EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000005631 (Gene tree)
Gene ID: 505556
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 12246 bases
Position: chr23:27533912-27546157
Accession: 36765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000007404	tRNA-synt_1g	PF09334.11	5.5e-11	1	1
ENSBTAP00000007404	Anticodon_1	PF08264.13	1.6e-32	1	1
ENSBTAP00000007404	tRNA-synt_1	PF00133.22	2.3e-203	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000007404	-	4627	XM_024984083	ENSBTAP00000007404	1264 (aa)	XP_024839851	E1BLV6

Gene Model

Click here to download ENSBTAG00000005631's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000005631	VARS	81	50.627	ENSBTAG00000010698	VARS2	91	52.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005631	VARS	100	95.016	ENSG00000204394	VARS	100	96.552	Homo_sapiens
ENSBTAG00000005631	VARS	98	64.876	ENSAPOG00000020691	vars	99	64.715	Acanthochromis_polyacanthus
ENSBTAG00000005631	VARS	98	64.876	ENSAPOG00000020921	vars	99	64.715	Acanthochromis_polyacanthus
ENSBTAG00000005631	VARS	100	95.257	ENSAMEG00000006417	VARS	100	95.257	Ailuropoda_melanoleuca
ENSBTAG00000005631	VARS	100	65.961	ENSACIG00000013752	vars	100	65.723	Amphilophus_citrinellus
ENSBTAG00000005631	VARS	100	64.934	ENSAOCG00000002447	vars	100	64.516	Amphiprion_ocellaris
ENSBTAG00000005631	VARS	100	64.779	ENSAPEG00000010638	vars	99	64.798	Amphiprion_percula
ENSBTAG00000005631	VARS	100	63.922	ENSATEG00000020219	vars	100	64.539	Anabas_testudineus
ENSBTAG00000005631	VARS	90	70.859	ENSACAG00000029133	-	99	70.685	Anolis_carolinensis
ENSBTAG00000005631	VARS	100	94.937	ENSANAG00000015453	VARS	100	94.937	Aotus_nancymaae
ENSBTAG00000005631	VARS	100	65.194	ENSACLG00000025699	vars	97	64.957	Astatotilapia_calliptera
ENSBTAG00000005631	VARS	94	66.722	ENSAMXG00000017716	vars	95	66.722	Astyanax_mexicanus
ENSBTAG00000005631	VARS	100	94.858	ENSCJAG00000002604	VARS	100	94.858	Callithrix_jacchus
ENSBTAG00000005631	VARS	100	94.541	ENSCAFG00000000636	VARS	100	94.541	Canis_familiaris
ENSBTAG00000005631	VARS	94	94.764	ENSCAFG00020020790	VARS	96	94.764	Canis_lupus_dingo
ENSBTAG00000005631	VARS	100	99.209	ENSCHIG00000011008	VARS	100	99.209	Capra_hircus
ENSBTAG00000005631	VARS	100	95.332	ENSTSYG00000001567	VARS	100	95.332	Carlito_syrichta
ENSBTAG00000005631	VARS	91	90.744	ENSCAPG00000013736	VARS	99	90.744	Cavia_aperea
ENSBTAG00000005631	VARS	100	91.772	ENSCPOG00000000870	VARS	100	91.772	Cavia_porcellus
ENSBTAG00000005631	VARS	100	94.858	ENSCCAG00000035656	VARS	100	94.858	Cebus_capucinus
ENSBTAG00000005631	VARS	100	94.858	ENSCATG00000022394	VARS	100	94.858	Cercocebus_atys
ENSBTAG00000005631	VARS	88	89.501	ENSCLAG00000009470	VARS	91	89.655	Chinchilla_lanigera
ENSBTAG00000005631	VARS	100	94.858	ENSCSAG00000008784	VARS	100	94.858	Chlorocebus_sabaeus
ENSBTAG00000005631	VARS	77	74.025	ENSCPBG00000007943	VARS	96	74.025	Chrysemys_picta_bellii
ENSBTAG00000005631	VARS	100	94.778	ENSCANG00000033570	VARS	100	94.778	Colobus_angolensis_palliatus
ENSBTAG00000005631	VARS	100	92.484	ENSCGRG00001005686	Vars	100	92.484	Cricetulus_griseus_chok1gshd
