EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000005436 (Gene tree)
Gene ID: 507486
Gene Symbol: SHQ1
Alias: -
Full Name: Bos taurus SHQ1%2C H/ACA ribonucleoprotein assembly factor (SHQ1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 103807 bases
Position: chr22:28835679-28939485
Accession: NM_001035049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000007154	SHQ1	PF04925.15	1.7e-69	1	1
ENSBTAP00000069750	SHQ1	PF04925.15	8.1e-52	1	2
ENSBTAP00000069750	SHQ1	PF04925.15	8.1e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000079665	-	2162	-	ENSBTAP00000069750	561 (aa)	-	-
ENSBTAT00000007154	-	2216	-	ENSBTAP00000007154	579 (aa)	-	Q3MHH1

Gene Model

Click here to download ENSBTAG00000005436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005436	SHQ1	100	80.379	ENSG00000144736	SHQ1	96	95.833	Homo_sapiens
ENSBTAG00000005436	SHQ1	76	61.521	ENSAPOG00000000397	shq1	90	53.203	Acanthochromis_polyacanthus
ENSBTAG00000005436	SHQ1	100	82.729	ENSAMEG00000015140	SHQ1	100	82.729	Ailuropoda_melanoleuca
ENSBTAG00000005436	SHQ1	76	61.348	ENSACIG00000021249	shq1	92	54.007	Amphilophus_citrinellus
ENSBTAG00000005436	SHQ1	76	63.311	ENSAOCG00000023311	shq1	93	53.650	Amphiprion_ocellaris
ENSBTAG00000005436	SHQ1	76	62.640	ENSAPEG00000021686	shq1	93	52.659	Amphiprion_percula
ENSBTAG00000005436	SHQ1	75	62.700	ENSATEG00000008475	shq1	89	55.596	Anabas_testudineus
ENSBTAG00000005436	SHQ1	88	64.118	ENSAPLG00000013926	SHQ1	99	63.601	Anas_platyrhynchos
ENSBTAG00000005436	SHQ1	98	60.453	ENSACAG00000014809	SHQ1	84	61.821	Anolis_carolinensis
ENSBTAG00000005436	SHQ1	100	79.620	ENSANAG00000029241	SHQ1	100	78.756	Aotus_nancymaae
ENSBTAG00000005436	SHQ1	99	61.717	ENSANAG00000030500	-	99	60.107	Aotus_nancymaae
ENSBTAG00000005436	SHQ1	76	60.179	ENSACLG00000023077	shq1	94	50.000	Astatotilapia_calliptera
ENSBTAG00000005436	SHQ1	74	55.787	ENSAMXG00000043822	shq1	65	59.103	Astyanax_mexicanus
ENSBTAG00000005436	SHQ1	74	33.560	WBGene00021655	Y48A5A.1	88	34.074	Caenorhabditis_elegans
ENSBTAG00000005436	SHQ1	100	79.690	ENSCJAG00000015131	SHQ1	100	78.830	Callithrix_jacchus
ENSBTAG00000005436	SHQ1	100	82.038	ENSCAFG00000006434	SHQ1	99	82.038	Canis_familiaris
ENSBTAG00000005436	SHQ1	100	81.865	ENSCAFG00020016743	SHQ1	99	81.865	Canis_lupus_dingo
ENSBTAG00000005436	SHQ1	100	96.373	ENSCHIG00000012271	SHQ1	91	96.373	Capra_hircus
ENSBTAG00000005436	SHQ1	99	75.979	ENSTSYG00000014439	SHQ1	99	75.445	Carlito_syrichta
ENSBTAG00000005436	SHQ1	91	66.221	ENSCAPG00000009343	SHQ1	96	90.909	Cavia_aperea
ENSBTAG00000005436	SHQ1	99	74.873	ENSCPOG00000011443	SHQ1	99	74.957	Cavia_porcellus
