EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000005825 (Gene tree)
Gene ID: 515343
Gene Symbol: NEIL3
Alias: -
Full Name: Bos taurus nei like DNA glycosylase 3 (NEIL3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 207721 bases
Position: chr27:8413462-8621182
Accession: NM_001034490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000063493	zf-RanBP	PF00641.18	2.8e-07	1	1
ENSBTAP00000007661	zf-RanBP	PF00641.18	2.9e-07	1	1
ENSBTAP00000061910	zf-RanBP	PF00641.18	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000084434	-	2287	-	ENSBTAP00000061910	620 (aa)	-	-
ENSBTAT00000072652	-	1773	-	ENSBTAP00000063493	590 (aa)	-	-
ENSBTAT00000007661	-	2053	-	ENSBTAP00000007661	606 (aa)	-	Q3MHN7

Gene Model

Click here to download ENSBTAG00000005825's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005825	NEIL3	100	78.418	ENSG00000109674	NEIL3	100	78.418	Homo_sapiens
ENSBTAG00000005825	NEIL3	100	50.974	ENSACIG00000002265	neil3	100	50.974	Amphilophus_citrinellus
ENSBTAG00000005825	NEIL3	100	51.057	ENSATEG00000004193	neil3	100	51.057	Anabas_testudineus
ENSBTAG00000005825	NEIL3	100	72.982	ENSANAG00000026464	NEIL3	100	72.982	Aotus_nancymaae
ENSBTAG00000005825	NEIL3	100	51.452	ENSACLG00000011270	neil3	99	53.119	Astatotilapia_calliptera
ENSBTAG00000005825	NEIL3	100	77.100	ENSCJAG00000005464	NEIL3	100	77.100	Callithrix_jacchus
ENSBTAG00000005825	NEIL3	100	94.224	ENSCHIG00000009157	NEIL3	100	94.224	Capra_hircus
ENSBTAG00000005825	NEIL3	100	77.595	ENSTSYG00000014680	NEIL3	100	77.430	Carlito_syrichta
ENSBTAG00000005825	NEIL3	84	78.168	ENSCAPG00000006333	NEIL3	98	78.168	Cavia_aperea
ENSBTAG00000005825	NEIL3	100	78.089	ENSCPOG00000003297	NEIL3	100	78.089	Cavia_porcellus
ENSBTAG00000005825	NEIL3	100	78.089	ENSCCAG00000018838	NEIL3	100	78.089	Cebus_capucinus
ENSBTAG00000005825	NEIL3	100	76.606	ENSCLAG00000015661	NEIL3	100	76.606	Chinchilla_lanigera
ENSBTAG00000005825	NEIL3	100	76.606	ENSCSAG00000003064	NEIL3	100	76.606	Chlorocebus_sabaeus
ENSBTAG00000005825	NEIL3	77	86.441	ENSCHOG00000008101	NEIL3	77	86.441	Choloepus_hoffmanni
ENSBTAG00000005825	NEIL3	100	76.442	ENSCANG00000043622	NEIL3	100	76.442	Colobus_angolensis_palliatus
ENSBTAG00000005825	NEIL3	100	51.053	ENSCSEG00000003828	neil3	99	51.053	Cynoglossus_semilaevis
ENSBTAG00000005825	NEIL3	100	51.713	ENSDARG00000020079	neil3	100	51.550	Danio_rerio
ENSBTAG00000005825	NEIL3	86	80.577	ENSDNOG00000012236	NEIL3	100	80.577	Dasypus_novemcinctus
ENSBTAG00000005825	NEIL3	100	78.748	ENSEASG00005022272	NEIL3	100	78.748	Equus_asinus_asinus
ENSBTAG00000005825	NEIL3	100	77.924	ENSECAG00000009121	NEIL3	100	77.924	Equus_caballus