ENSBTAG00000005631	VARS	92	87.521	ENSCGRG00000013352	Vars	78	87.521	Cricetulus_griseus_crigri
ENSBTAG00000005631	VARS	100	64.664	ENSCSEG00000019652	vars	100	64.506	Cynoglossus_semilaevis
ENSBTAG00000005631	VARS	100	65.579	ENSCVAG00000022398	vars	100	65.579	Cyprinodon_variegatus
ENSBTAG00000005631	VARS	100	64.624	ENSDARG00000044575	vars	100	64.619	Danio_rerio
ENSBTAG00000005631	VARS	84	92.568	ENSDORG00000016433	Vars	95	92.568	Dipodomys_ordii
ENSBTAG00000005631	VARS	69	86.076	ENSETEG00000003824	VARS	76	86.076	Echinops_telfairi
ENSBTAG00000005631	VARS	50	70.417	ENSEBUG00000007086	vars	84	69.459	Eptatretus_burgeri
ENSBTAG00000005631	VARS	57	62.225	ENSEBUG00000004637	vars	100	62.500	Eptatretus_burgeri
ENSBTAG00000005631	VARS	100	96.519	ENSEASG00005015673	VARS	100	96.519	Equus_asinus_asinus
ENSBTAG00000005631	VARS	100	96.364	ENSECAG00000014620	VARS	100	96.364	Equus_caballus
ENSBTAG00000005631	VARS	83	92.388	ENSEEUG00000004116	VARS	83	92.388	Erinaceus_europaeus
ENSBTAG00000005631	VARS	100	64.551	ENSELUG00000006550	vars	97	64.783	Esox_lucius
ENSBTAG00000005631	VARS	100	95.886	ENSFCAG00000004510	VARS	100	95.886	Felis_catus
ENSBTAG00000005631	VARS	82	92.062	ENSFDAG00000011401	VARS	100	92.062	Fukomys_damarensis
ENSBTAG00000005631	VARS	100	65.346	ENSFHEG00000010672	vars	100	65.423	Fundulus_heteroclitus
ENSBTAG00000005631	VARS	92	66.223	ENSGMOG00000014908	vars	97	66.223	Gadus_morhua
ENSBTAG00000005631	VARS	100	65.759	ENSGAFG00000021630	vars	100	65.759	Gambusia_affinis
ENSBTAG00000005631	VARS	92	66.165	ENSGACG00000009601	vars	98	65.833	Gasterosteus_aculeatus
ENSBTAG00000005631	VARS	50	64.771	ENSGAGG00000006508	-	91	64.297	Gopherus_agassizii
ENSBTAG00000005631	VARS	100	95.016	ENSGGOG00000011364	VARS	100	95.016	Gorilla_gorilla
ENSBTAG00000005631	VARS	100	65.194	ENSHBUG00000017151	vars	97	64.957	Haplochromis_burtoni
ENSBTAG00000005631	VARS	100	90.506	ENSHGLG00000011646	VARS	100	90.190	Heterocephalus_glaber_female
ENSBTAG00000005631	VARS	93	83.056	ENSHGLG00100018062	VARS	100	82.973	Heterocephalus_glaber_male
ENSBTAG00000005631	VARS	99	64.729	ENSHCOG00000012198	vars	99	64.669	Hippocampus_comes
ENSBTAG00000005631	VARS	100	65.525	ENSIPUG00000005218	vars	100	65.525	Ictalurus_punctatus
ENSBTAG00000005631	VARS	100	94.625	ENSSTOG00000013112	VARS	100	94.625	Ictidomys_tridecemlineatus
ENSBTAG00000005631	VARS	100	91.535	ENSJJAG00000019749	-	100	90.902	Jaculus_jaculus
ENSBTAG00000005631	VARS	100	72.231	ENSJJAG00000015343	-	99	73.414	Jaculus_jaculus
ENSBTAG00000005631	VARS	100	65.008	ENSKMAG00000009455	vars	100	64.613	Kryptolebias_marmoratus
ENSBTAG00000005631	VARS	100	63.880	ENSLBEG00000010341	vars	100	64.427	Labrus_bergylta
ENSBTAG00000005631	VARS	94	61.956	ENSLACG00000015232	VARS	99	62.531	Latimeria_chalumnae
ENSBTAG00000005631	VARS	100	66.562	ENSLOCG00000004240	vars	100	66.328	Lepisosteus_oculatus
ENSBTAG00000005631	VARS	100	93.987	ENSLAFG00000023090	VARS	100	93.513	Loxodonta_africana
ENSBTAG00000005631	VARS	100	94.858	ENSMFAG00000001032	VARS	100	94.858	Macaca_fascicularis
ENSBTAG00000005631	VARS	100	94.858	ENSMMUG00000006828	VARS	100	94.858	Macaca_mulatta
