EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000005898 (Gene tree)
Gene ID: 511392
Gene Symbol: TGS1
Alias: -
Full Name: Bos taurus trimethylguanosine synthase 1 (TGS1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 25805 bases
Position: chr14:23070145-23095949
Accession: NM_001205698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000007749	Methyltransf_15	PF09445.10	7.1e-42	1	1
ENSBTAP00000007749	UPF0020	PF01170.18	4.9e-07	1	1
ENSBTAP00000007749	Met_10	PF02475.16	7.5e-06	1	1
ENSBTAP00000007749	Methyltransf_31	PF13847.6	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000007749	-	3029	XM_005215408	ENSBTAP00000007749	852 (aa)	XP_005215465	F1N1K9

Gene Model

Click here to download ENSBTAG00000005898's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000005898	TGS1	100	73.629	ENSG00000137574	TGS1	100	73.396	Homo_sapiens
ENSBTAG00000005898	TGS1	66	38.963	ENSAPOG00000004321	-	99	39.219	Acanthochromis_polyacanthus
ENSBTAG00000005898	TGS1	100	76.834	ENSAMEG00000001781	TGS1	100	76.717	Ailuropoda_melanoleuca
ENSBTAG00000005898	TGS1	90	35.907	ENSATEG00000005927	lyn	89	35.907	Anabas_testudineus
ENSBTAG00000005898	TGS1	77	48.429	ENSAPLG00000006073	-	100	49.286	Anas_platyrhynchos
ENSBTAG00000005898	TGS1	99	49.055	ENSACAG00000017988	TGS1	92	49.556	Anolis_carolinensis
ENSBTAG00000005898	TGS1	99	66.667	ENSANAG00000035525	TGS1	100	65.965	Aotus_nancymaae
ENSBTAG00000005898	TGS1	97	38.045	ENSACLG00000000261	lyn	98	37.628	Astatotilapia_calliptera
ENSBTAG00000005898	TGS1	98	38.269	ENSAMXG00000014086	lyn	98	37.935	Astyanax_mexicanus
ENSBTAG00000005898	TGS1	99	72.929	ENSCJAG00000016657	TGS1	98	72.229	Callithrix_jacchus
ENSBTAG00000005898	TGS1	100	75.437	ENSCAFG00000007011	TGS1	100	75.320	Canis_familiaris
ENSBTAG00000005898	TGS1	100	74.476	ENSCAFG00020015485	TGS1	100	74.359	Canis_lupus_dingo
ENSBTAG00000005898	TGS1	100	94.256	ENSCHIG00000013976	TGS1	100	94.256	Capra_hircus
ENSBTAG00000005898	TGS1	100	71.963	ENSTSYG00000000171	TGS1	100	71.379	Carlito_syrichta
ENSBTAG00000005898	TGS1	96	63.659	ENSCAPG00000013732	TGS1	99	62.515	Cavia_aperea
ENSBTAG00000005898	TGS1	100	67.251	ENSCPOG00000009713	TGS1	99	66.784	Cavia_porcellus
ENSBTAG00000005898	TGS1	99	74.359	ENSCCAG00000030476	TGS1	99	73.776	Cebus_capucinus
ENSBTAG00000005898	TGS1	100	73.862	ENSCATG00000035375	TGS1	100	73.512	Cercocebus_atys
ENSBTAG00000005898	TGS1	100	69.204	ENSCLAG00000009468	TGS1	99	68.852	Chinchilla_lanigera
ENSBTAG00000005898	TGS1	93	71.840	ENSCSAG00000014611	TGS1	99	71.464	Chlorocebus_sabaeus
ENSBTAG00000005898	TGS1	100	69.697	ENSCHOG00000001462	TGS1	100	68.881	Choloepus_hoffmanni
ENSBTAG00000005898	TGS1	99	53.244	ENSCPBG00000004958	TGS1	99	52.744	Chrysemys_picta_bellii
ENSBTAG00000005898	TGS1	100	73.629	ENSCANG00000041389	TGS1	100	73.162	Colobus_angolensis_palliatus
