EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000005587 (Gene tree)
Gene ID: 100139548
Gene Symbol: SKIV2L
Alias: 170A|DDX13|HLP|SKI2W|SKIV2|SKIV2L1
Full Name: helicase SKI2W
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 9951 bases
Position: chr23:27399292-27409242
Accession: 100139548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000007339	rRNA_proc-arch	PF13234.6	4.8e-42	1	1
ENSBTAP00000007339	DEAD	PF00270.29	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000007339	SKIV2L-201	3741	XM_003587695	ENSBTAP00000007339	1246 (aa)	XP_003587743	E1BMS0

Gene Model

Click here to download ENSBTAG00000005587's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005587's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000005587	SKIV2L	76	37.267	ENSBTAG00000010518	MTREX	88	37.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005587	SKIV2L	100	94.703	ENSG00000204351	SKIV2L	100	94.703	Homo_sapiens
ENSBTAG00000005587	SKIV2L	99	61.410	ENSAPOG00000008257	skiv2l	99	61.606	Acanthochromis_polyacanthus
ENSBTAG00000005587	SKIV2L	100	95.506	ENSAMEG00000002078	SKIV2L	100	95.506	Ailuropoda_melanoleuca
ENSBTAG00000005587	SKIV2L	99	59.856	ENSACIG00000016719	skiv2l	99	59.629	Amphilophus_citrinellus
ENSBTAG00000005587	SKIV2L	99	60.952	ENSAOCG00000017352	skiv2l	99	61.044	Amphiprion_ocellaris
ENSBTAG00000005587	SKIV2L	99	60.794	ENSAPEG00000001055	skiv2l	99	60.884	Amphiprion_percula
ENSBTAG00000005587	SKIV2L	99	60.621	ENSATEG00000007601	skiv2l	99	60.514	Anabas_testudineus
ENSBTAG00000005587	SKIV2L	99	65.122	ENSACAG00000011746	SKIV2L	99	65.657	Anolis_carolinensis
ENSBTAG00000005587	SKIV2L	100	95.185	ENSANAG00000037992	SKIV2L	100	95.185	Aotus_nancymaae
ENSBTAG00000005587	SKIV2L	99	61.410	ENSACLG00000006886	skiv2l	99	61.365	Astatotilapia_calliptera
ENSBTAG00000005587	SKIV2L	98	59.167	ENSAMXG00000011517	skiv2l	99	58.993	Astyanax_mexicanus
ENSBTAG00000005587	SKIV2L	96	39.735	WBGene00008502	skih-2	99	39.720	Caenorhabditis_elegans
ENSBTAG00000005587	SKIV2L	100	94.703	ENSCJAG00000002263	SKIV2L	100	94.703	Callithrix_jacchus
ENSBTAG00000005587	SKIV2L	100	95.185	ENSCAFG00000000679	SKIV2L	100	95.185	Canis_familiaris
ENSBTAG00000005587	SKIV2L	100	95.104	ENSCAFG00020000948	SKIV2L	100	95.104	Canis_lupus_dingo
ENSBTAG00000005587	SKIV2L	100	98.876	ENSCHIG00000012897	SKIV2L	100	98.876	Capra_hircus
ENSBTAG00000005587	SKIV2L	100	94.382	ENSTSYG00000012133	SKIV2L	100	94.382	Carlito_syrichta
ENSBTAG00000005587	SKIV2L	100	92.456	ENSCPOG00000001307	SKIV2L	100	92.456	Cavia_porcellus
