EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000005385 (Gene tree)
Gene ID: 507410
Gene Symbol: POP5
Alias: -
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 2865 bases
Position: chr17:62851819-62854683
Accession: 33165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000007083	RNase_P_Rpp14	PF01900.19	2.4e-26	1	1
ENSBTAP00000068266	RNase_P_Rpp14	PF01900.19	2.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000086612	-	1502	-	ENSBTAP00000068266	174 (aa)	-	-
ENSBTAT00000007083	-	1418	-	ENSBTAP00000007083	170 (aa)	-	G1K1B6

Gene Model

Click here to download ENSBTAG00000005385's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005385	POP5	87	93.243	ENSG00000167272	POP5	100	87.059	Homo_sapiens
ENSBTAG00000005385	POP5	88	56.376	ENSAPOG00000023686	POP5	100	53.571	Acanthochromis_polyacanthus
ENSBTAG00000005385	POP5	100	87.791	ENSAMEG00000008503	POP5	100	87.791	Ailuropoda_melanoleuca
ENSBTAG00000005385	POP5	84	56.338	ENSACIG00000018362	pop5	98	54.878	Amphilophus_citrinellus
ENSBTAG00000005385	POP5	88	54.667	ENSAOCG00000001930	pop5	99	53.012	Amphiprion_ocellaris
ENSBTAG00000005385	POP5	88	55.333	ENSAPEG00000006795	pop5	99	53.614	Amphiprion_percula
ENSBTAG00000005385	POP5	89	55.921	ENSATEG00000016792	pop5	99	52.695	Anabas_testudineus
ENSBTAG00000005385	POP5	52	75.281	ENSAPLG00000015761	POP5	96	71.154	Anas_platyrhynchos
ENSBTAG00000005385	POP5	94	59.375	ENSACAG00000003091	POP5	96	59.375	Anolis_carolinensis
ENSBTAG00000005385	POP5	87	91.892	ENSANAG00000023744	POP5	100	85.294	Aotus_nancymaae
ENSBTAG00000005385	POP5	90	55.556	ENSACLG00000021131	-	99	55.090	Astatotilapia_calliptera
ENSBTAG00000005385	POP5	84	52.817	ENSAMXG00000038175	pop5	92	48.750	Astyanax_mexicanus
ENSBTAG00000005385	POP5	87	92.568	ENSCJAG00000001309	POP5	100	85.882	Callithrix_jacchus
ENSBTAG00000005385	POP5	100	91.176	ENSCAFG00000010389	POP5	100	91.176	Canis_familiaris
ENSBTAG00000005385	POP5	100	91.176	ENSCAFG00020020663	POP5	100	91.176	Canis_lupus_dingo
ENSBTAG00000005385	POP5	100	98.824	ENSCHIG00000016402	POP5	100	98.824	Capra_hircus
ENSBTAG00000005385	POP5	100	90.588	ENSTSYG00000027616	POP5	100	90.588	Carlito_syrichta
ENSBTAG00000005385	POP5	68	87.826	ENSCAPG00000016873	POP5	100	87.826	Cavia_aperea
ENSBTAG00000005385	POP5	100	89.412	ENSCPOG00000012337	POP5	100	89.412	Cavia_porcellus
ENSBTAG00000005385	POP5	87	91.892	ENSCCAG00000023154	POP5	100	85.294	Cebus_capucinus
ENSBTAG00000005385	POP5	87	93.243	ENSCATG00000036825	POP5	100	86.471	Cercocebus_atys
ENSBTAG00000005385	POP5	100	91.176	ENSCLAG00000007808	POP5	100	91.176	Chinchilla_lanigera