ENSBTAG00000005631	VARS	100	94.858	ENSMNEG00000042072	VARS	100	94.858	Macaca_nemestrina
ENSBTAG00000005631	VARS	100	95.016	ENSMLEG00000039307	VARS	100	95.016	Mandrillus_leucophaeus
ENSBTAG00000005631	VARS	100	64.491	ENSMAMG00000003949	vars	100	64.353	Mastacembelus_armatus
ENSBTAG00000005631	VARS	100	65.194	ENSMZEG00005018327	vars	100	64.799	Maylandia_zebra
ENSBTAG00000005631	VARS	100	92.247	ENSMAUG00000006715	Vars	100	92.247	Mesocricetus_auratus
ENSBTAG00000005631	VARS	100	94.462	ENSMICG00000003548	VARS	100	94.462	Microcebus_murinus
ENSBTAG00000005631	VARS	100	89.794	ENSMOCG00000015404	Vars	100	89.636	Microtus_ochrogaster
ENSBTAG00000005631	VARS	100	64.701	ENSMMOG00000015801	vars	100	64.623	Mola_mola
ENSBTAG00000005631	VARS	100	86.788	ENSMODG00000015204	-	100	86.788	Monodelphis_domestica
ENSBTAG00000005631	VARS	99	64.679	ENSMALG00000022532	vars	99	64.441	Monopterus_albus
ENSBTAG00000005631	VARS	100	93.038	MGP_CAROLIEiJ_G0021491	Vars	100	92.563	Mus_caroli
ENSBTAG00000005631	VARS	100	92.880	ENSMUSG00000007029	Vars	100	92.405	Mus_musculus
ENSBTAG00000005631	VARS	100	92.642	MGP_PahariEiJ_G0020486	Vars	100	92.247	Mus_pahari
ENSBTAG00000005631	VARS	100	92.959	MGP_SPRETEiJ_G0022396	Vars	100	92.484	Mus_spretus
ENSBTAG00000005631	VARS	100	95.411	ENSMPUG00000010821	VARS	100	95.411	Mustela_putorius_furo
ENSBTAG00000005631	VARS	78	93.320	ENSMLUG00000013126	VARS	100	93.927	Myotis_lucifugus
ENSBTAG00000005631	VARS	100	92.405	ENSNGAG00000012151	Vars	100	92.722	Nannospalax_galili
ENSBTAG00000005631	VARS	100	64.961	ENSNBRG00000020520	vars	100	64.724	Neolamprologus_brichardi
ENSBTAG00000005631	VARS	100	94.383	ENSNLEG00000006351	VARS	100	94.383	Nomascus_leucogenys
ENSBTAG00000005631	VARS	100	83.149	ENSMEUG00000011378	VARS	100	83.149	Notamacropus_eugenii
ENSBTAG00000005631	VARS	100	93.513	ENSOPRG00000003607	VARS	100	93.513	Ochotona_princeps
ENSBTAG00000005631	VARS	100	91.060	ENSODEG00000017681	VARS	100	90.506	Octodon_degus
ENSBTAG00000005631	VARS	100	65.676	ENSONIG00000013064	vars	99	68.297	Oreochromis_niloticus
ENSBTAG00000005631	VARS	77	79.191	ENSOANG00000005400	VARS	98	78.359	Ornithorhynchus_anatinus
ENSBTAG00000005631	VARS	100	91.311	ENSOCUG00000022463	VARS	100	91.469	Oryctolagus_cuniculus
ENSBTAG00000005631	VARS	100	64.873	ENSORLG00000013063	vars	100	64.969	Oryzias_latipes
ENSBTAG00000005631	VARS	100	65.349	ENSORLG00020003504	vars	100	65.426	Oryzias_latipes_hni
ENSBTAG00000005631	VARS	100	65.400	ENSORLG00015009001	vars	100	65.400	Oryzias_latipes_hsok
ENSBTAG00000005631	VARS	100	65.167	ENSOMEG00000015016	vars	100	65.167	Oryzias_melastigma
ENSBTAG00000005631	VARS	100	93.987	ENSOGAG00000007515	VARS	100	93.987	Otolemur_garnettii
ENSBTAG00000005631	VARS	100	95.253	ENSPPAG00000034012	VARS	100	95.253	Pan_paniscus
ENSBTAG00000005631	VARS	100	95.965	ENSPPRG00000014855	VARS	100	95.965	Panthera_pardus
ENSBTAG00000005631	VARS	85	96.283	ENSPTIG00000010462	VARS	95	96.245	Panthera_tigris_altaica
ENSBTAG00000005631	VARS	100	95.174	ENSPTRG00000017985	VARS	100	95.174	Pan_troglodytes
ENSBTAG00000005631	VARS	100	93.218	ENSPANG00000014565	VARS	100	93.218	Papio_anubis
ENSBTAG00000005631	VARS	100	63.784	ENSPKIG00000016304	vars	100	63.784	Paramormyrops_kingsleyae
