EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSBTAG00000005913 (Gene tree)
Gene ID
537453
Gene Symbol
PATL1
Alias
-
Full Name
Bos taurus PAT1 homolog 1%2C processing body mRNA decay factor (PATL1)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Minus strand
Length
28157 bases
Position
chr15:82831299-82859455
Accession
NM_001193207
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000061065PAT1PF09770.97.2e-1511
ENSBTAP00000007768PAT1PF09770.93e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000007768-4067-ENSBTAP00000007768771 (aa)-F1N1E7
ENSBTAT00000072254-3151-ENSBTAP00000061065806 (aa)--
Gene Model
Click here to download ENSBTAG00000005913's gene model file
Pathways
Pathway IDPathway NameSource
bta03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000005913's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000005913PATL16333.881ENSG00000229474PATL29936.538Homo_sapiens
ENSBTAG00000005913PATL110095.331ENSG00000166889PATL110095.331Homo_sapiens
ENSBTAG00000005913PATL15452.758ENSAPOG00000021290patl19846.058Acanthochromis_polyacanthus
ENSBTAG00000005913PATL16834.191ENSAPOG00000022988patl27333.333Acanthochromis_polyacanthus
ENSBTAG00000005913PATL16233.333ENSAMEG00000014997PATL27534.223Ailuropoda_melanoleuca
ENSBTAG00000005913PATL110095.201ENSAMEG00000014215PATL110095.201Ailuropoda_melanoleuca
ENSBTAG00000005913PATL19646.341ENSACIG00000005182patl19947.146Amphilophus_citrinellus
ENSBTAG00000005913PATL16933.880ENSAOCG00000023738patl25633.539Amphiprion_ocellaris
ENSBTAG00000005913PATL15580.645ENSAPEG00000021391patl18257.831Amphiprion_percula
ENSBTAG00000005913PATL16733.269ENSAPEG00000011299patl26833.195Amphiprion_percula
ENSBTAG00000005913PATL18478.788ENSATEG00000002230patl18353.933Anabas_testudineus
ENSBTAG00000005913PATL16434.714ENSATEG00000019567patl27034.055Anabas_testudineus
ENSBTAG00000005913PATL15338.741ENSAPLG00000003980PATL26438.741Anas_platyrhynchos
ENSBTAG00000005913PATL17170.833ENSAPLG00000013394PATL19970.856Anas_platyrhynchos
ENSBTAG00000005913PATL19979.922ENSACAG00000006607PATL19979.145Anolis_carolinensis
ENSBTAG00000005913PATL110095.590ENSANAG00000023078PATL110095.590Aotus_nancymaae
ENSBTAG00000005913PATL18731.563ENSACLG00000010326patl25436.038Astatotilapia_calliptera
ENSBTAG00000005913PATL16266.667ENSACLG00000005144patl18450.382Astatotilapia_calliptera
ENSBTAG00000005913PATL18252.632ENSAMXG00000010731patl19946.477Astyanax_mexicanus
ENSBTAG00000005913PATL17632.428ENSAMXG00000020293patl26734.451Astyanax_mexicanus
ENSBTAG00000005913PATL110095.331ENSCJAG00000016192PATL110095.201Callithrix_jacchus
ENSBTAG00000005913PATL16334.568ENSCJAG00000002379PATL27235.990Callithrix_jacchus
ENSBTAG00000005913PATL16434.004ENSCAFG00000013629PATL27235.507Canis_familiaris
ENSBTAG00000005913PATL110095.850ENSCAFG00000007581PATL110095.850Canis_familiaris
ENSBTAG00000005913PATL19995.817ENSCAFG00020001648PATL110095.817Canis_lupus_dingo
ENSBTAG00000005913PATL16434.004ENSCAFG00020022169PATL27235.507Canis_lupus_dingo
ENSBTAG00000005913PATL110097.147ENSCHIG00000025913PATL110097.147Capra_hircus
ENSBTAG00000005913PATL16036.717ENSCHIG00000026665PATL27437.352Capra_hircus