ENSBTAG00000005436	SHQ1	100	71.503	ENSCCAG00000027080	SHQ1	100	70.812	Cebus_capucinus
ENSBTAG00000005436	SHQ1	99	61.938	ENSCCAG00000036087	-	99	61.938	Cebus_capucinus
ENSBTAG00000005436	SHQ1	100	80.723	ENSCATG00000041238	SHQ1	100	79.518	Cercocebus_atys
ENSBTAG00000005436	SHQ1	99	75.212	ENSCLAG00000004206	SHQ1	99	76.552	Chinchilla_lanigera
ENSBTAG00000005436	SHQ1	85	77.033	ENSCSAG00000011514	SHQ1	100	75.610	Chlorocebus_sabaeus
ENSBTAG00000005436	SHQ1	50	95.000	ENSCHOG00000003273	-	84	95.000	Choloepus_hoffmanni
ENSBTAG00000005436	SHQ1	98	64.623	ENSCPBG00000006441	SHQ1	93	64.860	Chrysemys_picta_bellii
ENSBTAG00000005436	SHQ1	69	43.392	ENSCING00000008013	-	85	42.857	Ciona_intestinalis
ENSBTAG00000005436	SHQ1	68	42.714	ENSCSAVG00000002332	-	88	42.211	Ciona_savignyi
ENSBTAG00000005436	SHQ1	99	79.861	ENSCANG00000039295	SHQ1	100	79.340	Colobus_angolensis_palliatus
ENSBTAG00000005436	SHQ1	100	74.138	ENSCGRG00001012583	Shq1	100	83.197	Cricetulus_griseus_chok1gshd
ENSBTAG00000005436	SHQ1	100	74.138	ENSCGRG00000009849	Shq1	100	83.197	Cricetulus_griseus_crigri
ENSBTAG00000005436	SHQ1	72	62.201	ENSCSEG00000007829	shq1	91	51.759	Cynoglossus_semilaevis
ENSBTAG00000005436	SHQ1	75	61.556	ENSCVAG00000020049	shq1	98	51.933	Cyprinodon_variegatus
ENSBTAG00000005436	SHQ1	75	59.404	ENSDARG00000058522	shq1	66	60.050	Danio_rerio
ENSBTAG00000005436	SHQ1	100	80.862	ENSDNOG00000033937	SHQ1	100	80.862	Dasypus_novemcinctus
ENSBTAG00000005436	SHQ1	99	65.345	ENSETEG00000005766	SHQ1	99	65.345	Echinops_telfairi
ENSBTAG00000005436	SHQ1	64	47.872	ENSEBUG00000005445	shq1	69	50.974	Eptatretus_burgeri
ENSBTAG00000005436	SHQ1	100	83.420	ENSEASG00005002237	SHQ1	100	83.420	Equus_asinus_asinus
ENSBTAG00000005436	SHQ1	97	84.369	ENSECAG00000015673	SHQ1	95	84.369	Equus_caballus
ENSBTAG00000005436	SHQ1	100	79.793	ENSEEUG00000010568	SHQ1	100	79.793	Erinaceus_europaeus
ENSBTAG00000005436	SHQ1	67	58.763	ENSELUG00000003476	shq1	89	53.240	Esox_lucius
ENSBTAG00000005436	SHQ1	100	81.174	ENSFCAG00000012781	SHQ1	100	81.174	Felis_catus
ENSBTAG00000005436	SHQ1	96	62.950	ENSFALG00000013428	SHQ1	91	63.196	Ficedula_albicollis
ENSBTAG00000005436	SHQ1	98	72.513	ENSFDAG00000005595	SHQ1	90	72.513	Fukomys_damarensis
ENSBTAG00000005436	SHQ1	75	61.416	ENSFHEG00000017552	shq1	95	52.797	Fundulus_heteroclitus
ENSBTAG00000005436	SHQ1	68	58.438	ENSGMOG00000007350	shq1	100	58.690	Gadus_morhua
ENSBTAG00000005436	SHQ1	99	61.407	ENSGALG00000007798	SHQ1	94	61.407	Gallus_gallus
ENSBTAG00000005436	SHQ1	68	60.957	ENSGACG00000011797	shq1	100	61.209	Gasterosteus_aculeatus
ENSBTAG00000005436	SHQ1	100	79.862	ENSGGOG00000034818	SHQ1	100	78.657	Gorilla_gorilla
