EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000005588 (Gene tree)
Gene ID: 508460
Gene Symbol: DXO
Alias: -
Full Name: decapping exoribonuclease
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 5207 bases
Position: chr23:27396902-27402108
Accession: 50147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000055203	RAI1	PF08652.11	7.7e-22	1	1
ENSBTAP00000007340	RAI1	PF08652.11	7.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000064096	-	1197	-	ENSBTAP00000055203	398 (aa)	-	G3N048
ENSBTAT00000007340	-	2148	-	ENSBTAP00000007340	402 (aa)	-	E1BMK0

Gene Model

Click here to download ENSBTAG00000005588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005588	DXO	97	90.231	ENSG00000204348	DXO	98	90.102	Homo_sapiens
ENSBTAG00000005588	DXO	91	54.223	ENSAPOG00000017890	DXO	87	53.333	Acanthochromis_polyacanthus
ENSBTAG00000005588	DXO	100	87.000	ENSAMEG00000002151	DXO	100	86.398	Ailuropoda_melanoleuca
ENSBTAG00000005588	DXO	91	54.223	ENSAOCG00000001719	DXO	87	53.333	Amphiprion_ocellaris
ENSBTAG00000005588	DXO	91	54.496	ENSAPEG00000012237	DXO	87	53.600	Amphiprion_percula
ENSBTAG00000005588	DXO	92	52.957	ENSATEG00000024423	DXO	84	53.117	Anabas_testudineus
ENSBTAG00000005588	DXO	98	60.714	ENSACAG00000012071	DXO	93	61.198	Anolis_carolinensis
ENSBTAG00000005588	DXO	97	91.260	ENSANAG00000020757	DXO	91	91.371	Aotus_nancymaae
ENSBTAG00000005588	DXO	91	55.014	ENSACLG00000027873	DXO	86	55.014	Astatotilapia_calliptera
ENSBTAG00000005588	DXO	90	56.319	ENSAMXG00000032987	DXO	85	57.345	Astyanax_mexicanus
ENSBTAG00000005588	DXO	97	91.260	ENSCJAG00000002246	DXO	98	91.371	Callithrix_jacchus
ENSBTAG00000005588	DXO	90	85.873	ENSCAFG00000000694	DXO	98	86.066	Canis_familiaris
ENSBTAG00000005588	DXO	97	87.404	ENSCAFG00020000953	DXO	98	87.563	Canis_lupus_dingo
ENSBTAG00000005588	DXO	98	96.684	ENSCHIG00000024555	DXO	99	96.684	Capra_hircus
ENSBTAG00000005588	DXO	99	88.471	ENSTSYG00000037337	DXO	95	91.247	Carlito_syrichta
ENSBTAG00000005588	DXO	100	87.688	ENSCPOG00000015108	DXO	96	91.304	Cavia_porcellus
ENSBTAG00000005588	DXO	97	92.031	ENSCCAG00000036575	DXO	98	92.132	Cebus_capucinus
ENSBTAG00000005588	DXO	97	89.717	ENSCATG00000001700	DXO	98	89.848	Cercocebus_atys
ENSBTAG00000005588	DXO	97	86.822	ENSCLAG00000006682	DXO	96	90.435	Chinchilla_lanigera
ENSBTAG00000005588	DXO	97	89.717	ENSCSAG00000009007	DXO	98	89.848	Chlorocebus_sabaeus
ENSBTAG00000005588	DXO	90	63.462	ENSCPBG00000001233	DXO	90	64.972	Chrysemys_picta_bellii
ENSBTAG00000005588	DXO	86	39.946	ENSCING00000000512	-	99	39.946	Ciona_intestinalis
ENSBTAG00000005588	DXO	85	38.398	ENSCSAVG00000009527	-	99	38.398	Ciona_savignyi
ENSBTAG00000005588	DXO	99	89.474	ENSCANG00000039839	DXO	98	89.594	Colobus_angolensis_palliatus
ENSBTAG00000005588	DXO	100	84.788	ENSCGRG00001001718	Dxo	96	92.174	Cricetulus_griseus_chok1gshd
ENSBTAG00000005588	DXO	92	53.261	ENSCSEG00000014295	DXO	86	53.261	Cynoglossus_semilaevis
ENSBTAG00000005588	DXO	92	55.978	ENSCVAG00000019072	DXO	87	55.978	Cyprinodon_variegatus