ENSBTAG00000005913PATL19995.182ENSTSYG00000012748PATL19694.922Carlito_syrichta
ENSBTAG00000005913PATL110090.933ENSCAPG00000013668PATL19991.051Cavia_aperea
ENSBTAG00000005913PATL110088.861ENSCPOG00000006827PATL110088.861Cavia_porcellus
ENSBTAG00000005913PATL110095.850ENSCCAG00000023759PATL110095.850Cebus_capucinus
ENSBTAG00000005913PATL110095.460ENSCATG00000009629PATL110095.460Cercocebus_atys
ENSBTAG00000005913PATL19990.731ENSCLAG00000003427PATL110090.601Chinchilla_lanigera
ENSBTAG00000005913PATL15635.135ENSCLAG00000014407PATL27336.041Chinchilla_lanigera
ENSBTAG00000005913PATL19095.259ENSCSAG00000006095PATL110095.259Chlorocebus_sabaeus
ENSBTAG00000005913PATL16896.970ENSCHOG00000001611PATL18496.970Choloepus_hoffmanni
ENSBTAG00000005913PATL15338.983ENSCPBG00000006150PATL25938.499Chrysemys_picta_bellii
ENSBTAG00000005913PATL19995.584ENSCANG00000039197PATL19997.561Colobus_angolensis_palliatus
ENSBTAG00000005913PATL16334.086ENSCANG00000013856PATL28534.426Colobus_angolensis_palliatus
ENSBTAG00000005913PATL110094.812ENSCGRG00001024927Patl110094.812Cricetulus_griseus_chok1gshd
ENSBTAG00000005913PATL110094.301ENSCGRG00000000461Patl110094.778Cricetulus_griseus_crigri
ENSBTAG00000005913PATL16233.884ENSCSEG00000009438patl26333.058Cynoglossus_semilaevis
ENSBTAG00000005913PATL18476.667ENSCSEG00000008261patl18253.488Cynoglossus_semilaevis
ENSBTAG00000005913PATL16031.250ENSCVAG00000016203patl26331.034Cyprinodon_variegatus
ENSBTAG00000005913PATL18951.435ENSCVAG00000006664patl110046.784Cyprinodon_variegatus
ENSBTAG00000005913PATL19946.312ENSDARG00000017423patl110046.191Danio_rerio
ENSBTAG00000005913PATL16734.840ENSDARG00000089567patl26435.446Danio_rerio
ENSBTAG00000005913PATL19988.903ENSDNOG00000038865PATL19894.291Dasypus_novemcinctus
ENSBTAG00000005913PATL15136.573ENSDORG00000026649Patl27235.806Dipodomys_ordii
ENSBTAG00000005913PATL110094.812ENSDORG00000000237Patl110094.812Dipodomys_ordii
ENSBTAG00000005913PATL110096.373ENSEASG00005007963PATL110096.373Equus_asinus_asinus
ENSBTAG00000005913PATL110096.244ENSECAG00000011411PATL110096.244Equus_caballus
ENSBTAG00000005913PATL18271.429ENSELUG00000024249patl19946.073Esox_lucius
ENSBTAG00000005913PATL16934.078ENSELUG00000023244patl25435.885Esox_lucius
ENSBTAG00000005913PATL16334.221ENSFCAG00000027170PATL27335.096Felis_catus
ENSBTAG00000005913PATL110095.720ENSFCAG00000015573PATL110094.812Felis_catus
ENSBTAG00000005913PATL19980.469ENSFALG00000012150PATL19978.879Ficedula_albicollis
ENSBTAG00000005913PATL15134.500ENSFDAG00000012242PATL27335.750Fukomys_damarensis
ENSBTAG00000005913PATL19992.037ENSFDAG00000016128PATL110091.906Fukomys_damarensis
ENSBTAG00000005913PATL16166.667ENSFHEG00000017790patl18358.333Fundulus_heteroclitus
ENSBTAG00000005913PATL16131.535ENSGMOG00000005666patl29933.493Gadus_morhua
ENSBTAG00000005913PATL19978.068ENSGALG00000042641PATL110077.807Gallus_gallus
ENSBTAG00000005913PATL18731.893ENSGAFG00000019344patl25536.473Gambusia_affinis
ENSBTAG00000005913PATL16458.904ENSGAFG00000006508patl18458.904Gambusia_affinis
ENSBTAG00000005913PATL19948.139ENSGACG00000016448patl19949.235Gasterosteus_aculeatus