ENSBTAG00000005587	SKIV2L	100	95.265	ENSCCAG00000026206	SKIV2L	100	95.265	Cebus_capucinus
ENSBTAG00000005587	SKIV2L	100	94.703	ENSCATG00000036901	SKIV2L	100	94.703	Cercocebus_atys
ENSBTAG00000005587	SKIV2L	100	93.258	ENSCLAG00000007678	SKIV2L	100	93.258	Chinchilla_lanigera
ENSBTAG00000005587	SKIV2L	100	94.543	ENSCSAG00000008988	SKIV2L	100	94.543	Chlorocebus_sabaeus
ENSBTAG00000005587	SKIV2L	87	64.327	ENSCPBG00000000343	SKIV2L	96	64.537	Chrysemys_picta_bellii
ENSBTAG00000005587	SKIV2L	94	51.224	ENSCING00000005576	-	99	51.100	Ciona_intestinalis
ENSBTAG00000005587	SKIV2L	99	94.859	ENSCANG00000039709	SKIV2L	100	94.859	Colobus_angolensis_palliatus
ENSBTAG00000005587	SKIV2L	100	94.226	ENSCGRG00001008385	Skiv2l	100	94.226	Cricetulus_griseus_chok1gshd
ENSBTAG00000005587	SKIV2L	99	60.956	ENSCSEG00000011326	skiv2l	98	60.870	Cynoglossus_semilaevis
ENSBTAG00000005587	SKIV2L	99	61.373	ENSCVAG00000003072	skiv2l	99	61.156	Cyprinodon_variegatus
ENSBTAG00000005587	SKIV2L	99	59.984	ENSDARG00000062206	skiv2l	99	59.840	Danio_rerio
ENSBTAG00000005587	SKIV2L	100	87.990	ENSDNOG00000037590	SKIV2L	100	88.489	Dasypus_novemcinctus
ENSBTAG00000005587	SKIV2L	93	43.839	FBgn0039117	tst	97	44.091	Drosophila_melanogaster
ENSBTAG00000005587	SKIV2L	72	92.931	ENSETEG00000009522	SKIV2L	72	94.444	Echinops_telfairi
ENSBTAG00000005587	SKIV2L	89	56.321	ENSEBUG00000013680	-	95	56.788	Eptatretus_burgeri
ENSBTAG00000005587	SKIV2L	93	95.869	ENSEASG00005015534	SKIV2L	100	95.869	Equus_asinus_asinus
ENSBTAG00000005587	SKIV2L	96	95.126	ENSECAG00000021823	SKIV2L	96	95.763	Equus_caballus
ENSBTAG00000005587	SKIV2L	54	99.209	ENSEEUG00000005049	SKIV2L	57	99.209	Erinaceus_europaeus
ENSBTAG00000005587	SKIV2L	99	59.652	ENSELUG00000000181	skiv2l	94	66.286	Esox_lucius
ENSBTAG00000005587	SKIV2L	100	95.746	ENSFCAG00000004519	SKIV2L	100	95.746	Felis_catus
ENSBTAG00000005587	SKIV2L	100	90.136	ENSFDAG00000009438	SKIV2L	100	90.217	Fukomys_damarensis
ENSBTAG00000005587	SKIV2L	99	60.887	ENSFHEG00000008853	skiv2l	99	60.995	Fundulus_heteroclitus
ENSBTAG00000005587	SKIV2L	99	59.392	ENSGMOG00000005926	skiv2l	98	59.416	Gadus_morhua
ENSBTAG00000005587	SKIV2L	79	60.529	ENSGALG00000035499	SKIV2L	98	61.531	Gallus_gallus
ENSBTAG00000005587	SKIV2L	99	61.441	ENSGAFG00000002382	skiv2l	99	61.396	Gambusia_affinis
ENSBTAG00000005587	SKIV2L	99	60.382	ENSGACG00000002927	skiv2l	98	60.582	Gasterosteus_aculeatus
ENSBTAG00000005587	SKIV2L	100	94.623	ENSGGOG00000002270	SKIV2L	100	94.623	Gorilla_gorilla
ENSBTAG00000005587	SKIV2L	99	61.252	ENSHBUG00000000726	skiv2l	99	61.205	Haplochromis_burtoni