ENSBTAG00000005588	DXO	100	87.437	ENSDNOG00000038155	DXO	98	88.205	Dasypus_novemcinctus
ENSBTAG00000005588	DXO	100	86.783	ENSDORG00000011708	Dxo	95	89.683	Dipodomys_ordii
ENSBTAG00000005588	DXO	99	83.544	ENSETEG00000009525	DXO	99	83.503	Echinops_telfairi
ENSBTAG00000005588	DXO	91	50.964	ENSEBUG00000003794	DXO	80	52.286	Eptatretus_burgeri
ENSBTAG00000005588	DXO	97	92.031	ENSEASG00005015528	DXO	97	94.118	Equus_asinus_asinus
ENSBTAG00000005588	DXO	97	92.031	ENSECAG00000019694	DXO	97	94.118	Equus_caballus
ENSBTAG00000005588	DXO	77	89.418	ENSEEUG00000005411	DXO	97	89.418	Erinaceus_europaeus
ENSBTAG00000005588	DXO	89	52.778	ENSELUG00000005464	DXO	83	53.279	Esox_lucius
ENSBTAG00000005588	DXO	97	89.460	ENSFCAG00000004520	DXO	98	89.594	Felis_catus
ENSBTAG00000005588	DXO	98	87.817	ENSFDAG00000004264	DXO	98	93.043	Fukomys_damarensis
ENSBTAG00000005588	DXO	91	55.464	ENSFHEG00000014408	DXO	86	55.464	Fundulus_heteroclitus
ENSBTAG00000005588	DXO	88	53.501	ENSGMOG00000008886	DXO	87	53.501	Gadus_morhua
ENSBTAG00000005588	DXO	93	54.813	ENSGAFG00000020264	DXO	88	54.813	Gambusia_affinis
ENSBTAG00000005588	DXO	92	55.376	ENSGACG00000011578	DXO	91	54.945	Gasterosteus_aculeatus
ENSBTAG00000005588	DXO	97	90.488	ENSGGOG00000002277	DXO	98	90.355	Gorilla_gorilla
ENSBTAG00000005588	DXO	91	55.285	ENSHBUG00000012997	DXO	86	55.285	Haplochromis_burtoni
ENSBTAG00000005588	DXO	100	84.250	ENSHGLG00000016585	DOM3Z	95	87.268	Heterocephalus_glaber_female
ENSBTAG00000005588	DXO	100	84.250	ENSHGLG00000016572	DOM3Z	100	87.662	Heterocephalus_glaber_female
ENSBTAG00000005588	DXO	100	84.000	ENSHGLG00100013105	DXO	96	86.957	Heterocephalus_glaber_male
ENSBTAG00000005588	DXO	86	49.713	ENSHCOG00000018381	DXO	95	49.713	Hippocampus_comes
ENSBTAG00000005588	DXO	87	47.851	ENSHCOG00000018327	DXO	88	46.814	Hippocampus_comes
ENSBTAG00000005588	DXO	91	55.313	ENSHCOG00000018279	DXO	88	55.313	Hippocampus_comes
ENSBTAG00000005588	DXO	85	46.471	ENSHCOG00000013410	-	87	46.471	Hippocampus_comes
ENSBTAG00000005588	DXO	90	55.068	ENSIPUG00000002976	dxo	88	55.068	Ictalurus_punctatus
ENSBTAG00000005588	DXO	100	88.000	ENSSTOG00000027075	DXO	96	91.304	Ictidomys_tridecemlineatus
ENSBTAG00000005588	DXO	100	83.166	ENSJJAG00000016118	Dxo	95	85.676	Jaculus_jaculus
ENSBTAG00000005588	DXO	94	54.308	ENSKMAG00000018985	DXO	88	54.667	Kryptolebias_marmoratus
ENSBTAG00000005588	DXO	91	54.324	ENSLBEG00000025439	DXO	86	54.324	Labrus_bergylta
ENSBTAG00000005588	DXO	93	53.034	ENSLACG00000011329	DXO	99	55.525	Latimeria_chalumnae
ENSBTAG00000005588	DXO	92	55.053	ENSLOCG00000008086	DXO	87	55.135	Lepisosteus_oculatus
ENSBTAG00000005588	DXO	100	89.500	ENSLAFG00000014243	DXO	98	89.848	Loxodonta_africana
ENSBTAG00000005588	DXO	97	89.460	ENSMFAG00000042173	DXO	98	89.594	Macaca_fascicularis
ENSBTAG00000005588	DXO	97	89.717	ENSMMUG00000000741	DXO	98	89.848	Macaca_mulatta
ENSBTAG00000005588	DXO	97	89.203	ENSMNEG00000032201	DXO	98	89.340	Macaca_nemestrina
ENSBTAG00000005588	DXO	97	89.717	ENSMLEG00000035257	DXO	98	89.848	Mandrillus_leucophaeus