ENSBTAG00000005913PATL110083.700ENSGAGG00000004461PATL110084.097Gopherus_agassizii
ENSBTAG00000005913PATL16333.951ENSGGOG00000025923PATL28534.221Gorilla_gorilla
ENSBTAG00000005913PATL110095.460ENSGGOG00000004335PATL110095.460Gorilla_gorilla
ENSBTAG00000005913PATL16234.639ENSHBUG00000005929patl26136.038Haplochromis_burtoni
ENSBTAG00000005913PATL16266.667ENSHBUG00000005365patl18450.382Haplochromis_burtoni
ENSBTAG00000005913PATL110092.088ENSHGLG00000018173PATL110092.218Heterocephalus_glaber_female
ENSBTAG00000005913PATL19990.470ENSHGLG00100003453PATL110090.601Heterocephalus_glaber_male
ENSBTAG00000005913PATL19265.000ENSHCOG00000001898patl18254.430Hippocampus_comes
ENSBTAG00000005913PATL16733.774ENSIPUG00000020692patl25635.731Ictalurus_punctatus
ENSBTAG00000005913PATL15337.349ENSSTOG00000033848PATL27236.627Ictidomys_tridecemlineatus
ENSBTAG00000005913PATL19895.520ENSSTOG00000013764PATL19995.520Ictidomys_tridecemlineatus
ENSBTAG00000005913PATL19993.856ENSJJAG00000010135Patl110093.856Jaculus_jaculus
ENSBTAG00000005913PATL16233.264ENSKMAG00000021275patl25434.368Kryptolebias_marmoratus
ENSBTAG00000005913PATL15680.000ENSKMAG00000020848patl17965.385Kryptolebias_marmoratus
ENSBTAG00000005913PATL19268.333ENSLBEG00000023617patl17968.333Labrus_bergylta
ENSBTAG00000005913PATL16135.146ENSLBEG00000022344patl25834.096Labrus_bergylta
ENSBTAG00000005913PATL19857.792ENSLACG00000004640PATL19957.124Latimeria_chalumnae
ENSBTAG00000005913PATL19830.545ENSLACG00000005291-9830.130Latimeria_chalumnae
ENSBTAG00000005913PATL19947.579ENSLOCG00000000717patl19947.705Lepisosteus_oculatus
ENSBTAG00000005913PATL110095.720ENSLAFG00000015161PATL110095.720Loxodonta_africana
ENSBTAG00000005913PATL15037.340ENSLAFG00000031124PATL27136.573Loxodonta_africana
ENSBTAG00000005913PATL110095.460ENSMFAG00000040851PATL110095.460Macaca_fascicularis
ENSBTAG00000005913PATL110095.460ENSMMUG00000017287PATL110095.460Macaca_mulatta
ENSBTAG00000005913PATL110095.460ENSMNEG00000038692PATL110095.460Macaca_nemestrina
ENSBTAG00000005913PATL110095.331ENSMLEG00000030044PATL110095.331Mandrillus_leucophaeus
ENSBTAG00000005913PATL16033.895ENSMAMG00000013327patl26134.917Mastacembelus_armatus
ENSBTAG00000005913PATL19644.753ENSMAMG00000003950patl19847.081Mastacembelus_armatus
ENSBTAG00000005913PATL16266.667ENSMZEG00005013404patl18450.382Maylandia_zebra
ENSBTAG00000005913PATL18731.563ENSMZEG00005014292patl25436.038Maylandia_zebra
ENSBTAG00000005913PATL19277.669ENSMGAG00000003406PATL19976.397Meleagris_gallopavo
ENSBTAG00000005913PATL18594.880ENSMAUG00000012059Patl19695.077Mesocricetus_auratus
ENSBTAG00000005913PATL19991.927ENSMICG00000004172PATL19897.946Microcebus_murinus
ENSBTAG00000005913PATL110095.071ENSMOCG00000010087Patl110095.071Microtus_ochrogaster
ENSBTAG00000005913PATL15235.572ENSMOCG00000015367Patl27234.913Microtus_ochrogaster
ENSBTAG00000005913PATL16230.126ENSMMOG00000001299patl26031.579Mola_mola
ENSBTAG00000005913PATL19945.817ENSMMOG00000013711patl110044.373Mola_mola
ENSBTAG00000005913PATL16235.378ENSMODG00000017690PATL27135.280Monodelphis_domestica
ENSBTAG00000005913PATL110087.953ENSMODG00000020201PATL110087.953Monodelphis_domestica