ENSBTAG00000005587	SKIV2L	100	91.106	ENSHGLG00000016596	SKIV2L	100	91.587	Heterocephalus_glaber_female
ENSBTAG00000005587	SKIV2L	100	88.542	ENSHGLG00100014161	SKIV2L	100	89.022	Heterocephalus_glaber_male
ENSBTAG00000005587	SKIV2L	98	59.886	ENSHCOG00000007191	skiv2l	100	59.805	Hippocampus_comes
ENSBTAG00000005587	SKIV2L	99	59.242	ENSIPUG00000016263	skiv2l	100	59.342	Ictalurus_punctatus
ENSBTAG00000005587	SKIV2L	100	94.783	ENSSTOG00000014596	SKIV2L	100	94.783	Ictidomys_tridecemlineatus
ENSBTAG00000005587	SKIV2L	71	59.712	ENSLACG00000002986	-	73	59.194	Latimeria_chalumnae
ENSBTAG00000005587	SKIV2L	100	93.820	ENSLAFG00000014231	SKIV2L	100	93.820	Loxodonta_africana
ENSBTAG00000005587	SKIV2L	100	94.944	ENSMFAG00000034235	SKIV2L	100	94.944	Macaca_fascicularis
ENSBTAG00000005587	SKIV2L	100	94.864	ENSMMUG00000000736	SKIV2L	100	94.864	Macaca_mulatta
ENSBTAG00000005587	SKIV2L	100	94.864	ENSMNEG00000044474	SKIV2L	100	94.864	Macaca_nemestrina
ENSBTAG00000005587	SKIV2L	100	94.703	ENSMLEG00000030512	SKIV2L	100	94.703	Mandrillus_leucophaeus
ENSBTAG00000005587	SKIV2L	99	60.491	ENSMAMG00000002927	skiv2l	99	60.353	Mastacembelus_armatus
ENSBTAG00000005587	SKIV2L	99	61.252	ENSMZEG00005026415	skiv2l	99	61.205	Maylandia_zebra
ENSBTAG00000005587	SKIV2L	70	51.572	ENSMGAG00000001320	SKIV2L	97	51.572	Meleagris_gallopavo
ENSBTAG00000005587	SKIV2L	100	93.424	ENSMAUG00000018613	Skiv2l	100	93.670	Mesocricetus_auratus
ENSBTAG00000005587	SKIV2L	100	94.543	ENSMICG00000046331	SKIV2L	100	94.543	Microcebus_murinus
ENSBTAG00000005587	SKIV2L	100	91.901	ENSMOCG00000014240	Skiv2l	100	92.061	Microtus_ochrogaster
ENSBTAG00000005587	SKIV2L	99	60.734	ENSMMOG00000014547	skiv2l	98	60.845	Mola_mola
ENSBTAG00000005587	SKIV2L	100	87.910	ENSMODG00000015052	SKIV2L	100	87.910	Monodelphis_domestica
ENSBTAG00000005587	SKIV2L	99	59.742	ENSMALG00000010535	skiv2l	98	59.723	Monopterus_albus
ENSBTAG00000005587	SKIV2L	100	93.424	MGP_CAROLIEiJ_G0021477	Skiv2l	100	93.424	Mus_caroli
ENSBTAG00000005587	SKIV2L	100	93.344	ENSMUSG00000040356	Skiv2l	100	93.344	Mus_musculus
ENSBTAG00000005587	SKIV2L	100	92.863	MGP_PahariEiJ_G0020472	Skiv2l	100	92.863	Mus_pahari
ENSBTAG00000005587	SKIV2L	100	92.943	MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	Mus_spretus
ENSBTAG00000005587	SKIV2L	100	95.345	ENSMPUG00000010567	SKIV2L	100	95.345	Mustela_putorius_furo
ENSBTAG00000005587	SKIV2L	100	94.141	ENSMLUG00000000628	SKIV2L	100	94.141	Myotis_lucifugus
ENSBTAG00000005587	SKIV2L	99	60.734	ENSNBRG00000018650	skiv2l	98	60.757	Neolamprologus_brichardi