ENSBTAG00000005436	SHQ1	76	60.268	ENSHBUG00000010857	shq1	80	58.621	Haplochromis_burtoni
ENSBTAG00000005436	SHQ1	99	74.155	ENSHGLG00000003637	SHQ1	91	73.096	Heterocephalus_glaber_female
ENSBTAG00000005436	SHQ1	99	74.407	ENSHGLG00100011957	SHQ1	90	73.469	Heterocephalus_glaber_male
ENSBTAG00000005436	SHQ1	94	52.737	ENSHCOG00000010799	shq1	90	53.102	Hippocampus_comes
ENSBTAG00000005436	SHQ1	75	59.132	ENSIPUG00000001247	shq1	68	59.500	Ictalurus_punctatus
ENSBTAG00000005436	SHQ1	96	73.874	ENSSTOG00000010043	SHQ1	97	74.640	Ictidomys_tridecemlineatus
ENSBTAG00000005436	SHQ1	100	75.130	ENSJJAG00000017611	Shq1	100	82.377	Jaculus_jaculus
ENSBTAG00000005436	SHQ1	96	54.240	ENSKMAG00000004457	shq1	91	52.931	Kryptolebias_marmoratus
ENSBTAG00000005436	SHQ1	99	57.778	ENSLACG00000014243	SHQ1	87	59.691	Latimeria_chalumnae
ENSBTAG00000005436	SHQ1	96	56.989	ENSLOCG00000009970	shq1	96	56.631	Lepisosteus_oculatus
ENSBTAG00000005436	SHQ1	99	58.966	ENSMFAG00000037396	-	99	57.831	Macaca_fascicularis
ENSBTAG00000005436	SHQ1	100	80.723	ENSMFAG00000039148	SHQ1	100	79.518	Macaca_fascicularis
ENSBTAG00000005436	SHQ1	99	58.793	ENSMMUG00000021761	-	99	57.659	Macaca_mulatta
ENSBTAG00000005436	SHQ1	92	79.174	ENSMMUG00000009571	SHQ1	96	77.861	Macaca_mulatta
ENSBTAG00000005436	SHQ1	100	80.723	ENSMNEG00000032667	SHQ1	100	79.518	Macaca_nemestrina
ENSBTAG00000005436	SHQ1	100	80.551	ENSMLEG00000038493	SHQ1	100	79.346	Mandrillus_leucophaeus
ENSBTAG00000005436	SHQ1	99	50.984	ENSMAMG00000023432	shq1	91	52.073	Mastacembelus_armatus
ENSBTAG00000005436	SHQ1	76	60.179	ENSMZEG00005008649	shq1	94	52.911	Maylandia_zebra
ENSBTAG00000005436	SHQ1	99	60.549	ENSMGAG00000009640	SHQ1	94	60.549	Meleagris_gallopavo
ENSBTAG00000005436	SHQ1	100	74.138	ENSMAUG00000022030	Shq1	100	84.016	Mesocricetus_auratus
ENSBTAG00000005436	SHQ1	100	77.853	ENSMICG00000009224	SHQ1	100	76.792	Microcebus_murinus
ENSBTAG00000005436	SHQ1	100	72.586	ENSMOCG00000017836	Shq1	100	82.787	Microtus_ochrogaster
ENSBTAG00000005436	SHQ1	75	60.690	ENSMMOG00000010569	shq1	66	61.209	Mola_mola
ENSBTAG00000005436	SHQ1	95	64.130	ENSMODG00000003926	SHQ1	98	64.130	Monodelphis_domestica
ENSBTAG00000005436	SHQ1	98	55.070	ENSMALG00000008870	shq1	92	54.196	Monopterus_albus
ENSBTAG00000005436	SHQ1	91	82.377	MGP_CAROLIEiJ_G0028689	Shq1	100	82.377	Mus_caroli
ENSBTAG00000005436	SHQ1	100	74.138	ENSMUSG00000035378	Shq1	100	81.967	Mus_musculus
ENSBTAG00000005436	SHQ1	100	74.828	MGP_PahariEiJ_G0022440	Shq1	100	83.197	Mus_pahari
ENSBTAG00000005436	SHQ1	100	73.966	MGP_SPRETEiJ_G0029717	Shq1	100	81.148	Mus_spretus