ENSBTAG00000005913PATL17755.496ENSMALG00000018706patl19755.496Monopterus_albus
ENSBTAG00000005913PATL15434.606ENSMALG00000008131patl25234.588Monopterus_albus
ENSBTAG00000005913PATL110094.163MGP_CAROLIEiJ_G0022739Patl110094.163Mus_caroli
ENSBTAG00000005913PATL110094.293ENSMUSG00000046139Patl110094.293Mus_musculus
ENSBTAG00000005913PATL110094.293MGP_PahariEiJ_G0014233Patl110094.293Mus_pahari
ENSBTAG00000005913PATL110094.423MGP_SPRETEiJ_G0023652Patl110094.423Mus_spretus
ENSBTAG00000005913PATL110095.850ENSMPUG00000014607PATL110095.850Mustela_putorius_furo
ENSBTAG00000005913PATL110093.126ENSMLUG00000011169PATL110092.477Myotis_lucifugus
ENSBTAG00000005913PATL110094.323ENSNGAG00000003682Patl110093.806Nannospalax_galili
ENSBTAG00000005913PATL16234.433ENSNBRG00000011745patl25835.800Neolamprologus_brichardi
ENSBTAG00000005913PATL19992.026ENSNLEG00000013081PATL110091.895Nomascus_leucogenys
ENSBTAG00000005913PATL16334.362ENSNLEG00000005673PATL28633.806Nomascus_leucogenys
ENSBTAG00000005913PATL16492.258ENSMEUG00000009391PATL17592.258Notamacropus_eugenii
ENSBTAG00000005913PATL16896.032ENSOPRG00000007963PATL17996.032Ochotona_princeps
ENSBTAG00000005913PATL17389.423ENSODEG00000001792PATL19592.014Octodon_degus
ENSBTAG00000005913PATL16235.464ENSONIG00000011519patl25436.190Oreochromis_niloticus
ENSBTAG00000005913PATL16266.667ENSONIG00000004170patl110048.191Oreochromis_niloticus
ENSBTAG00000005913PATL15136.634ENSOANG00000001538-8437.408Ornithorhynchus_anatinus
ENSBTAG00000005913PATL15186.902ENSOANG00000011117-9687.245Ornithorhynchus_anatinus
ENSBTAG00000005913PATL110095.590ENSOCUG00000002156PATL110095.590Oryctolagus_cuniculus
ENSBTAG00000005913PATL15235.000ENSOCUG00000006339PATL27435.000Oryctolagus_cuniculus
ENSBTAG00000005913PATL16433.597ENSORLG00000005780patl26333.333Oryzias_latipes
ENSBTAG00000005913PATL16433.992ENSORLG00020016506patl26133.728Oryzias_latipes_hni
ENSBTAG00000005913PATL16433.794ENSORLG00015014500patl26333.531Oryzias_latipes_hsok
ENSBTAG00000005913PATL18731.370ENSOMEG00000021628patl26234.096Oryzias_melastigma
ENSBTAG00000005913PATL110095.979ENSOGAG00000004351PATL110095.979Otolemur_garnettii
ENSBTAG00000005913PATL15334.867ENSOGAG00000004709PATL27234.762Otolemur_garnettii
ENSBTAG00000005913PATL19997.520ENSOARG00000012005PATL19697.520Ovis_aries
ENSBTAG00000005913PATL16134.958ENSOARG00000003762PATL27236.275Ovis_aries
ENSBTAG00000005913PATL16334.292ENSPPAG00000007221PATL28433.806Pan_paniscus
ENSBTAG00000005913PATL110095.460ENSPPAG00000034275PATL110095.460Pan_paniscus
ENSBTAG00000005913PATL16334.016ENSPPRG00000004279PATL27334.856Panthera_pardus
ENSBTAG00000005913PATL19995.692ENSPPRG00000020639PATL110094.778Panthera_pardus
ENSBTAG00000005913PATL16333.811ENSPTIG00000018964PATL27334.615Panthera_tigris_altaica
ENSBTAG00000005913PATL110095.720ENSPTIG00000019298PATL110094.812Panthera_tigris_altaica
ENSBTAG00000005913PATL19987.320ENSPTRG00000003697PATL110087.320Pan_troglodytes
ENSBTAG00000005913PATL16333.951ENSPTRG00000041536PATL28433.603Pan_troglodytes
ENSBTAG00000005913PATL110095.460ENSPANG00000035620PATL110095.460Papio_anubis