ENSBTAG00000005898	TGS1	100	66.860	ENSCGRG00001019470	Tgs1	99	66.512	Cricetulus_griseus_chok1gshd
ENSBTAG00000005898	TGS1	100	68.250	ENSCGRG00000008981	Tgs1	99	66.744	Cricetulus_griseus_crigri
ENSBTAG00000005898	TGS1	98	38.259	ENSDARG00000107511	lyn	99	71.667	Danio_rerio
ENSBTAG00000005898	TGS1	99	71.963	ENSDNOG00000008353	TGS1	99	71.612	Dasypus_novemcinctus
ENSBTAG00000005898	TGS1	100	68.970	ENSDORG00000012484	Tgs1	100	67.681	Dipodomys_ordii
ENSBTAG00000005898	TGS1	81	66.667	ENSETEG00000005126	TGS1	85	66.667	Echinops_telfairi
ENSBTAG00000005898	TGS1	93	76.700	ENSEASG00005016371	TGS1	95	76.322	Equus_asinus_asinus
ENSBTAG00000005898	TGS1	100	77.946	ENSECAG00000019399	TGS1	99	77.596	Equus_caballus
ENSBTAG00000005898	TGS1	70	93.939	ENSEEUG00000001735	TGS1	70	93.939	Erinaceus_europaeus
ENSBTAG00000005898	TGS1	86	73.832	ENSELUG00000012537	lyn	83	73.832	Esox_lucius
ENSBTAG00000005898	TGS1	100	75.291	ENSFCAG00000011478	TGS1	100	75.641	Felis_catus
ENSBTAG00000005898	TGS1	88	48.259	ENSFALG00000010249	TGS1	99	49.627	Ficedula_albicollis
ENSBTAG00000005898	TGS1	100	69.438	ENSFDAG00000011405	TGS1	100	69.087	Fukomys_damarensis
ENSBTAG00000005898	TGS1	97	48.864	ENSGALG00000015340	TGS1	98	49.773	Gallus_gallus
ENSBTAG00000005898	TGS1	99	53.915	ENSGAGG00000019590	TGS1	99	54.283	Gopherus_agassizii
ENSBTAG00000005898	TGS1	100	73.862	ENSGGOG00000008624	TGS1	100	73.512	Gorilla_gorilla
ENSBTAG00000005898	TGS1	69	35.541	ENSHBUG00000003518	lyn	100	35.577	Haplochromis_burtoni
ENSBTAG00000005898	TGS1	77	75.000	ENSHGLG00000000284	TGS1	88	75.000	Heterocephalus_glaber_female
ENSBTAG00000005898	TGS1	97	38.908	ENSHCOG00000014161	lyn	97	40.095	Hippocampus_comes
ENSBTAG00000005898	TGS1	77	42.060	ENSIPUG00000002294	tgs1	99	38.565	Ictalurus_punctatus
ENSBTAG00000005898	TGS1	100	70.280	ENSSTOG00000009597	TGS1	100	69.697	Ictidomys_tridecemlineatus
ENSBTAG00000005898	TGS1	99	66.901	ENSJJAG00000016239	Tgs1	99	65.962	Jaculus_jaculus
ENSBTAG00000005898	TGS1	96	37.632	ENSKMAG00000019371	-	96	36.651	Kryptolebias_marmoratus
ENSBTAG00000005898	TGS1	99	46.548	ENSLACG00000008074	TGS1	100	46.325	Latimeria_chalumnae
ENSBTAG00000005898	TGS1	99	41.657	ENSLOCG00000005492	lyn	99	41.744	Lepisosteus_oculatus
ENSBTAG00000005898	TGS1	100	67.599	ENSLAFG00000015386	TGS1	100	67.442	Loxodonta_africana
ENSBTAG00000005898	TGS1	100	73.979	ENSMFAG00000029838	TGS1	100	73.512	Macaca_fascicularis
ENSBTAG00000005898	TGS1	100	73.629	ENSMMUG00000005478	TGS1	100	73.279	Macaca_mulatta
ENSBTAG00000005898	TGS1	100	73.862	ENSMNEG00000023719	TGS1	100	73.396	Macaca_nemestrina
ENSBTAG00000005898	TGS1	100	73.979	ENSMLEG00000034807	TGS1	100	73.629	Mandrillus_leucophaeus
ENSBTAG00000005898	TGS1	99	37.998	ENSMAMG00000009542	TGS1	94	41.090	Mastacembelus_armatus