ENSBTAG00000005825	NEIL3	74	69.757	ENSEEUG00000010848	NEIL3	100	70.199	Erinaceus_europaeus
ENSBTAG00000005825	NEIL3	100	79.242	ENSFCAG00000004956	NEIL3	100	79.242	Felis_catus
ENSBTAG00000005825	NEIL3	100	50.567	ENSHBUG00000023848	neil3	100	50.567	Haplochromis_burtoni
ENSBTAG00000005825	NEIL3	86	79.655	ENSHGLG00000006643	NEIL3	100	79.655	Heterocephalus_glaber_female
ENSBTAG00000005825	NEIL3	86	79.655	ENSHGLG00100006959	NEIL3	100	79.655	Heterocephalus_glaber_male
ENSBTAG00000005825	NEIL3	100	77.924	ENSSTOG00000016245	NEIL3	100	77.924	Ictidomys_tridecemlineatus
ENSBTAG00000005825	NEIL3	63	55.928	ENSLACG00000000308	NEIL3	99	55.928	Latimeria_chalumnae
ENSBTAG00000005825	NEIL3	100	77.265	ENSMFAG00000002547	NEIL3	100	77.265	Macaca_fascicularis
ENSBTAG00000005825	NEIL3	100	77.265	ENSMMUG00000007394	NEIL3	100	77.265	Macaca_mulatta
ENSBTAG00000005825	NEIL3	100	77.265	ENSMNEG00000036177	NEIL3	100	77.265	Macaca_nemestrina
ENSBTAG00000005825	NEIL3	100	51.858	ENSMAMG00000017052	neil3	100	51.858	Mastacembelus_armatus
ENSBTAG00000005825	NEIL3	100	51.452	ENSMZEG00005001680	neil3	100	51.452	Maylandia_zebra
ENSBTAG00000005825	NEIL3	90	62.633	ENSMODG00000003813	NEIL3	99	61.854	Monodelphis_domestica
ENSBTAG00000005825	NEIL3	100	70.840	MGP_CAROLIEiJ_G0031052	Neil3	100	70.675	Mus_caroli
ENSBTAG00000005825	NEIL3	100	70.675	ENSMUSG00000039396	Neil3	100	70.675	Mus_musculus
ENSBTAG00000005825	NEIL3	100	70.840	MGP_PahariEiJ_G0021518	Neil3	100	70.675	Mus_pahari
ENSBTAG00000005825	NEIL3	100	71.334	MGP_SPRETEiJ_G0032167	Neil3	100	71.170	Mus_spretus
ENSBTAG00000005825	NEIL3	100	49.423	ENSNBRG00000013229	neil3	100	49.423	Neolamprologus_brichardi
ENSBTAG00000005825	NEIL3	100	77.924	ENSNLEG00000016818	NEIL3	100	77.924	Nomascus_leucogenys
ENSBTAG00000005825	NEIL3	100	77.759	ENSODEG00000004102	NEIL3	100	77.759	Octodon_degus
ENSBTAG00000005825	NEIL3	100	51.053	ENSONIG00000001176	neil3	100	51.053	Oreochromis_niloticus
ENSBTAG00000005825	NEIL3	99	77.500	ENSOCUG00000001040	NEIL3	99	77.500	Oryctolagus_cuniculus
ENSBTAG00000005825	NEIL3	100	48.885	ENSOMEG00000014798	neil3	100	48.325	Oryzias_melastigma
ENSBTAG00000005825	NEIL3	100	78.913	ENSOGAG00000012624	NEIL3	100	78.913	Otolemur_garnettii
ENSBTAG00000005825	NEIL3	96	92.241	ENSOARG00000006852	NEIL3	100	94.946	Ovis_aries
ENSBTAG00000005825	NEIL3	100	78.418	ENSPPAG00000035318	NEIL3	100	78.418	Pan_paniscus
ENSBTAG00000005825	NEIL3	100	79.736	ENSPPRG00000003958	NEIL3	100	79.736	Panthera_pardus
ENSBTAG00000005825	NEIL3	100	79.901	ENSPTIG00000012966	NEIL3	100	79.901	Panthera_tigris_altaica
