99	94.080	Cricetulus_griseus_chok1gshd
ENSBTAG00000005289	CHERP	99	94.639	ENSCGRG00000015901	Cherp	99	94.967	Cricetulus_griseus_crigri
ENSBTAG00000005289	CHERP	82	67.148	ENSCSEG00000019700	cherp	99	64.346	Cynoglossus_semilaevis
ENSBTAG00000005289	CHERP	78	66.852	ENSCVAG00000003622	cherp	97	63.411	Cyprinodon_variegatus
ENSBTAG00000005289	CHERP	99	67.822	ENSDARG00000021812	cherp	100	75.954	Danio_rerio
ENSBTAG00000005289	CHERP	99	91.266	ENSDORG00000027623	Cherp	100	91.157	Dipodomys_ordii
ENSBTAG00000005289	CHERP	66	59.000	FBgn0261872	scaf6	55	63.235	Drosophila_melanogaster
ENSBTAG00000005289	CHERP	83	95.089	ENSETEG00000019543	CHERP	83	95.089	Echinops_telfairi
ENSBTAG00000005289	CHERP	68	70.833	ENSEBUG00000009109	cherp	55	70.833	Eptatretus_burgeri
ENSBTAG00000005289	CHERP	100	98.035	ENSEASG00005000428	CHERP	92	98.035	Equus_asinus_asinus
ENSBTAG00000005289	CHERP	100	97.926	ENSECAG00000012713	CHERP	100	97.926	Equus_caballus
ENSBTAG00000005289	CHERP	99	68.438	ENSELUG00000023026	cherp	98	65.581	Esox_lucius
ENSBTAG00000005289	CHERP	100	96.878	ENSFCAG00000013172	CHERP	100	96.878	Felis_catus
ENSBTAG00000005289	CHERP	82	86.024	ENSFALG00000013410	CHERP	86	85.387	Ficedula_albicollis
ENSBTAG00000005289	CHERP	81	83.875	ENSFDAG00000015981	CHERP	100	82.170	Fukomys_damarensis
ENSBTAG00000005289	CHERP	99	59.603	ENSFHEG00000009720	cherp	97	59.868	Fundulus_heteroclitus
ENSBTAG00000005289	CHERP	81	65.818	ENSGMOG00000008654	cherp	99	64.856	Gadus_morhua
ENSBTAG00000005289	CHERP	82	85.695	ENSGALG00000003824	CHERP	88	85.185	Gallus_gallus
ENSBTAG00000005289	CHERP	99	62.806	ENSGACG00000002053	cherp	98	62.896	Gasterosteus_aculeatus
ENSBTAG00000005289	CHERP	100	84.766	ENSGAGG00000014208	CHERP	100	85.076	Gopherus_agassizii
ENSBTAG00000005289	CHERP	93	80.023	ENSGGOG00000016348	CHERP	100	84.651	Gorilla_gorilla
ENSBTAG00000005289	CHERP	99	65.273	ENSHBUG00000007405	cherp	99	65.356	Haplochromis_burtoni
ENSBTAG00000005289	CHERP	99	95.961	ENSHGLG00000002993	CHERP	99	95.961	Heterocephalus_glaber_female
ENSBTAG00000005289	CHERP	61	82.831	ENSHGLG00100010390	CHERP	69	82.599	Heterocephalus_glaber_male
ENSBTAG00000005289	CHERP	99	56.540	ENSHCOG00000007691	cherp	99	62.959	Hippocampus_comes
ENSBTAG00000005289	CHERP	99	68.851	ENSIPUG00000025008	cherp	99	69.107	Ictalurus_punctatus
ENSBTAG00000005289	CHERP	99	97.348	ENSSTOG00000012089	CHERP	99	97.348	Ictidomys_tridecemlineatus
ENSBTAG00000005289	CHERP	99	90.950	ENSJJAG00000017982	Cherp	99	88.939	Jaculus_jaculus
ENSBTAG00000005289	CHERP	82	66.268	ENSKMAG00000009101	cherp	99	63.180	Kryptolebias_marmoratus
ENSBTAG00000005289	CHERP	81	65.768	ENSLBEG00000007586	cherp	91	66.937	Labrus_bergylta
ENSBTAG00000005289	CHERP	99	79.979	ENSLACG00000018221	CHERP	99	79.979	Latimeria_chalumnae
ENSBTAG00000005289	CHERP	99	75.777	ENSLOCG00000003654	cherp	99	74.231	Lepisosteus_oculatus
ENSBTAG00000005289	CHERP	99	94.645	ENSLAFG00000009096	CHERP	100	94.536	Loxodonta_africana
ENSBTAG00000005289	CHERP	100	95.901	ENSMFAG00000033267	CHERP	100	95.901	Macaca_fascicularis
ENSBTAG00000005289	CHERP	100	94.286	ENSMMUG00000012958	CHERP	100	94.286	Macaca_mulatta