ENSBTAG00000005588	DXO	91	55.014	ENSMZEG00005003714	DXO	86	55.014	Maylandia_zebra
ENSBTAG00000005588	DXO	97	84.755	ENSMAUG00000022102	Dxo	96	90.435	Mesocricetus_auratus
ENSBTAG00000005588	DXO	97	89.717	ENSMICG00000016605	DXO	98	89.848	Microcebus_murinus
ENSBTAG00000005588	DXO	100	87.186	ENSMOCG00000005928	Dxo	96	92.174	Microtus_ochrogaster
ENSBTAG00000005588	DXO	88	81.638	ENSMODG00000015027	DXO	83	81.638	Monodelphis_domestica
ENSBTAG00000005588	DXO	100	86.432	MGP_CAROLIEiJ_G0021476	Dxo	100	91.525	Mus_caroli
ENSBTAG00000005588	DXO	100	86.181	ENSMUSG00000040482	Dxo	100	92.373	Mus_musculus
ENSBTAG00000005588	DXO	100	86.935	MGP_PahariEiJ_G0020471	Dxo	100	93.220	Mus_pahari
ENSBTAG00000005588	DXO	100	86.683	MGP_SPRETEiJ_G0022381	Dxo	100	92.373	Mus_spretus
ENSBTAG00000005588	DXO	100	85.250	ENSMPUG00000010562	DXO	100	84.383	Mustela_putorius_furo
ENSBTAG00000005588	DXO	97	89.175	ENSMLUG00000027577	DXO	99	89.175	Myotis_lucifugus
ENSBTAG00000005588	DXO	97	85.604	ENSNGAG00000021244	Dxo	96	91.304	Nannospalax_galili
ENSBTAG00000005588	DXO	91	54.743	ENSNBRG00000001675	DXO	86	54.743	Neolamprologus_brichardi
ENSBTAG00000005588	DXO	97	90.488	ENSNLEG00000006470	DXO	98	90.355	Nomascus_leucogenys
ENSBTAG00000005588	DXO	100	79.750	ENSMEUG00000006110	DXO	94	82.322	Notamacropus_eugenii
ENSBTAG00000005588	DXO	97	85.861	ENSODEG00000017552	DXO	96	91.304	Octodon_degus
ENSBTAG00000005588	DXO	94	53.806	ENSONIG00000017143	DXO	90	54.743	Oreochromis_niloticus
ENSBTAG00000005588	DXO	97	87.404	ENSOCUG00000007029	DXO	98	87.563	Oryctolagus_cuniculus
ENSBTAG00000005588	DXO	93	53.083	ENSORLG00000008743	DXO	85	55.249	Oryzias_latipes
ENSBTAG00000005588	DXO	91	53.406	ENSORLG00020018952	DXO	85	54.972	Oryzias_latipes_hni
ENSBTAG00000005588	DXO	93	53.083	ENSORLG00015008419	DXO	86	53.533	Oryzias_latipes_hsok
ENSBTAG00000005588	DXO	91	55.435	ENSOMEG00000011105	DXO	85	56.546	Oryzias_melastigma
ENSBTAG00000005588	DXO	94	91.777	ENSOGAG00000009590	DXO	98	89.086	Otolemur_garnettii
ENSBTAG00000005588	DXO	86	97.695	ENSOARG00000002332	DXO	84	97.695	Ovis_aries
ENSBTAG00000005588	DXO	97	90.488	ENSPPAG00000041236	DXO	98	90.355	Pan_paniscus
ENSBTAG00000005588	DXO	97	89.717	ENSPPRG00000005199	DXO	98	89.594	Panthera_pardus
ENSBTAG00000005588	DXO	97	89.460	ENSPTIG00000021529	DXO	98	89.340	Panthera_tigris_altaica
ENSBTAG00000005588	DXO	97	90.746	ENSPTRG00000045498	-	98	90.609	Pan_troglodytes
ENSBTAG00000005588	DXO	97	90.488	ENSPTRG00000052503	-	98	90.355	Pan_troglodytes
ENSBTAG00000005588	DXO	97	89.717	ENSPANG00000017587	DXO	98	89.848	Papio_anubis
ENSBTAG00000005588	DXO	88	53.390	ENSPMGG00000022188	DXO	81	53.143	Periophthalmus_magnuspinnatus
ENSBTAG00000005588	DXO	100	85.930	ENSPEMG00000009229	Dxo	95	92.105	Peromyscus_maniculatus_bairdii
ENSBTAG00000005588	DXO	88	54.902	ENSPMAG00000008156	DXO	98	54.830	Petromyzon_marinus
ENSBTAG00000005588	DXO	100	78.856	ENSPCIG00000018793	DXO	95	82.058	Phascolarctos_cinereus