ENSBTAG00000005385	POP5	87	93.243	ENSCSAG00000002246	POP5	100	86.471	Chlorocebus_sabaeus
ENSBTAG00000005385	POP5	85	73.793	ENSCHOG00000013969	POP5	100	72.941	Choloepus_hoffmanni
ENSBTAG00000005385	POP5	96	68.293	ENSCPBG00000011331	POP5	96	68.293	Chrysemys_picta_bellii
ENSBTAG00000005385	POP5	87	92.568	ENSCANG00000028001	POP5	100	85.882	Colobus_angolensis_palliatus
ENSBTAG00000005385	POP5	100	86.471	ENSCGRG00001017974	Pop5	100	86.471	Cricetulus_griseus_chok1gshd
ENSBTAG00000005385	POP5	100	86.471	ENSCGRG00000010102	Pop5	100	86.471	Cricetulus_griseus_crigri
ENSBTAG00000005385	POP5	89	54.605	ENSCSEG00000008332	-	98	51.829	Cynoglossus_semilaevis
ENSBTAG00000005385	POP5	80	58.824	ENSCSEG00000011103	pop5	91	58.824	Cynoglossus_semilaevis
ENSBTAG00000005385	POP5	91	38.065	ENSCVAG00000009152	-	92	34.810	Cyprinodon_variegatus
ENSBTAG00000005385	POP5	84	53.472	ENSDARG00000053452	pop5	99	50.296	Danio_rerio
ENSBTAG00000005385	POP5	100	88.953	ENSDNOG00000012668	-	90	88.953	Dasypus_novemcinctus
ENSBTAG00000005385	POP5	100	90.588	ENSDNOG00000045952	-	100	90.588	Dasypus_novemcinctus
ENSBTAG00000005385	POP5	100	85.294	ENSDORG00000029401	Pop5	100	88.824	Dipodomys_ordii
ENSBTAG00000005385	POP5	84	30.986	FBgn0036696	CG14057	95	30.986	Drosophila_melanogaster
ENSBTAG00000005385	POP5	98	83.133	ENSETEG00000009283	POP5	98	83.133	Echinops_telfairi
ENSBTAG00000005385	POP5	86	43.537	ENSEBUG00000016369	pop5	90	43.537	Eptatretus_burgeri
ENSBTAG00000005385	POP5	100	91.176	ENSEASG00005004714	POP5	100	91.176	Equus_asinus_asinus
ENSBTAG00000005385	POP5	100	91.765	ENSECAG00000010012	POP5	100	91.765	Equus_caballus
ENSBTAG00000005385	POP5	94	56.604	ENSELUG00000023394	pop5	98	56.604	Esox_lucius
ENSBTAG00000005385	POP5	100	89.412	ENSFCAG00000042614	POP5	100	89.412	Felis_catus
ENSBTAG00000005385	POP5	89	72.368	ENSFALG00000007537	POP5	99	69.880	Ficedula_albicollis
ENSBTAG00000005385	POP5	86	91.837	ENSFDAG00000009972	POP5	98	90.303	Fukomys_damarensis
ENSBTAG00000005385	POP5	96	51.497	ENSFHEG00000022341	pop5	100	51.497	Fundulus_heteroclitus
ENSBTAG00000005385	POP5	76	61.240	ENSGMOG00000001073	pop5	98	61.240	Gadus_morhua
ENSBTAG00000005385	POP5	86	63.265	ENSGALG00000007124	POP5	59	59.281	Gallus_gallus
ENSBTAG00000005385	POP5	84	59.155	ENSGAFG00000005937	-	98	55.215	Gambusia_affinis
ENSBTAG00000005385	POP5	96	53.988	ENSGACG00000012710	-	100	53.988	Gasterosteus_aculeatus
ENSBTAG00000005385	POP5	98	68.047	ENSGAGG00000016005	POP5	99	68.047	Gopherus_agassizii
ENSBTAG00000005385	POP5	87	93.243	ENSGGOG00000013505	POP5	100	87.059	Gorilla_gorilla
ENSBTAG00000005385	POP5	90	55.556	ENSHBUG00000011718	-	99	55.090	Haplochromis_burtoni