ENSBTAG00000005898	TGS1	97	38.163	ENSMZEG00005015681	lyn	98	37.742	Maylandia_zebra
ENSBTAG00000005898	TGS1	84	48.613	ENSMGAG00000010966	TGS1	94	50.000	Meleagris_gallopavo
ENSBTAG00000005898	TGS1	100	68.561	ENSMAUG00000009875	Tgs1	99	67.599	Mesocricetus_auratus
ENSBTAG00000005898	TGS1	100	73.427	ENSMICG00000011199	TGS1	100	72.960	Microcebus_murinus
ENSBTAG00000005898	TGS1	99	66.550	ENSMOCG00000019560	Tgs1	99	66.161	Microtus_ochrogaster
ENSBTAG00000005898	TGS1	50	67.117	ENSMMOG00000021495	lyn	64	67.117	Mola_mola
ENSBTAG00000005898	TGS1	86	62.517	ENSMODG00000009174	TGS1	98	62.249	Monodelphis_domestica
ENSBTAG00000005898	TGS1	64	73.799	ENSMALG00000021440	lyn	80	76.389	Monopterus_albus
ENSBTAG00000005898	TGS1	99	67.606	MGP_CAROLIEiJ_G0025779	-	99	66.901	Mus_caroli
ENSBTAG00000005898	TGS1	99	61.227	MGP_CAROLIEiJ_G0025780	-	98	60.532	Mus_caroli
ENSBTAG00000005898	TGS1	100	66.976	ENSMUSG00000028233	Tgs1	99	66.280	Mus_musculus
ENSBTAG00000005898	TGS1	99	60.970	MGP_PahariEiJ_G0023902	-	98	60.277	Mus_pahari
ENSBTAG00000005898	TGS1	99	67.330	MGP_PahariEiJ_G0023901	-	99	66.628	Mus_pahari
ENSBTAG00000005898	TGS1	99	66.823	MGP_SPRETEiJ_G0026727	-	99	66.432	Mus_spretus
ENSBTAG00000005898	TGS1	66	66.221	MGP_SPRETEiJ_G0026726	-	97	66.221	Mus_spretus
ENSBTAG00000005898	TGS1	93	74.685	ENSMPUG00000010475	TGS1	99	74.433	Mustela_putorius_furo
ENSBTAG00000005898	TGS1	100	73.832	ENSMLUG00000014857	TGS1	100	73.248	Myotis_lucifugus
ENSBTAG00000005898	TGS1	100	68.757	ENSNGAG00000019532	Tgs1	99	68.372	Nannospalax_galili
ENSBTAG00000005898	TGS1	100	73.862	ENSNLEG00000001101	TGS1	100	73.512	Nomascus_leucogenys
ENSBTAG00000005898	TGS1	93	60.150	ENSMEUG00000001697	TGS1	99	60.200	Notamacropus_eugenii
ENSBTAG00000005898	TGS1	91	64.450	ENSODEG00000002948	TGS1	100	62.564	Octodon_degus
ENSBTAG00000005898	TGS1	77	40.462	ENSONIG00000006339	lyn	92	40.376	Oreochromis_niloticus
ENSBTAG00000005898	TGS1	89	59.027	ENSOANG00000021853	TGS1	98	59.027	Ornithorhynchus_anatinus
ENSBTAG00000005898	TGS1	100	71.612	ENSOCUG00000017522	TGS1	100	71.379	Oryctolagus_cuniculus
ENSBTAG00000005898	TGS1	76	40.416	ENSOMEG00000020174	lyn	80	38.582	Oryzias_melastigma
ENSBTAG00000005898	TGS1	100	72.061	ENSOGAG00000012572	TGS1	100	71.828	Otolemur_garnettii
ENSBTAG00000005898	TGS1	100	94.393	ENSOARG00000014613	TGS1	100	94.393	Ovis_aries
ENSBTAG00000005898	TGS1	100	73.862	ENSPPAG00000039058	TGS1	100	73.512	Pan_paniscus
ENSBTAG00000005898	TGS1	100	75.291	ENSPPRG00000000677	TGS1	100	75.291	Panthera_pardus
ENSBTAG00000005898	TGS1	100	75.408	ENSPTIG00000005122	TGS1	100	75.408	Panthera_tigris_altaica
ENSBTAG00000005898	TGS1	100	73.862	ENSPTRG00000020262	TGS1	100	73.512	Pan_troglodytes
ENSBTAG00000005898	TGS1	100	73.979	ENSPANG00000018910	TGS1	100	73.629	Papio_anubis