ENSBTAG00000005587	SKIV2L	98	91.606	ENSNLEG00000006451	SKIV2L	99	91.687	Nomascus_leucogenys
ENSBTAG00000005587	SKIV2L	78	91.150	ENSMEUG00000006072	SKIV2L	78	91.150	Notamacropus_eugenii
ENSBTAG00000005587	SKIV2L	100	93.660	ENSOPRG00000003972	SKIV2L	100	93.660	Ochotona_princeps
ENSBTAG00000005587	SKIV2L	100	91.974	ENSODEG00000017516	SKIV2L	100	91.974	Octodon_degus
ENSBTAG00000005587	SKIV2L	99	61.833	ENSONIG00000013500	skiv2l	99	62.086	Oreochromis_niloticus
ENSBTAG00000005587	SKIV2L	100	95.024	ENSOCUG00000007019	SKIV2L	100	95.024	Oryctolagus_cuniculus
ENSBTAG00000005587	SKIV2L	99	61.690	ENSORLG00000002021	skiv2l	99	61.779	Oryzias_latipes
ENSBTAG00000005587	SKIV2L	99	61.563	ENSORLG00020009462	skiv2l	99	61.699	Oryzias_latipes_hni
ENSBTAG00000005587	SKIV2L	99	61.374	ENSORLG00015016750	skiv2l	99	61.538	Oryzias_latipes_hsok
ENSBTAG00000005587	SKIV2L	99	61.716	ENSOMEG00000008531	skiv2l	99	61.526	Oryzias_melastigma
ENSBTAG00000005587	SKIV2L	100	94.543	ENSOGAG00000009578	SKIV2L	100	94.543	Otolemur_garnettii
ENSBTAG00000005587	SKIV2L	100	93.109	ENSOARG00000002411	-	100	93.109	Ovis_aries
ENSBTAG00000005587	SKIV2L	98	93.922	ENSPPAG00000040211	SKIV2L	99	93.922	Pan_paniscus
ENSBTAG00000005587	SKIV2L	100	95.746	ENSPPRG00000005017	SKIV2L	100	95.746	Panthera_pardus
ENSBTAG00000005587	SKIV2L	100	95.265	ENSPTIG00000021656	SKIV2L	100	95.265	Panthera_tigris_altaica
ENSBTAG00000005587	SKIV2L	100	94.783	ENSPTRG00000017997	SKIV2L	100	94.783	Pan_troglodytes
ENSBTAG00000005587	SKIV2L	98	93.512	ENSPANG00000011501	SKIV2L	99	93.512	Papio_anubis
ENSBTAG00000005587	SKIV2L	99	59.717	ENSPKIG00000011876	skiv2l	99	60.367	Paramormyrops_kingsleyae
ENSBTAG00000005587	SKIV2L	99	60.000	ENSPMGG00000019707	skiv2l	98	60.390	Periophthalmus_magnuspinnatus
ENSBTAG00000005587	SKIV2L	100	93.905	ENSPEMG00000019001	Skiv2l	100	93.905	Peromyscus_maniculatus_bairdii
ENSBTAG00000005587	SKIV2L	100	87.920	ENSPCIG00000018792	SKIV2L	100	87.920	Phascolarctos_cinereus
ENSBTAG00000005587	SKIV2L	99	61.234	ENSPFOG00000002424	skiv2l	99	61.187	Poecilia_formosa
ENSBTAG00000005587	SKIV2L	99	61.362	ENSPLAG00000018304	skiv2l	99	61.396	Poecilia_latipinna
ENSBTAG00000005587	SKIV2L	99	61.313	ENSPMEG00000006997	skiv2l	99	61.267	Poecilia_mexicana
ENSBTAG00000005587	SKIV2L	99	59.646	ENSPREG00000002277	skiv2l	98	59.951	Poecilia_reticulata
ENSBTAG00000005587	SKIV2L	100	94.061	ENSPPYG00000016472	SKIV2L	100	94.061	Pongo_abelii
ENSBTAG00000005587	SKIV2L	77	93.830	ENSPCAG00000004178	SKIV2L	77	93.830	Procavia_capensis