ENSBTAG00000005289	CHERP	100	95.901	ENSMNEG00000004125	CHERP	100	95.901	Macaca_nemestrina
ENSBTAG00000005289	CHERP	94	97.929	ENSMLEG00000044337	CHERP	99	97.929	Mandrillus_leucophaeus
ENSBTAG00000005289	CHERP	82	66.979	ENSMAMG00000022269	cherp	99	65.315	Mastacembelus_armatus
ENSBTAG00000005289	CHERP	99	65.348	ENSMZEG00005018014	cherp	99	66.238	Maylandia_zebra
ENSBTAG00000005289	CHERP	71	85.984	ENSMGAG00000005571	CHERP	93	85.697	Meleagris_gallopavo
ENSBTAG00000005289	CHERP	99	93.959	ENSMAUG00000015856	Cherp	99	94.283	Mesocricetus_auratus
ENSBTAG00000005289	CHERP	100	95.861	ENSMICG00000004577	CHERP	100	95.861	Microcebus_murinus
ENSBTAG00000005289	CHERP	99	94.863	ENSMOCG00000014697	Cherp	99	95.410	Microtus_ochrogaster
ENSBTAG00000005289	CHERP	99	66.488	ENSMMOG00000008525	cherp	96	65.584	Mola_mola
ENSBTAG00000005289	CHERP	99	90.919	ENSMODG00000014938	CHERP	100	91.026	Monodelphis_domestica
ENSBTAG00000005289	CHERP	82	67.156	ENSMALG00000020688	cherp	99	63.836	Monopterus_albus
ENSBTAG00000005289	CHERP	99	94.035	MGP_CAROLIEiJ_G0031220	Cherp	99	94.360	Mus_caroli
ENSBTAG00000005289	CHERP	99	92.108	ENSMUSG00000052488	Cherp	99	92.216	Mus_musculus
ENSBTAG00000005289	CHERP	99	94.098	MGP_PahariEiJ_G0021685	Cherp	99	94.645	Mus_pahari
ENSBTAG00000005289	CHERP	99	94.022	MGP_SPRETEiJ_G0032341	Cherp	99	94.348	Mus_spretus
ENSBTAG00000005289	CHERP	100	96.980	ENSMPUG00000016023	CHERP	98	96.980	Mustela_putorius_furo
ENSBTAG00000005289	CHERP	100	92.725	ENSMLUG00000013881	CHERP	100	92.725	Myotis_lucifugus
ENSBTAG00000005289	CHERP	100	92.489	ENSNGAG00000023323	Cherp	100	92.060	Nannospalax_galili
ENSBTAG00000005289	CHERP	99	65.033	ENSNBRG00000001914	cherp	99	65.655	Neolamprologus_brichardi
ENSBTAG00000005289	CHERP	100	97.162	ENSNLEG00000005536	CHERP	100	97.162	Nomascus_leucogenys
ENSBTAG00000005289	CHERP	91	93.715	ENSMEUG00000010840	CHERP	91	95.009	Notamacropus_eugenii
ENSBTAG00000005289	CHERP	99	88.514	ENSODEG00000001528	CHERP	99	93.131	Octodon_degus
ENSBTAG00000005289	CHERP	99	64.756	ENSONIG00000007686	cherp	99	65.462	Oreochromis_niloticus
ENSBTAG00000005289	CHERP	82	66.229	ENSORLG00000000138	cherp	99	65.558	Oryzias_latipes
ENSBTAG00000005289	CHERP	82	66.097	ENSORLG00020013142	cherp	99	65.343	Oryzias_latipes_hni
ENSBTAG00000005289	CHERP	82	65.707	ENSORLG00015008911	cherp	99	65.451	Oryzias_latipes_hsok
ENSBTAG00000005289	CHERP	99	63.868	ENSOMEG00000016947	cherp	99	65.773	Oryzias_melastigma
ENSBTAG00000005289	CHERP	99	95.524	ENSOGAG00000005834	CHERP	99	95.420	Otolemur_garnettii
ENSBTAG00000005289	CHERP	100	90.000	ENSOARG00000018876	CHERP	97	90.000	Ovis_aries
ENSBTAG00000005289	CHERP	100	95.797	ENSPPAG00000029195	CHERP	100	95.797	Pan_paniscus
ENSBTAG00000005289	CHERP	100	96.878	ENSPPRG00000003275	CHERP	100	96.878	Panthera_pardus
ENSBTAG00000005289	CHERP	99	70.143	ENSPTIG00000019778	CHERP	100	71.525	Panthera_tigris_altaica
ENSBTAG00000005289	CHERP	100	97.056	ENSPTRG00000010647	CHERP	100	97.056	Pan_troglodytes
ENSBTAG00000005289	CHERP	100	95.901	ENSPANG00000011698	CHERP	100	95.901	Papio_anubis
