EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000005733 (Gene tree)
Gene ID: 524776
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 201438 bases
Position: chr13:70030863-70232300
Accession: 27281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000053689	ResIII	PF04851.15	1.9e-07	1	1
ENSBTAP00000062615	ResIII	PF04851.15	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSBTAG00000005733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005733's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000005733	CHD6	56	63.630	ENSBTAG00000020422	CHD8	66	63.564
ENSBTAG00000005733	CHD6	76	64.005	ENSBTAG00000002287	CHD9	68	65.965
ENSBTAG00000005733	CHD6	73	68.429	ENSBTAG00000021841	CHD7	76	65.334

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005733	CHD6	100	88.436	ENSG00000124177	CHD6	99	100.000	Homo_sapiens
ENSBTAG00000005733	CHD6	76	74.198	ENSAPOG00000013736	chd6	66	74.198	Acanthochromis_polyacanthus
ENSBTAG00000005733	CHD6	100	89.783	ENSAMEG00000009496	CHD6	100	89.783	Ailuropoda_melanoleuca
ENSBTAG00000005733	CHD6	72	75.729	ENSATEG00000005608	chd6	64	75.618	Anabas_testudineus
ENSBTAG00000005733	CHD6	99	71.355	ENSAPLG00000015592	CHD6	99	72.010	Anas_platyrhynchos
ENSBTAG00000005733	CHD6	99	66.423	ENSACAG00000006842	CHD6	91	75.557	Anolis_carolinensis
ENSBTAG00000005733	CHD6	100	88.032	ENSANAG00000037548	CHD6	99	93.211	Aotus_nancymaae
ENSBTAG00000005733	CHD6	81	73.145	ENSAMXG00000009576	chd6	81	69.976	Astyanax_mexicanus
ENSBTAG00000005733	CHD6	100	88.032	ENSCJAG00000017920	CHD6	99	93.028	Callithrix_jacchus
ENSBTAG00000005733	CHD6	100	89.342	ENSCAFG00000009236	CHD6	100	89.636	Canis_familiaris
ENSBTAG00000005733	CHD6	99	88.782	ENSCAFG00020012906	CHD6	99	96.194	Canis_lupus_dingo
ENSBTAG00000005733	CHD6	100	97.648	ENSCHIG00000017606	CHD6	100	97.648	Capra_hircus
ENSBTAG00000005733	CHD6	84	87.396	ENSTSYG00000014635	CHD6	100	87.396	Carlito_syrichta
ENSBTAG00000005733	CHD6	100	87.546	ENSCPOG00000015641	CHD6	100	87.546	Cavia_porcellus
ENSBTAG00000005733	CHD6	100	88.142	ENSCCAG00000036828	CHD6	99	93.211	Cebus_capucinus
ENSBTAG00000005733	CHD6	100	88.032	ENSCATG00000039248	CHD6	99	93.211	Cercocebus_atys
ENSBTAG00000005733	CHD6	100	87.170	ENSCLAG00000013743	CHD6	100	87.170	Chinchilla_lanigera
ENSBTAG00000005733	CHD6	100	88.326	ENSCSAG00000013997	CHD6	100	88.326	Chlorocebus_sabaeus
ENSBTAG00000005733	CHD6	91	88.603	ENSCHOG00000012647	CHD6	95	88.603	Choloepus_hoffmanni
ENSBTAG00000005733	CHD6	91	82.337	ENSCPBG00000019382	CHD6	99	73.309	Chrysemys_picta_bellii
ENSBTAG00000005733	CHD6	100	88.326	ENSCANG00000043435	CHD6	99	93.211	Colobus_angolensis_palliatus
ENSBTAG00000005733	CHD6	100	85.893	ENSCGRG00001002694	Chd6	100	85.783	Cricetulus_griseus_chok1gshd
ENSBTAG00000005733	CHD6	85	73.286	ENSDARG00000017244	chd6	80	73.286	Danio_rerio
ENSBTAG00000005733	CHD6	99	86.694	ENSDNOG00000004176	CHD6	99	86.694	Dasypus_novemcinctus
ENSBTAG00000005733	CHD6	99	89.303	ENSEASG00005023433	CHD6	95	97.876	Equus_asinus_asinus