ENSBTAG00000005385	POP5	100	88.235	ENSHGLG00000011786	POP5	100	88.235	Heterocephalus_glaber_female
ENSBTAG00000005385	POP5	100	88.235	ENSHGLG00100014284	POP5	100	88.235	Heterocephalus_glaber_male
ENSBTAG00000005385	POP5	84	54.930	ENSHCOG00000011809	pop5	99	50.307	Hippocampus_comes
ENSBTAG00000005385	POP5	88	50.667	ENSIPUG00000003437	pop5	99	48.503	Ictalurus_punctatus
ENSBTAG00000005385	POP5	100	89.412	ENSSTOG00000012577	POP5	100	89.412	Ictidomys_tridecemlineatus
ENSBTAG00000005385	POP5	97	87.952	ENSJJAG00000001080	Pop5	98	88.554	Jaculus_jaculus
ENSBTAG00000005385	POP5	86	54.422	ENSKMAG00000011158	-	99	51.176	Kryptolebias_marmoratus
ENSBTAG00000005385	POP5	92	53.165	ENSLBEG00000008652	pop5	92	52.071	Labrus_bergylta
ENSBTAG00000005385	POP5	92	62.658	ENSLACG00000018188	POP5	98	62.658	Latimeria_chalumnae
ENSBTAG00000005385	POP5	84	56.338	ENSLOCG00000002924	pop5	99	53.012	Lepisosteus_oculatus
ENSBTAG00000005385	POP5	100	86.047	ENSLAFG00000014545	POP5	100	86.047	Loxodonta_africana
ENSBTAG00000005385	POP5	87	93.243	ENSMFAG00000045933	POP5	99	90.968	Macaca_fascicularis
ENSBTAG00000005385	POP5	87	93.243	ENSMMUG00000040120	POP5	100	87.059	Macaca_mulatta
ENSBTAG00000005385	POP5	87	93.243	ENSMNEG00000041716	POP5	100	87.059	Macaca_nemestrina
ENSBTAG00000005385	POP5	87	93.919	ENSMLEG00000029377	POP5	100	87.647	Mandrillus_leucophaeus
ENSBTAG00000005385	POP5	84	57.746	ENSMAMG00000002108	pop5	98	53.374	Mastacembelus_armatus
ENSBTAG00000005385	POP5	90	55.556	ENSMZEG00005000069	-	99	55.090	Maylandia_zebra
ENSBTAG00000005385	POP5	100	87.647	ENSMAUG00000019670	Pop5	100	87.647	Mesocricetus_auratus
ENSBTAG00000005385	POP5	100	90.588	ENSMICG00000008692	POP5	100	90.588	Microcebus_murinus
ENSBTAG00000005385	POP5	100	80.000	ENSMOCG00000013322	Pop5	100	80.000	Microtus_ochrogaster
ENSBTAG00000005385	POP5	79	57.037	ENSMMOG00000010471	pop5	97	52.830	Mola_mola
ENSBTAG00000005385	POP5	100	74.118	ENSMODG00000003066	POP5	68	74.118	Monodelphis_domestica
ENSBTAG00000005385	POP5	87	58.108	ENSMALG00000017797	-	99	54.491	Monopterus_albus
ENSBTAG00000005385	POP5	100	85.294	MGP_CAROLIEiJ_G0027618	Pop5	100	85.294	Mus_caroli
ENSBTAG00000005385	POP5	100	85.294	ENSMUSG00000060152	Pop5	100	85.294	Mus_musculus
ENSBTAG00000005385	POP5	100	83.529	MGP_PahariEiJ_G0024198	Pop5	100	83.529	Mus_pahari
ENSBTAG00000005385	POP5	100	84.118	MGP_SPRETEiJ_G0028616	Pop5	100	84.118	Mus_spretus
ENSBTAG00000005385	POP5	88	92.000	ENSMPUG00000003221	POP5	100	87.647	Mustela_putorius_furo
ENSBTAG00000005385	POP5	98	89.881	ENSMLUG00000014657	POP5	99	89.881	Myotis_lucifugus
ENSBTAG00000005385	POP5	100	87.647	ENSNGAG00000002594	Pop5	99	88.166	Nannospalax_galili