ENSBTAG00000005588	DXO	93	54.813	ENSPFOG00000004778	DXO	88	54.813	Poecilia_formosa
ENSBTAG00000005588	DXO	93	54.813	ENSPLAG00000015246	DXO	88	54.813	Poecilia_latipinna
ENSBTAG00000005588	DXO	93	54.813	ENSPMEG00000001371	DXO	88	54.813	Poecilia_mexicana
ENSBTAG00000005588	DXO	97	90.746	ENSPPYG00000016473	DXO	98	90.609	Pongo_abelii
ENSBTAG00000005588	DXO	97	87.565	ENSPCAG00000004354	DXO	98	87.563	Procavia_capensis
ENSBTAG00000005588	DXO	99	90.476	ENSPCOG00000016641	DXO	98	90.863	Propithecus_coquereli
ENSBTAG00000005588	DXO	100	89.000	ENSPVAG00000005137	DXO	95	92.308	Pteropus_vampyrus
ENSBTAG00000005588	DXO	91	54.472	ENSPNYG00000018482	DXO	86	54.472	Pundamilia_nyererei
ENSBTAG00000005588	DXO	90	55.525	ENSPNAG00000016499	DXO	86	55.525	Pygocentrus_nattereri
ENSBTAG00000005588	DXO	100	86.935	ENSRNOG00000000422	Dxo	100	86.146	Rattus_norvegicus
ENSBTAG00000005588	DXO	97	89.717	ENSRBIG00000044693	DXO	98	89.848	Rhinopithecus_bieti
ENSBTAG00000005588	DXO	97	89.974	ENSRROG00000035555	DXO	98	90.102	Rhinopithecus_roxellana
ENSBTAG00000005588	DXO	97	91.517	ENSSBOG00000035395	DXO	98	91.624	Saimiri_boliviensis_boliviensis
ENSBTAG00000005588	DXO	99	78.589	ENSSHAG00000009052	DXO	99	78.788	Sarcophilus_harrisii
ENSBTAG00000005588	DXO	88	55.462	ENSSFOG00015003736	dxo	85	56.056	Scleropages_formosus
ENSBTAG00000005588	DXO	93	54.155	ENSSMAG00000015443	DXO	87	54.155	Scophthalmus_maximus
ENSBTAG00000005588	DXO	94	52.128	ENSSDUG00000009756	DXO	88	54.624	Seriola_dumerili
ENSBTAG00000005588	DXO	93	51.330	ENSSLDG00000022817	DXO	83	53.333	Seriola_lalandi_dorsalis
ENSBTAG00000005588	DXO	64	64.407	ENSSPUG00000012861	DXO	76	65.089	Sphenodon_punctatus
ENSBTAG00000005588	DXO	93	52.000	ENSSPAG00000009427	DXO	89	52.344	Stegastes_partitus
ENSBTAG00000005588	DXO	97	92.765	ENSSSCG00000001425	DXO	96	94.611	Sus_scrofa
ENSBTAG00000005588	DXO	91	53.134	ENSTRUG00000021219	DXO	89	53.134	Takifugu_rubripes
ENSBTAG00000005588	DXO	91	48.361	ENSTNIG00000000151	-	97	48.753	Tetraodon_nigroviridis
ENSBTAG00000005588	DXO	100	81.000	ENSTTRG00000005937	DXO	95	83.289	Tursiops_truncatus
ENSBTAG00000005588	DXO	100	83.000	ENSUAMG00000024335	DXO	100	82.116	Ursus_americanus
ENSBTAG00000005588	DXO	100	87.250	ENSUMAG00000012641	DXO	96	93.913	Ursus_maritimus
ENSBTAG00000005588	DXO	50	92.079	ENSVPAG00000000292	-	99	96.447	Vicugna_pacos
ENSBTAG00000005588	DXO	97	87.404	ENSVVUG00000023270	DXO	96	93.043	Vulpes_vulpes
ENSBTAG00000005588	DXO	96	52.577	ENSXETG00000027585	dxo	99	52.577	Xenopus_tropicalis
ENSBTAG00000005588	DXO	93	54.011	ENSXMAG00000001092	DXO	88	54.011	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	-	ISS	Function
GO:0003729	mRNA binding	-	ISS	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006402	mRNA catabolic process	-	ISS	Process
GO:0008409	5'-3' exonuclease activity	-	ISS	Function
GO:0034353	RNA pyrophosphohydrolase activity	-	ISS	Function
GO:0050779	RNA destabilization	-	ISS	Process
GO:0071028	nuclear mRNA surveillance	-	ISS	Process
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	ISS	Process