ENSBTAG00000005733	CHD6	99	89.890	ENSECAG00000011761	CHD6	100	89.890	Equus_caballus
ENSBTAG00000005733	CHD6	65	79.015	ENSELUG00000012309	chd6	90	79.015	Esox_lucius
ENSBTAG00000005733	CHD6	100	89.563	ENSFCAG00000003572	CHD6	100	89.563	Felis_catus
ENSBTAG00000005733	CHD6	99	70.790	ENSFALG00000012563	CHD6	98	71.006	Ficedula_albicollis
ENSBTAG00000005733	CHD6	99	87.357	ENSFDAG00000013791	CHD6	99	87.357	Fukomys_damarensis
ENSBTAG00000005733	CHD6	71	69.550	ENSGMOG00000011715	chd6	85	70.523	Gadus_morhua
ENSBTAG00000005733	CHD6	78	71.504	ENSGACG00000000037	chd6	87	70.976	Gasterosteus_aculeatus
ENSBTAG00000005733	CHD6	100	88.436	ENSGGOG00000013123	CHD6	99	93.211	Gorilla_gorilla
ENSBTAG00000005733	CHD6	77	71.341	ENSHBUG00000014701	chd6	64	75.100	Haplochromis_burtoni
ENSBTAG00000005733	CHD6	100	87.073	ENSHGLG00000004548	CHD6	100	87.073	Heterocephalus_glaber_female
ENSBTAG00000005733	CHD6	100	87.073	ENSHGLG00100006401	CHD6	100	87.073	Heterocephalus_glaber_male
ENSBTAG00000005733	CHD6	79	77.270	ENSIPUG00000003692	chd6	80	71.267	Ictalurus_punctatus
ENSBTAG00000005733	CHD6	100	88.097	ENSSTOG00000013382	CHD6	100	88.097	Ictidomys_tridecemlineatus
ENSBTAG00000005733	CHD6	90	73.833	ENSLACG00000010881	CHD6	92	73.658	Latimeria_chalumnae
ENSBTAG00000005733	CHD6	73	80.164	ENSLOCG00000007386	chd6	85	75.483	Lepisosteus_oculatus
ENSBTAG00000005733	CHD6	100	88.101	ENSLAFG00000012144	CHD6	100	88.101	Loxodonta_africana
ENSBTAG00000005733	CHD6	100	88.399	ENSMFAG00000032830	CHD6	99	93.211	Macaca_fascicularis
ENSBTAG00000005733	CHD6	100	88.399	ENSMMUG00000020458	CHD6	99	93.211	Macaca_mulatta
ENSBTAG00000005733	CHD6	100	88.399	ENSMNEG00000040847	CHD6	99	93.211	Macaca_nemestrina
ENSBTAG00000005733	CHD6	100	88.004	ENSMLEG00000031965	CHD6	99	93.211	Mandrillus_leucophaeus
ENSBTAG00000005733	CHD6	75	73.148	ENSMAMG00000013111	chd6	64	75.602	Mastacembelus_armatus
ENSBTAG00000005733	CHD6	99	70.914	ENSMGAG00000001121	CHD6	93	80.056	Meleagris_gallopavo
ENSBTAG00000005733	CHD6	100	87.884	ENSMICG00000016641	CHD6	99	92.477	Microcebus_murinus
ENSBTAG00000005733	CHD6	89	78.910	ENSMODG00000000720	-	99	78.828	Monodelphis_domestica
ENSBTAG00000005733	CHD6	100	84.607	MGP_CAROLIEiJ_G0024604	Chd6	100	92.911	Mus_caroli
ENSBTAG00000005733	CHD6	100	84.717	ENSMUSG00000057133	Chd6	100	92.827	Mus_musculus
ENSBTAG00000005733	CHD6	100	84.644	MGP_PahariEiJ_G0026048	Chd6	100	93.165	Mus_pahari
ENSBTAG00000005733	CHD6	100	84.717	MGP_SPRETEiJ_G0025526	Chd6	100	92.911	Mus_spretus
ENSBTAG00000005733	CHD6	100	88.302	ENSMPUG00000017695	CHD6	100	88.302	Mustela_putorius_furo
ENSBTAG00000005733	CHD6	100	89.089	ENSMLUG00000016247	CHD6	100	89.089	Myotis_lucifugus
ENSBTAG00000005733	CHD6	75	73.386	ENSNBRG00000013839	chd6	79	73.581	Neolamprologus_brichardi
ENSBTAG00000005733	CHD6	100	86.647	ENSNLEG00000006496	CHD6	100	86.610	Nomascus_leucogenys
ENSBTAG00000005733	CHD6	100	84.423	ENSOPRG00000013376	-	100	84.423	Ochotona_princeps
