EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000005577 (Gene tree)
Gene ID: 505618
Gene Symbol: RNASEH2C
Alias: -
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 1320 bases
Position: chr29:43886441-43887760
Accession: 34001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000007327	RNase_H2_suC	PF08615.11	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000007327	-	784	-	ENSBTAP00000007327	165 (aa)	-	Q2M2U4

Gene Model

Click here to download ENSBTAG00000005577's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005577	RNASEH2C	100	67.857	ENSG00000172922	RNASEH2C	100	67.857	Homo_sapiens
ENSBTAG00000005577	RNASEH2C	100	73.684	ENSAMEG00000017348	RNASEH2C	100	73.684	Ailuropoda_melanoleuca
ENSBTAG00000005577	RNASEH2C	100	69.643	ENSANAG00000032535	RNASEH2C	100	69.643	Aotus_nancymaae
ENSBTAG00000005577	RNASEH2C	100	67.857	ENSCJAG00000001965	RNASEH2C	100	67.857	Callithrix_jacchus
ENSBTAG00000005577	RNASEH2C	100	73.214	ENSCAFG00000013292	RNASEH2C	100	73.214	Canis_familiaris
ENSBTAG00000005577	RNASEH2C	100	73.214	ENSCAFG00020015077	RNASEH2C	100	73.214	Canis_lupus_dingo
ENSBTAG00000005577	RNASEH2C	100	95.152	ENSCHIG00000013681	RNASEH2C	100	95.152	Capra_hircus
ENSBTAG00000005577	RNASEH2C	65	70.370	ENSTSYG00000028658	-	65	70.370	Carlito_syrichta
ENSBTAG00000005577	RNASEH2C	100	63.030	ENSCPOG00000013696	RNASEH2C	100	63.030	Cavia_porcellus
ENSBTAG00000005577	RNASEH2C	100	69.048	ENSCCAG00000025461	RNASEH2C	100	69.048	Cebus_capucinus
ENSBTAG00000005577	RNASEH2C	99	65.244	ENSCLAG00000016534	RNASEH2C	99	65.244	Chinchilla_lanigera
ENSBTAG00000005577	RNASEH2C	100	69.643	ENSCSAG00000007985	RNASEH2C	100	69.643	Chlorocebus_sabaeus
ENSBTAG00000005577	RNASEH2C	100	67.262	ENSCANG00000039373	RNASEH2C	100	67.262	Colobus_angolensis_palliatus
ENSBTAG00000005577	RNASEH2C	100	68.072	ENSCGRG00001015383	Rnaseh2c	100	68.072	Cricetulus_griseus_chok1gshd
ENSBTAG00000005577	RNASEH2C	100	68.072	ENSCGRG00000012179	Rnaseh2c	100	68.072	Cricetulus_griseus_crigri
ENSBTAG00000005577	RNASEH2C	100	64.881	ENSDNOG00000035155	RNASEH2C	99	66.864	Dasypus_novemcinctus
ENSBTAG00000005577	RNASEH2C	100	66.265	ENSDORG00000023624	Rnaseh2c	100	66.265	Dipodomys_ordii
ENSBTAG00000005577	RNASEH2C	52	63.953	ENSETEG00000015293	-	81	63.953	Echinops_telfairi
ENSBTAG00000005577	RNASEH2C	75	64.844	ENSETEG00000020048	-	100	64.844	Echinops_telfairi
ENSBTAG00000005577	RNASEH2C	100	71.687	ENSEASG00005004302	RNASEH2C	100	71.687	Equus_asinus_asinus
ENSBTAG00000005577	RNASEH2C	100	72.289	ENSECAG00000017289	RNASEH2C	100	72.289	Equus_caballus
ENSBTAG00000005577	RNASEH2C	100	71.930	ENSFCAG00000044095	RNASEH2C	100	71.930	Felis_catus
ENSBTAG00000005577	RNASEH2C	100	54.857	ENSFDAG00000011974	RNASEH2C	100	54.857	Fukomys_damarensis
ENSBTAG00000005577	RNASEH2C	100	65.868	ENSHGLG00000013478	RNASEH2C	100	65.868	Heterocephalus_glaber_female
ENSBTAG00000005577	RNASEH2C	100	65.868	ENSHGLG00100019352	RNASEH2C	100	65.868	Heterocephalus_glaber_male
ENSBTAG00000005577	RNASEH2C	100	69.364	ENSSTOG00000019410	RNASEH2C	100	69.364	Ictidomys_tridecemlineatus
ENSBTAG00000005577	RNASEH2C	100	69.697	ENSJJAG00000019320	Rnaseh2c	100	69.697	Jaculus_jaculus
ENSBTAG00000005577	RNASEH2C	100	65.116	ENSLAFG00000015641	RNASEH2C	100	65.116	Loxodonta_africana
ENSBTAG00000005577	RNASEH2C	100	68.452	ENSMFAG00000042754	-	100	68.452	Macaca_fascicularis
ENSBTAG00000005577	RNASEH2C	100	69.643	ENSMFAG00000038096	-	100	69.643	Macaca_fascicularis
ENSBTAG00000005577	RNASEH2C	100	69.091	ENSMMUG00000016234	-	100	69.091	Macaca_mulatta
ENSBTAG00000005577	RNASEH2C	98	66.667	ENSMMUG00000019837	RNASEH2C	74	66.667	Macaca_mulatta