ENSBTAG00000005631	VARS	100	66.246	ENSPMGG00000023909	vars	100	66.088	Periophthalmus_magnuspinnatus
ENSBTAG00000005631	VARS	100	93.671	ENSPEMG00000006639	Vars	100	93.671	Peromyscus_maniculatus_bairdii
ENSBTAG00000005631	VARS	100	86.313	ENSPCIG00000018553	VARS	100	86.313	Phascolarctos_cinereus
ENSBTAG00000005631	VARS	100	65.992	ENSPFOG00000015690	vars	100	65.992	Poecilia_formosa
ENSBTAG00000005631	VARS	100	66.640	ENSPLAG00000009590	vars	100	66.326	Poecilia_latipinna
ENSBTAG00000005631	VARS	100	65.992	ENSPMEG00000004708	vars	100	65.992	Poecilia_mexicana
ENSBTAG00000005631	VARS	100	64.094	ENSPREG00000013264	vars	100	63.843	Poecilia_reticulata
ENSBTAG00000005631	VARS	100	93.196	ENSPPYG00000016460	VARS	100	93.196	Pongo_abelii
ENSBTAG00000005631	VARS	86	92.460	ENSPCAG00000013565	VARS	86	92.460	Procavia_capensis
ENSBTAG00000005631	VARS	100	94.704	ENSPCOG00000010942	VARS	100	95.178	Propithecus_coquereli
ENSBTAG00000005631	VARS	100	91.693	ENSPVAG00000012403	VARS	100	91.693	Pteropus_vampyrus
ENSBTAG00000005631	VARS	100	65.194	ENSPNYG00000022511	vars	100	64.957	Pundamilia_nyererei
ENSBTAG00000005631	VARS	100	65.477	ENSPNAG00000020962	vars	100	65.167	Pygocentrus_nattereri
ENSBTAG00000005631	VARS	100	93.829	ENSRNOG00000000867	Vars	100	93.829	Rattus_norvegicus
ENSBTAG00000005631	VARS	100	94.937	ENSRBIG00000041669	VARS	100	94.937	Rhinopithecus_bieti
ENSBTAG00000005631	VARS	100	94.937	ENSRROG00000045490	VARS	100	94.937	Rhinopithecus_roxellana
ENSBTAG00000005631	VARS	100	94.937	ENSSBOG00000035402	VARS	100	94.937	Saimiri_boliviensis_boliviensis
ENSBTAG00000005631	VARS	100	82.090	ENSSHAG00000006937	VARS	100	82.325	Sarcophilus_harrisii
ENSBTAG00000005631	VARS	100	64.788	ENSSFOG00015014272	vars	100	64.633	Scleropages_formosus
ENSBTAG00000005631	VARS	100	64.087	ENSSMAG00000009596	vars	99	63.926	Scophthalmus_maximus
ENSBTAG00000005631	VARS	100	64.938	ENSSDUG00000014177	vars	100	64.856	Seriola_dumerili
ENSBTAG00000005631	VARS	100	64.783	ENSSLDG00000025316	vars	100	64.701	Seriola_lalandi_dorsalis
ENSBTAG00000005631	VARS	100	64.929	ENSSPAG00000017068	vars	100	64.875	Stegastes_partitus
ENSBTAG00000005631	VARS	100	96.126	ENSSSCG00000038950	VARS	100	96.126	Sus_scrofa
ENSBTAG00000005631	VARS	82	64.430	ENSTRUG00000012307	vars	98	64.374	Takifugu_rubripes
ENSBTAG00000005631	VARS	100	64.973	ENSTNIG00000008011	vars	100	64.812	Tetraodon_nigroviridis
ENSBTAG00000005631	VARS	54	97.753	ENSTBEG00000004728	-	60	97.753	Tupaia_belangeri
ENSBTAG00000005631	VARS	100	88.291	ENSTTRG00000014128	VARS	100	88.291	Tursiops_truncatus
ENSBTAG00000005631	VARS	100	91.352	ENSUAMG00000010424	VARS	100	91.352	Ursus_americanus
ENSBTAG00000005631	VARS	93	95.714	ENSUMAG00000013486	VARS	98	95.238	Ursus_maritimus
ENSBTAG00000005631	VARS	100	94.308	ENSVVUG00000021323	VARS	100	94.071	Vulpes_vulpes
ENSBTAG00000005631	VARS	96	63.298	ENSXETG00000024076	vars	98	62.540	Xenopus_tropicalis
ENSBTAG00000005631	VARS	100	65.669	ENSXCOG00000019172	vars	100	65.827	Xiphophorus_couchianus
ENSBTAG00000005631	VARS	100	65.681	ENSXMAG00000010927	vars	100	65.681	Xiphophorus_maculatus