ENSBTAG00000005587	SKIV2L	100	95.666	ENSPCOG00000010308	SKIV2L	100	95.666	Propithecus_coquereli
ENSBTAG00000005587	SKIV2L	100	93.981	ENSPVAG00000005136	SKIV2L	100	93.981	Pteropus_vampyrus
ENSBTAG00000005587	SKIV2L	99	59.197	ENSPNYG00000017853	skiv2l	97	66.839	Pundamilia_nyererei
ENSBTAG00000005587	SKIV2L	98	60.288	ENSPNAG00000011823	skiv2l	99	60.385	Pygocentrus_nattereri
ENSBTAG00000005587	SKIV2L	100	93.745	ENSRNOG00000000421	Skiv2l	100	93.745	Rattus_norvegicus
ENSBTAG00000005587	SKIV2L	98	92.146	ENSRBIG00000035485	SKIV2L	99	92.146	Rhinopithecus_bieti
ENSBTAG00000005587	SKIV2L	100	94.703	ENSRROG00000036429	SKIV2L	100	94.703	Rhinopithecus_roxellana
ENSBTAG00000005587	SKIV2L	93	37.311	YLR398C	-	93	37.391	Saccharomyces_cerevisiae
ENSBTAG00000005587	SKIV2L	100	94.944	ENSSBOG00000027920	SKIV2L	100	94.944	Saimiri_boliviensis_boliviensis
ENSBTAG00000005587	SKIV2L	100	87.430	ENSSHAG00000008963	SKIV2L	100	86.389	Sarcophilus_harrisii
ENSBTAG00000005587	SKIV2L	99	61.037	ENSSFOG00015016930	skiv2l	99	61.005	Scleropages_formosus
ENSBTAG00000005587	SKIV2L	99	60.734	ENSSMAG00000020185	skiv2l	99	60.594	Scophthalmus_maximus
ENSBTAG00000005587	SKIV2L	99	61.203	ENSSDUG00000019977	skiv2l	99	61.156	Seriola_dumerili
ENSBTAG00000005587	SKIV2L	99	60.097	ENSSLDG00000024382	skiv2l	98	60.163	Seriola_lalandi_dorsalis
ENSBTAG00000005587	SKIV2L	99	62.082	ENSSPUG00000012945	SKIV2L	98	62.006	Sphenodon_punctatus
ENSBTAG00000005587	SKIV2L	94	60.953	ENSSPAG00000012904	skiv2l	98	60.899	Stegastes_partitus
ENSBTAG00000005587	SKIV2L	100	96.067	ENSSSCG00000001424	SKIV2L	100	96.067	Sus_scrofa
ENSBTAG00000005587	SKIV2L	85	54.886	ENSTRUG00000000966	skiv2l	100	55.773	Takifugu_rubripes
ENSBTAG00000005587	SKIV2L	99	59.681	ENSTNIG00000004382	skiv2l	98	59.758	Tetraodon_nigroviridis
ENSBTAG00000005587	SKIV2L	94	93.129	ENSTBEG00000003462	SKIV2L	94	93.129	Tupaia_belangeri
ENSBTAG00000005587	SKIV2L	100	91.011	ENSTTRG00000005931	SKIV2L	100	91.011	Tursiops_truncatus
ENSBTAG00000005587	SKIV2L	100	95.987	ENSUAMG00000024336	SKIV2L	100	95.987	Ursus_americanus
ENSBTAG00000005587	SKIV2L	93	95.955	ENSUMAG00000012666	SKIV2L	100	95.955	Ursus_maritimus
ENSBTAG00000005587	SKIV2L	98	95.355	ENSVVUG00000022807	SKIV2L	98	95.355	Vulpes_vulpes
ENSBTAG00000005587	SKIV2L	100	58.095	ENSXETG00000010932	skiv2l	100	58.366	Xenopus_tropicalis
ENSBTAG00000005587	SKIV2L	99	61.427	ENSXCOG00000019517	skiv2l	96	61.507	Xiphophorus_couchianus
ENSBTAG00000005587	SKIV2L	99	61.124	ENSXMAG00000014079	skiv2l	99	61.075	Xiphophorus_maculatus