ENSBTAG00000005733	CHD6	82	75.599	ENSONIG00000000393	chd6	85	75.663	Oreochromis_niloticus
ENSBTAG00000005733	CHD6	100	69.607	ENSOANG00000014347	CHD6	99	69.427	Ornithorhynchus_anatinus
ENSBTAG00000005733	CHD6	99	86.544	ENSOCUG00000012394	CHD6	100	86.544	Oryctolagus_cuniculus
ENSBTAG00000005733	CHD6	77	71.171	ENSORLG00020021891	chd6	95	86.172	Oryzias_latipes_hni
ENSBTAG00000005733	CHD6	99	87.214	ENSOGAG00000002427	CHD6	99	87.164	Otolemur_garnettii
ENSBTAG00000005733	CHD6	99	95.000	ENSOARG00000002597	CHD6	100	95.000	Ovis_aries
ENSBTAG00000005733	CHD6	100	89.636	ENSPPRG00000014756	CHD6	100	89.636	Panthera_pardus
ENSBTAG00000005733	CHD6	100	89.526	ENSPTIG00000011094	CHD6	100	89.526	Panthera_tigris_altaica
ENSBTAG00000005733	CHD6	100	88.473	ENSPTRG00000013504	CHD6	99	93.211	Pan_troglodytes
ENSBTAG00000005733	CHD6	100	88.326	ENSPANG00000025554	CHD6	99	93.028	Papio_anubis
ENSBTAG00000005733	CHD6	75	78.371	ENSPKIG00000005578	chd6	82	70.711	Paramormyrops_kingsleyae
ENSBTAG00000005733	CHD6	77	76.420	ENSPMGG00000014877	chd6	89	76.458	Periophthalmus_magnuspinnatus
ENSBTAG00000005733	CHD6	100	77.794	ENSPCIG00000028037	CHD6	100	78.234	Phascolarctos_cinereus
ENSBTAG00000005733	CHD6	74	71.766	ENSPLAG00000003128	chd6	79	63.929	Poecilia_latipinna
ENSBTAG00000005733	CHD6	69	74.411	ENSPREG00000022653	chd6	99	86.630	Poecilia_reticulata
ENSBTAG00000005733	CHD6	100	88.587	ENSPPYG00000011016	CHD6	100	88.587	Pongo_abelii
ENSBTAG00000005733	CHD6	100	88.428	ENSPCOG00000001089	CHD6	99	93.028	Propithecus_coquereli
ENSBTAG00000005733	CHD6	77	75.130	ENSPNYG00000022516	chd6	79	75.130	Pundamilia_nyererei
ENSBTAG00000005733	CHD6	80	73.329	ENSPNAG00000012825	chd6	77	73.688	Pygocentrus_nattereri
ENSBTAG00000005733	CHD6	100	84.019	ENSRNOG00000016744	Chd6	100	83.835	Rattus_norvegicus
ENSBTAG00000005733	CHD6	100	88.106	ENSSBOG00000022089	CHD6	99	93.211	Saimiri_boliviensis_boliviensis
ENSBTAG00000005733	CHD6	99	77.439	ENSSHAG00000017072	CHD6	99	77.880	Sarcophilus_harrisii
ENSBTAG00000005733	CHD6	78	75.992	ENSSFOG00015012920	chd6	81	72.860	Scleropages_formosus
ENSBTAG00000005733	CHD6	58	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSBTAG00000005733	CHD6	100	90.886	ENSSSCG00000007360	CHD6	100	91.411	Sus_scrofa
ENSBTAG00000005733	CHD6	97	72.696	ENSTGUG00000003179	CHD6	99	72.924	Taeniopygia_guttata
ENSBTAG00000005733	CHD6	51	77.231	ENSTNIG00000017487	chd6	57	77.231	Tetraodon_nigroviridis
ENSBTAG00000005733	CHD6	100	89.493	ENSTTRG00000013438	CHD6	100	89.493	Tursiops_truncatus
ENSBTAG00000005733	CHD6	100	87.656	ENSUAMG00000024036	CHD6	95	95.946	Ursus_americanus
ENSBTAG00000005733	CHD6	99	89.886	ENSUMAG00000002017	CHD6	95	95.946	Ursus_maritimus
ENSBTAG00000005733	CHD6	92	89.100	ENSVPAG00000007941	CHD6	93	89.117	Vicugna_pacos
ENSBTAG00000005733	CHD6	100	89.599	ENSVVUG00000029164	CHD6	100	89.599	Vulpes_vulpes
ENSBTAG00000005733	CHD6	87	70.971	ENSXETG00000021445	chd6	87	70.998	Xenopus_tropicalis