ENSBTAG00000005385	POP5	66	58.036	ENSNBRG00000001020	-	83	58.036	Neolamprologus_brichardi
ENSBTAG00000005385	POP5	87	92.568	ENSNLEG00000015839	POP5	100	86.471	Nomascus_leucogenys
ENSBTAG00000005385	POP5	92	76.282	ENSMEUG00000015288	POP5	96	76.282	Notamacropus_eugenii
ENSBTAG00000005385	POP5	86	93.151	ENSOPRG00000004327	POP5	99	90.000	Ochotona_princeps
ENSBTAG00000005385	POP5	99	77.515	ENSODEG00000010351	-	100	77.515	Octodon_degus
ENSBTAG00000005385	POP5	100	89.412	ENSODEG00000006549	-	100	90.000	Octodon_degus
ENSBTAG00000005385	POP5	90	55.556	ENSONIG00000011172	pop5	99	55.689	Oreochromis_niloticus
ENSBTAG00000005385	POP5	68	73.276	ENSOANG00000001792	-	100	73.276	Ornithorhynchus_anatinus
ENSBTAG00000005385	POP5	99	90.533	ENSOCUG00000006537	POP5	99	90.533	Oryctolagus_cuniculus
ENSBTAG00000005385	POP5	100	49.412	ENSORLG00000014745	pop5	100	49.412	Oryzias_latipes
ENSBTAG00000005385	POP5	98	50.299	ENSORLG00020001168	pop5	98	50.299	Oryzias_latipes_hni
ENSBTAG00000005385	POP5	98	50.595	ENSORLG00015013535	pop5	98	50.595	Oryzias_latipes_hsok
ENSBTAG00000005385	POP5	96	51.807	ENSOMEG00000017643	pop5	99	51.807	Oryzias_melastigma
ENSBTAG00000005385	POP5	89	88.158	ENSOGAG00000008528	POP5	93	88.158	Otolemur_garnettii
ENSBTAG00000005385	POP5	100	97.674	ENSOARG00000012764	POP5	100	97.674	Ovis_aries
ENSBTAG00000005385	POP5	87	93.243	ENSPPAG00000043719	POP5	100	87.059	Pan_paniscus
ENSBTAG00000005385	POP5	100	89.412	ENSPPRG00000006474	POP5	100	89.412	Panthera_pardus
ENSBTAG00000005385	POP5	100	89.412	ENSPTIG00000012194	POP5	100	89.412	Panthera_tigris_altaica
ENSBTAG00000005385	POP5	87	93.243	ENSPTRG00000005543	POP5	100	87.059	Pan_troglodytes
ENSBTAG00000005385	POP5	87	93.243	ENSPANG00000014166	POP5	100	87.059	Papio_anubis
ENSBTAG00000005385	POP5	88	55.705	ENSPKIG00000025154	pop5	98	53.049	Paramormyrops_kingsleyae
ENSBTAG00000005385	POP5	65	70.909	ENSPSIG00000013154	POP5	85	70.909	Pelodiscus_sinensis
ENSBTAG00000005385	POP5	98	51.497	ENSPMGG00000000812	-	100	51.497	Periophthalmus_magnuspinnatus
ENSBTAG00000005385	POP5	100	84.118	ENSPEMG00000017493	Pop5	100	84.118	Peromyscus_maniculatus_bairdii
ENSBTAG00000005385	POP5	84	58.333	ENSPFOG00000013000	pop5	94	59.406	Poecilia_formosa
ENSBTAG00000005385	POP5	84	57.746	ENSPLAG00000014070	pop5	99	53.614	Poecilia_latipinna
ENSBTAG00000005385	POP5	85	57.639	ENSPMEG00000024039	pop5	99	54.217	Poecilia_mexicana
ENSBTAG00000005385	POP5	85	57.639	ENSPMEG00000012863	POP5	99	54.217	Poecilia_mexicana
ENSBTAG00000005385	POP5	84	59.155	ENSPREG00000020151	pop5	98	55.215	Poecilia_reticulata
ENSBTAG00000005385	POP5	87	92.568	ENSPPYG00000005036	POP5	83	89.375	Pongo_abelii