ENSBTAG00000005825	NEIL3	100	78.583	ENSPTRG00000016617	NEIL3	100	78.583	Pan_troglodytes
ENSBTAG00000005825	NEIL3	100	77.430	ENSPANG00000014727	NEIL3	100	77.430	Papio_anubis
ENSBTAG00000005825	NEIL3	100	49.837	ENSPFOG00000018858	neil3	100	49.837	Poecilia_formosa
ENSBTAG00000005825	NEIL3	100	49.510	ENSPLAG00000010685	neil3	100	49.510	Poecilia_latipinna
ENSBTAG00000005825	NEIL3	100	49.837	ENSPMEG00000013971	neil3	100	49.837	Poecilia_mexicana
ENSBTAG00000005825	NEIL3	100	49.346	ENSPREG00000009841	neil3	100	49.346	Poecilia_reticulata
ENSBTAG00000005825	NEIL3	68	79.661	ENSPCAG00000006386	NEIL3	81	79.661	Procavia_capensis
ENSBTAG00000005825	NEIL3	77	86.555	ENSPCOG00000010888	NEIL3	97	86.555	Propithecus_coquereli
ENSBTAG00000005825	NEIL3	99	77.686	ENSPVAG00000002255	NEIL3	99	77.686	Pteropus_vampyrus
ENSBTAG00000005825	NEIL3	100	51.307	ENSPNYG00000021276	neil3	100	51.307	Pundamilia_nyererei
ENSBTAG00000005825	NEIL3	98	48.403	ENSPNAG00000019983	neil3	100	48.403	Pygocentrus_nattereri
ENSBTAG00000005825	NEIL3	100	70.346	ENSRNOG00000011688	Neil3	100	70.346	Rattus_norvegicus
ENSBTAG00000005825	NEIL3	100	76.936	ENSRBIG00000023002	NEIL3	100	76.936	Rhinopithecus_bieti
ENSBTAG00000005825	NEIL3	100	76.936	ENSRROG00000000069	NEIL3	100	76.936	Rhinopithecus_roxellana
ENSBTAG00000005825	NEIL3	100	77.759	ENSSBOG00000032601	NEIL3	100	77.759	Saimiri_boliviensis_boliviensis
ENSBTAG00000005825	NEIL3	100	67.763	ENSSHAG00000007680	NEIL3	100	67.763	Sarcophilus_harrisii
ENSBTAG00000005825	NEIL3	100	51.303	ENSSMAG00000009621	neil3	100	51.303	Scophthalmus_maximus
ENSBTAG00000005825	NEIL3	100	82.508	ENSSSCG00000015771	NEIL3	100	82.508	Sus_scrofa
ENSBTAG00000005825	NEIL3	100	84.488	ENSTTRG00000013224	NEIL3	100	84.488	Tursiops_truncatus
ENSBTAG00000005825	NEIL3	100	73.476	ENSVPAG00000005020	NEIL3	100	73.476	Vicugna_pacos
ENSBTAG00000005825	NEIL3	90	48.101	ENSXCOG00000014831	neil3	100	48.000	Xiphophorus_couchianus
ENSBTAG00000005825	NEIL3	100	49.268	ENSXMAG00000028638	neil3	100	49.268	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000405	bubble DNA binding	-	ISS	Function
GO:0003684	damaged DNA binding	-	IEA	Function
GO:0003690	double-stranded DNA binding	-	ISS	Function
GO:0003697	single-stranded DNA binding	-	ISS	Function
GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0006284	base-excision repair	-	ISS	Process
GO:0006289	nucleotide-excision repair	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0019104	DNA N-glycosylase activity	-	ISS	Function
GO:0140078	class I DNA-(apurinic or apyrimidinic site) endonuclease activity	-	IEA	Function