ENSBTAG00000005436	SHQ1	100	82.556	ENSMPUG00000017006	SHQ1	98	82.556	Mustela_putorius_furo
ENSBTAG00000005436	SHQ1	89	76.255	ENSMLUG00000013539	SHQ1	97	76.255	Myotis_lucifugus
ENSBTAG00000005436	SHQ1	98	67.254	ENSNGAG00000023317	Shq1	99	66.901	Nannospalax_galili
ENSBTAG00000005436	SHQ1	61	58.496	ENSNBRG00000024004	shq1	77	56.683	Neolamprologus_brichardi
ENSBTAG00000005436	SHQ1	100	80.551	ENSNLEG00000002731	SHQ1	100	79.346	Nomascus_leucogenys
ENSBTAG00000005436	SHQ1	83	65.741	ENSMEUG00000009350	-	89	65.741	Notamacropus_eugenii
ENSBTAG00000005436	SHQ1	98	73.063	ENSODEG00000009192	SHQ1	97	84.583	Octodon_degus
ENSBTAG00000005436	SHQ1	99	76.752	ENSOCUG00000016695	SHQ1	99	76.501	Oryctolagus_cuniculus
ENSBTAG00000005436	SHQ1	74	59.954	ENSORLG00000023538	shq1	80	59.193	Oryzias_latipes
ENSBTAG00000005436	SHQ1	74	60.417	ENSORLG00020003697	shq1	79	59.641	Oryzias_latipes_hni
ENSBTAG00000005436	SHQ1	74	58.430	ENSORLG00015021040	shq1	80	59.465	Oryzias_latipes_hsok
ENSBTAG00000005436	SHQ1	74	60.880	ENSOMEG00000001225	shq1	70	61.307	Oryzias_melastigma
ENSBTAG00000005436	SHQ1	98	78.957	ENSOGAG00000003898	SHQ1	100	78.957	Otolemur_garnettii
ENSBTAG00000005436	SHQ1	100	95.034	ENSOARG00000009547	SHQ1	100	95.034	Ovis_aries
ENSBTAG00000005436	SHQ1	99	59.794	ENSPPAG00000043263	-	99	58.763	Pan_paniscus
ENSBTAG00000005436	SHQ1	100	80.379	ENSPPAG00000027714	SHQ1	100	79.174	Pan_paniscus
ENSBTAG00000005436	SHQ1	100	81.865	ENSPPRG00000004769	SHQ1	100	81.865	Panthera_pardus
ENSBTAG00000005436	SHQ1	100	77.547	ENSPTIG00000011478	SHQ1	100	77.547	Panthera_tigris_altaica
ENSBTAG00000005436	SHQ1	99	59.107	ENSPTRG00000048303	-	99	58.076	Pan_troglodytes
ENSBTAG00000005436	SHQ1	100	80.379	ENSPTRG00000015106	SHQ1	100	79.174	Pan_troglodytes
ENSBTAG00000005436	SHQ1	100	80.034	ENSPANG00000002881	SHQ1	100	81.067	Papio_anubis
ENSBTAG00000005436	SHQ1	99	49.476	ENSPKIG00000021517	shq1	93	48.691	Paramormyrops_kingsleyae
ENSBTAG00000005436	SHQ1	99	64.049	ENSPSIG00000005536	SHQ1	93	64.286	Pelodiscus_sinensis
ENSBTAG00000005436	SHQ1	76	59.453	ENSPMGG00000008838	shq1	73	58.503	Periophthalmus_magnuspinnatus
ENSBTAG00000005436	SHQ1	100	75.517	ENSPEMG00000000251	Shq1	100	84.836	Peromyscus_maniculatus_bairdii
ENSBTAG00000005436	SHQ1	77	56.167	ENSPMAG00000005372	shq1	100	56.388	Petromyzon_marinus
ENSBTAG00000005436	SHQ1	75	60.137	ENSPFOG00000003118	shq1	97	50.086	Poecilia_formosa
ENSBTAG00000005436	SHQ1	60	57.759	ENSPMEG00000011076	shq1	99	49.072	Poecilia_mexicana
ENSBTAG00000005436	SHQ1	68	55.637	ENSPREG00000000591	shq1	96	44.505	Poecilia_reticulata
ENSBTAG00000005436	SHQ1	100	80.207	ENSPPYG00000013717	SHQ1	100	78.830	Pongo_abelii