ENSBTAG00000005385	POP5	61	90.385	ENSPCAG00000004788	POP5	100	90.385	Procavia_capensis
ENSBTAG00000005385	POP5	100	90.588	ENSPCOG00000017618	POP5	100	90.588	Propithecus_coquereli
ENSBTAG00000005385	POP5	100	91.765	ENSPVAG00000002233	POP5	100	91.765	Pteropus_vampyrus
ENSBTAG00000005385	POP5	90	55.556	ENSPNYG00000002679	pop5	99	55.090	Pundamilia_nyererei
ENSBTAG00000005385	POP5	84	51.748	ENSPNAG00000012662	pop5	97	46.821	Pygocentrus_nattereri
ENSBTAG00000005385	POP5	94	85.625	ENSRNOG00000001199	Pop5	100	84.706	Rattus_norvegicus
ENSBTAG00000005385	POP5	86	92.466	ENSRBIG00000043505	POP5	96	92.715	Rhinopithecus_bieti
ENSBTAG00000005385	POP5	87	92.568	ENSRROG00000045063	POP5	96	92.715	Rhinopithecus_roxellana
ENSBTAG00000005385	POP5	87	92.568	ENSSBOG00000032691	POP5	100	91.176	Saimiri_boliviensis_boliviensis
ENSBTAG00000005385	POP5	84	55.634	ENSSFOG00015005630	pop5	100	53.254	Scleropages_formosus
ENSBTAG00000005385	POP5	87	56.667	ENSSMAG00000018868	pop5	99	53.254	Scophthalmus_maximus
ENSBTAG00000005385	POP5	98	54.491	ENSSDUG00000001282	-	99	54.491	Seriola_dumerili
ENSBTAG00000005385	POP5	98	53.892	ENSSLDG00000017031	pop5	99	55.357	Seriola_lalandi_dorsalis
ENSBTAG00000005385	POP5	98	53.892	ENSSLDG00000003801	-	99	55.357	Seriola_lalandi_dorsalis
ENSBTAG00000005385	POP5	61	94.231	ENSSARG00000005564	POP5	64	94.231	Sorex_araneus
ENSBTAG00000005385	POP5	84	72.535	ENSSPUG00000015531	POP5	98	68.098	Sphenodon_punctatus
ENSBTAG00000005385	POP5	89	59.868	ENSSPAG00000015306	pop5	99	58.084	Stegastes_partitus
ENSBTAG00000005385	POP5	100	93.529	ENSSSCG00000009912	POP5	100	93.529	Sus_scrofa
ENSBTAG00000005385	POP5	96	69.512	ENSTGUG00000009602	POP5	100	69.512	Taeniopygia_guttata
ENSBTAG00000005385	POP5	98	53.892	ENSTRUG00000016214	pop5	97	53.892	Takifugu_rubripes
ENSBTAG00000005385	POP5	96	53.988	ENSTNIG00000011465	pop5	96	53.659	Tetraodon_nigroviridis
ENSBTAG00000005385	POP5	100	89.412	ENSTBEG00000010131	POP5	100	89.412	Tupaia_belangeri
ENSBTAG00000005385	POP5	100	94.706	ENSTTRG00000000153	POP5	100	94.706	Tursiops_truncatus
ENSBTAG00000005385	POP5	96	87.805	ENSUAMG00000015541	POP5	76	87.805	Ursus_americanus
ENSBTAG00000005385	POP5	100	88.235	ENSUMAG00000006137	POP5	100	88.235	Ursus_maritimus
ENSBTAG00000005385	POP5	100	93.529	ENSVPAG00000010365	POP5	100	93.529	Vicugna_pacos
ENSBTAG00000005385	POP5	100	91.176	ENSVVUG00000021154	POP5	100	91.176	Vulpes_vulpes
ENSBTAG00000005385	POP5	54	69.565	ENSXETG00000031793	POP5	81	69.565	Xenopus_tropicalis
ENSBTAG00000005385	POP5	84	58.451	ENSXMAG00000003508	-	85	54.601	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process