ENSBTAG00000005289	CHERP	80	66.988	ENSPKIG00000000423	cherp	99	67.273	Paramormyrops_kingsleyae
ENSBTAG00000005289	CHERP	99	85.076	ENSPSIG00000011974	CHERP	100	85.993	Pelodiscus_sinensis
ENSBTAG00000005289	CHERP	99	63.859	ENSPMGG00000023606	cherp	88	92.405	Periophthalmus_magnuspinnatus
ENSBTAG00000005289	CHERP	99	92.926	ENSPEMG00000011238	Cherp	99	93.248	Peromyscus_maniculatus_bairdii
ENSBTAG00000005289	CHERP	100	91.202	ENSPCIG00000019615	CHERP	95	91.202	Phascolarctos_cinereus
ENSBTAG00000005289	CHERP	99	65.892	ENSPFOG00000016899	cherp	99	65.795	Poecilia_formosa
ENSBTAG00000005289	CHERP	86	64.330	ENSPMEG00000002214	cherp	99	66.071	Poecilia_mexicana
ENSBTAG00000005289	CHERP	99	65.096	ENSPREG00000020774	cherp	99	64.056	Poecilia_reticulata
ENSBTAG00000005289	CHERP	100	91.703	ENSPPYG00000009691	CHERP	100	91.485	Pongo_abelii
ENSBTAG00000005289	CHERP	92	96.842	ENSPCAG00000001337	CHERP	90	96.842	Procavia_capensis
ENSBTAG00000005289	CHERP	66	97.032	ENSPCOG00000022788	CHERP	99	100.000	Propithecus_coquereli
ENSBTAG00000005289	CHERP	92	98.947	ENSPVAG00000004320	CHERP	90	98.947	Pteropus_vampyrus
ENSBTAG00000005289	CHERP	99	64.920	ENSPNYG00000003942	cherp	99	65.250	Pundamilia_nyererei
ENSBTAG00000005289	CHERP	99	67.400	ENSPNAG00000017179	cherp	99	67.400	Pygocentrus_nattereri
ENSBTAG00000005289	CHERP	99	94.035	ENSRNOG00000012323	Cherp	99	94.252	Rattus_norvegicus
ENSBTAG00000005289	CHERP	99	97.155	ENSRBIG00000038621	CHERP	99	97.155	Rhinopithecus_bieti
ENSBTAG00000005289	CHERP	100	95.901	ENSRROG00000040770	CHERP	100	95.901	Rhinopithecus_roxellana
ENSBTAG00000005289	CHERP	100	95.905	ENSSBOG00000014492	CHERP	100	95.905	Saimiri_boliviensis_boliviensis
ENSBTAG00000005289	CHERP	99	91.164	ENSSHAG00000010752	CHERP	99	90.909	Sarcophilus_harrisii
ENSBTAG00000005289	CHERP	81	60.594	ENSSFOG00015008022	cherp	84	76.558	Scleropages_formosus
ENSBTAG00000005289	CHERP	99	65.048	ENSSMAG00000005362	cherp	99	65.084	Scophthalmus_maximus
ENSBTAG00000005289	CHERP	99	66.997	ENSSDUG00000019712	cherp	98	68.022	Seriola_dumerili
ENSBTAG00000005289	CHERP	82	69.559	ENSSLDG00000012659	cherp	99	66.702	Seriola_lalandi_dorsalis
ENSBTAG00000005289	CHERP	100	84.348	ENSSPUG00000008901	CHERP	100	84.457	Sphenodon_punctatus
ENSBTAG00000005289	CHERP	99	67.380	ENSSPAG00000010681	cherp	99	66.314	Stegastes_partitus
ENSBTAG00000005289	CHERP	100	97.926	ENSSSCG00000013860	CHERP	100	97.926	Sus_scrofa
ENSBTAG00000005289	CHERP	100	87.241	ENSTGUG00000000680	CHERP	100	87.241	Taeniopygia_guttata
ENSBTAG00000005289	CHERP	82	64.529	ENSTRUG00000007429	cherp	99	60.124	Takifugu_rubripes
ENSBTAG00000005289	CHERP	100	64.141	ENSTNIG00000003363	cherp	99	61.229	Tetraodon_nigroviridis
ENSBTAG00000005289	CHERP	89	97.685	ENSTTRG00000015006	CHERP	89	97.685	Tursiops_truncatus
ENSBTAG00000005289	CHERP	100	90.011	ENSUAMG00000017295	CHERP	80	96.774	Ursus_americanus
ENSBTAG00000005289	CHERP	69	88.119	ENSUMAG00000000965	CHERP	70	84.591	Ursus_maritimus
ENSBTAG00000005289	CHERP	100	96.563	ENSVVUG00000016546	CHERP	100	96.563	Vulpes_vulpes
ENSBTAG00000005289	CHERP	56	82.651	ENSXETG00000002072	cherp	97	78.890	Xenopus_tropicalis