ENSBTAG00000005577	RNASEH2C	100	69.643	ENSMNEG00000040939	RNASEH2C	100	69.643	Macaca_nemestrina
ENSBTAG00000005577	RNASEH2C	100	66.272	ENSMAUG00000016346	Rnaseh2c	100	66.272	Mesocricetus_auratus
ENSBTAG00000005577	RNASEH2C	100	70.000	ENSMICG00000008882	RNASEH2C	100	70.000	Microcebus_murinus
ENSBTAG00000005577	RNASEH2C	100	63.095	ENSMOCG00000013231	Rnaseh2c	100	63.095	Microtus_ochrogaster
ENSBTAG00000005577	RNASEH2C	90	48.684	ENSMODG00000009547	-	90	48.684	Monodelphis_domestica
ENSBTAG00000005577	RNASEH2C	100	63.855	MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.855	Mus_caroli
ENSBTAG00000005577	RNASEH2C	100	65.060	ENSMUSG00000024925	Rnaseh2c	100	65.060	Mus_musculus
ENSBTAG00000005577	RNASEH2C	100	64.458	MGP_PahariEiJ_G0014057	Rnaseh2c	100	64.458	Mus_pahari
ENSBTAG00000005577	RNASEH2C	100	72.093	ENSMPUG00000011629	RNASEH2C	100	72.093	Mustela_putorius_furo
ENSBTAG00000005577	RNASEH2C	100	68.452	ENSMLUG00000008777	RNASEH2C	100	68.452	Myotis_lucifugus
ENSBTAG00000005577	RNASEH2C	100	55.152	ENSNGAG00000020391	Rnaseh2c	100	55.152	Nannospalax_galili
ENSBTAG00000005577	RNASEH2C	100	66.071	ENSNLEG00000005833	-	100	66.071	Nomascus_leucogenys
ENSBTAG00000005577	RNASEH2C	92	45.395	ENSMEUG00000006205	-	93	45.395	Notamacropus_eugenii
ENSBTAG00000005577	RNASEH2C	100	67.470	ENSODEG00000017806	RNASEH2C	100	67.470	Octodon_degus
ENSBTAG00000005577	RNASEH2C	100	69.942	ENSOGAG00000014128	RNASEH2C	100	69.942	Otolemur_garnettii
ENSBTAG00000005577	RNASEH2C	100	95.758	ENSOARG00000017675	RNASEH2C	100	95.758	Ovis_aries
ENSBTAG00000005577	RNASEH2C	100	65.089	ENSPPAG00000042592	-	84	65.089	Pan_paniscus
ENSBTAG00000005577	RNASEH2C	100	71.345	ENSPPRG00000000774	RNASEH2C	100	71.345	Panthera_pardus
ENSBTAG00000005577	RNASEH2C	100	69.006	ENSPTIG00000011677	RNASEH2C	100	69.006	Panthera_tigris_altaica
ENSBTAG00000005577	RNASEH2C	100	68.452	ENSPTRG00000038742	RNASEH2C	100	68.452	Pan_troglodytes
ENSBTAG00000005577	RNASEH2C	99	66.467	ENSPANG00000015965	RNASEH2C	66	66.467	Papio_anubis
ENSBTAG00000005577	RNASEH2C	100	65.060	ENSPEMG00000018577	Rnaseh2c	100	65.060	Peromyscus_maniculatus_bairdii
ENSBTAG00000005577	RNASEH2C	100	67.857	ENSPPYG00000003051	RNASEH2C	100	67.857	Pongo_abelii
ENSBTAG00000005577	RNASEH2C	100	62.791	ENSPCAG00000007887	RNASEH2C	100	63.429	Procavia_capensis
ENSBTAG00000005577	RNASEH2C	100	67.059	ENSPCOG00000021092	RNASEH2C	100	67.059	Propithecus_coquereli
ENSBTAG00000005577	RNASEH2C	100	70.482	ENSPVAG00000016950	RNASEH2C	100	70.482	Pteropus_vampyrus
ENSBTAG00000005577	RNASEH2C	100	65.060	ENSRNOG00000020700	Rnaseh2c	100	65.060	Rattus_norvegicus
ENSBTAG00000005577	RNASEH2C	99	65.663	ENSRBIG00000040124	RNASEH2C	66	65.663	Rhinopithecus_bieti
ENSBTAG00000005577	RNASEH2C	99	65.663	ENSRROG00000044910	RNASEH2C	99	67.500	Rhinopithecus_roxellana
ENSBTAG00000005577	RNASEH2C	100	69.643	ENSSBOG00000034781	RNASEH2C	100	69.643	Saimiri_boliviensis_boliviensis
ENSBTAG00000005577	RNASEH2C	100	76.048	ENSSSCG00000012979	RNASEH2C	100	76.048	Sus_scrofa
ENSBTAG00000005577	RNASEH2C	100	58.182	ENSTTRG00000016928	RNASEH2C	100	58.182	Tursiops_truncatus
ENSBTAG00000005577	RNASEH2C	100	71.930	ENSUAMG00000020793	RNASEH2C	100	71.930	Ursus_americanus
ENSBTAG00000005577	RNASEH2C	100	71.345	ENSUMAG00000010791	RNASEH2C	100	71.345	Ursus_maritimus
ENSBTAG00000005577	RNASEH2C	95	66.456	ENSVPAG00000006579	RNASEH2C	100	66.456	Vicugna_pacos
ENSBTAG00000005577	RNASEH2C	96	69.565	ENSVVUG00000027076	RNASEH2C	77	69.565	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0006401	RNA catabolic process	-	ISS	Process
GO:0032299	ribonuclease H2 complex	-	ISS	Component