ENSBTAG00000005436	SHQ1	96	80.036	ENSPCAG00000009035	SHQ1	99	78.873	Procavia_capensis
ENSBTAG00000005436	SHQ1	100	77.304	ENSPCOG00000008415	SHQ1	100	79.352	Propithecus_coquereli
ENSBTAG00000005436	SHQ1	100	82.556	ENSPVAG00000017392	SHQ1	100	82.556	Pteropus_vampyrus
ENSBTAG00000005436	SHQ1	76	60.449	ENSPNYG00000003878	shq1	80	57.927	Pundamilia_nyererei
ENSBTAG00000005436	SHQ1	74	59.908	ENSPNAG00000026840	shq1	88	51.568	Pygocentrus_nattereri
ENSBTAG00000005436	SHQ1	100	70.724	ENSRNOG00000005433	Shq1	100	70.724	Rattus_norvegicus
ENSBTAG00000005436	SHQ1	99	75.910	ENSRBIG00000026280	SHQ1	100	76.603	Rhinopithecus_bieti
ENSBTAG00000005436	SHQ1	99	79.861	ENSRROG00000034126	SHQ1	100	79.514	Rhinopithecus_roxellana
ENSBTAG00000005436	SHQ1	99	70.619	ENSSBOG00000021038	SHQ1	99	70.984	Saimiri_boliviensis_boliviensis
ENSBTAG00000005436	SHQ1	96	63.734	ENSSHAG00000015077	SHQ1	98	64.452	Sarcophilus_harrisii
ENSBTAG00000005436	SHQ1	78	62.555	ENSSFOG00015016241	shq1	91	54.270	Scleropages_formosus
ENSBTAG00000005436	SHQ1	76	62.754	ENSSMAG00000016151	shq1	72	62.754	Scophthalmus_maximus
ENSBTAG00000005436	SHQ1	72	63.942	ENSSDUG00000011986	shq1	93	54.296	Seriola_dumerili
ENSBTAG00000005436	SHQ1	72	63.043	ENSSLDG00000013908	shq1	93	54.419	Seriola_lalandi_dorsalis
ENSBTAG00000005436	SHQ1	100	65.803	ENSSARG00000007119	SHQ1	100	63.903	Sorex_araneus
ENSBTAG00000005436	SHQ1	83	62.062	ENSSPUG00000011526	-	90	62.062	Sphenodon_punctatus
ENSBTAG00000005436	SHQ1	100	82.729	ENSSSCG00000011518	SHQ1	100	82.729	Sus_scrofa
ENSBTAG00000005436	SHQ1	96	62.143	ENSTGUG00000009933	SHQ1	96	61.786	Taeniopygia_guttata
ENSBTAG00000005436	SHQ1	72	58.852	ENSTRUG00000009446	shq1	97	50.759	Takifugu_rubripes
ENSBTAG00000005436	SHQ1	72	57.933	ENSTNIG00000007354	shq1	87	57.895	Tetraodon_nigroviridis
ENSBTAG00000005436	SHQ1	72	100.000	ENSTBEG00000011295	SHQ1	80	100.000	Tupaia_belangeri
ENSBTAG00000005436	SHQ1	100	88.256	ENSTTRG00000005320	SHQ1	100	88.256	Tursiops_truncatus
ENSBTAG00000005436	SHQ1	98	80.668	ENSUMAG00000024031	SHQ1	98	80.668	Ursus_maritimus
ENSBTAG00000005436	SHQ1	92	75.564	ENSVPAG00000004880	SHQ1	100	75.940	Vicugna_pacos
ENSBTAG00000005436	SHQ1	100	82.729	ENSVVUG00000013906	SHQ1	99	82.729	Vulpes_vulpes
ENSBTAG00000005436	SHQ1	75	65.747	ENSXETG00000032215	shq1	93	55.052	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005654	nucleoplasm	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005829	cytosol	-	IEA	Component
GO:0022618	ribonucleoprotein complex assembly	-	ISS	Process
GO:0043065	positive regulation of apoptotic process	-	IEA	Process
GO:2000233	negative regulation of rRNA processing	-	IEA	Process