ENSBTAG00000005898	TGS1	76	42.618	ENSPKIG00000005454	lyn	67	42.424	Paramormyrops_kingsleyae
ENSBTAG00000005898	TGS1	99	53.311	ENSPSIG00000014983	TGS1	99	53.415	Pelodiscus_sinensis
ENSBTAG00000005898	TGS1	58	66.809	ENSPMGG00000012711	lyn	71	70.270	Periophthalmus_magnuspinnatus
ENSBTAG00000005898	TGS1	100	67.517	ENSPEMG00000007957	Tgs1	99	67.523	Peromyscus_maniculatus_bairdii
ENSBTAG00000005898	TGS1	99	63.657	ENSPCIG00000016232	TGS1	99	63.268	Phascolarctos_cinereus
ENSBTAG00000005898	TGS1	76	41.642	ENSPFOG00000001545	-	99	40.616	Poecilia_formosa
ENSBTAG00000005898	TGS1	90	34.227	ENSPREG00000012261	-	96	33.942	Poecilia_reticulata
ENSBTAG00000005898	TGS1	100	73.746	ENSPPYG00000018597	TGS1	100	73.162	Pongo_abelii
ENSBTAG00000005898	TGS1	100	66.589	ENSPCAG00000000143	TGS1	100	66.121	Procavia_capensis
ENSBTAG00000005898	TGS1	100	73.077	ENSPCOG00000013537	TGS1	100	72.727	Propithecus_coquereli
ENSBTAG00000005898	TGS1	100	70.574	ENSPVAG00000016399	TGS1	100	70.223	Pteropus_vampyrus
ENSBTAG00000005898	TGS1	88	38.287	ENSPNYG00000023004	lyn	87	37.875	Pundamilia_nyererei
ENSBTAG00000005898	TGS1	99	40.046	ENSPNAG00000022249	lyn	99	40.275	Pygocentrus_nattereri
ENSBTAG00000005898	TGS1	99	67.640	ENSRNOG00000008156	Tgs1	99	67.407	Rattus_norvegicus
ENSBTAG00000005898	TGS1	100	71.529	ENSRBIG00000041893	TGS1	100	71.179	Rhinopithecus_bieti
ENSBTAG00000005898	TGS1	100	73.746	ENSRROG00000035127	TGS1	100	73.396	Rhinopithecus_roxellana
ENSBTAG00000005898	TGS1	96	71.829	ENSSBOG00000024469	TGS1	99	71.220	Saimiri_boliviensis_boliviensis
ENSBTAG00000005898	TGS1	99	61.806	ENSSHAG00000012878	TGS1	99	61.574	Sarcophilus_harrisii
ENSBTAG00000005898	TGS1	96	38.668	ENSSFOG00015001308	tgs1	96	38.551	Scleropages_formosus
ENSBTAG00000005898	TGS1	76	40.795	ENSSMAG00000019469	lyn	96	37.414	Scophthalmus_maximus
ENSBTAG00000005898	TGS1	93	34.503	ENSSPAG00000002170	lyn	94	35.439	Stegastes_partitus
ENSBTAG00000005898	TGS1	90	73.446	ENSSSCG00000006251	TGS1	98	73.057	Sus_scrofa
ENSBTAG00000005898	TGS1	96	50.060	ENSTGUG00000011050	TGS1	100	50.417	Taeniopygia_guttata
ENSBTAG00000005898	TGS1	53	65.581	ENSTRUG00000009532	lyn	65	65.581	Takifugu_rubripes
ENSBTAG00000005898	TGS1	85	88.525	ENSTBEG00000010953	TGS1	85	88.525	Tupaia_belangeri
ENSBTAG00000005898	TGS1	100	74.620	ENSTTRG00000017239	TGS1	100	74.035	Tursiops_truncatus
ENSBTAG00000005898	TGS1	100	75.963	ENSUAMG00000027718	TGS1	100	75.496	Ursus_americanus
ENSBTAG00000005898	TGS1	93	75.346	ENSUMAG00000009761	TGS1	99	74.969	Ursus_maritimus
ENSBTAG00000005898	TGS1	84	72.045	ENSVPAG00000001166	TGS1	88	72.045	Vicugna_pacos
ENSBTAG00000005898	TGS1	93	73.459	ENSVVUG00000017821	TGS1	99	73.333	Vulpes_vulpes
ENSBTAG00000005898	TGS1	100	45.682	ENSXETG00000005648	tgs1	100	45.000	Xenopus_tropicalis