ENSBTAG00000005913PATL19946.569ENSPKIG00000016224patl19947.672Paramormyrops_kingsleyae
ENSBTAG00000005913PATL15336.643ENSPSIG00000017690PATL29536.634Pelodiscus_sinensis
ENSBTAG00000005913PATL110083.182ENSPSIG00000016206PATL19682.794Pelodiscus_sinensis
ENSBTAG00000005913PATL18953.957ENSPMGG00000002644patl19945.455Periophthalmus_magnuspinnatus
ENSBTAG00000005913PATL15934.864ENSPMGG00000014550patl26335.129Periophthalmus_magnuspinnatus
ENSBTAG00000005913PATL110094.812ENSPEMG00000014215Patl110094.812Peromyscus_maniculatus_bairdii
ENSBTAG00000005913PATL16233.811ENSPEMG00000016509Patl27035.550Peromyscus_maniculatus_bairdii
ENSBTAG00000005913PATL110088.083ENSPCIG00000010852PATL110088.083Phascolarctos_cinereus
ENSBTAG00000005913PATL16533.268ENSPCIG00000018256PATL27635.872Phascolarctos_cinereus
ENSBTAG00000005913PATL110046.531ENSPFOG00000007768patl110047.129Poecilia_formosa
ENSBTAG00000005913PATL18732.006ENSPFOG00000007305patl25435.990Poecilia_formosa
ENSBTAG00000005913PATL19730.769ENSPLAG00000020713patl25435.990Poecilia_latipinna
ENSBTAG00000005913PATL15553.682ENSPLAG00000018465patl17650.606Poecilia_latipinna
ENSBTAG00000005913PATL18549.848ENSPMEG00000006555patl17650.606Poecilia_mexicana
ENSBTAG00000005913PATL19731.388ENSPMEG00000018942patl25435.990Poecilia_mexicana
ENSBTAG00000005913PATL17447.561ENSPREG00000003874patl17050.174Poecilia_reticulata
ENSBTAG00000005913PATL110096.498ENSPPYG00000003230PATL110096.498Pongo_abelii
ENSBTAG00000005913PATL15336.715ENSPCOG00000000295PATL29937.912Propithecus_coquereli
ENSBTAG00000005913PATL110095.590ENSPCOG00000020770PATL110095.590Propithecus_coquereli
ENSBTAG00000005913PATL18590.244ENSPVAG00000015239PATL110090.701Pteropus_vampyrus
ENSBTAG00000005913PATL16234.227ENSPNYG00000017381patl26135.646Pundamilia_nyererei
ENSBTAG00000005913PATL17853.172ENSPNYG00000018936patl19753.153Pundamilia_nyererei
ENSBTAG00000005913PATL16235.774ENSPNAG00000002315patl26335.208Pygocentrus_nattereri
ENSBTAG00000005913PATL19945.728ENSPNAG00000017907patl19946.098Pygocentrus_nattereri
ENSBTAG00000005913PATL110094.034ENSRNOG00000021052Patl110094.034Rattus_norvegicus
ENSBTAG00000005913PATL110085.236ENSRBIG00000032263PATL110085.236Rhinopithecus_bieti
ENSBTAG00000005913PATL110095.590ENSRROG00000032861PATL110095.590Rhinopithecus_roxellana
ENSBTAG00000005913PATL110095.590ENSSBOG00000025195PATL110095.590Saimiri_boliviensis_boliviensis
ENSBTAG00000005913PATL110088.501ENSSHAG00000004309PATL110088.501Sarcophilus_harrisii
ENSBTAG00000005913PATL19945.322ENSSFOG00015009614patl19946.981Scleropages_formosus
ENSBTAG00000005913PATL18733.038ENSSFOG00015000720patl25537.500Scleropages_formosus
ENSBTAG00000005913PATL16533.531ENSSMAG00000017262patl27432.809Scophthalmus_maximus
ENSBTAG00000005913PATL19261.667ENSSMAG00000009482patl18153.086Scophthalmus_maximus
ENSBTAG00000005913PATL19268.333ENSSDUG00000005362patl17959.722Seriola_dumerili
ENSBTAG00000005913PATL16235.124ENSSDUG00000022927patl26034.298Seriola_dumerili
ENSBTAG00000005913PATL16834.019ENSSLDG00000017922patl25936.538Seriola_lalandi_dorsalis
ENSBTAG00000005913PATL19266.667ENSSLDG00000019146patl17958.333Seriola_lalandi_dorsalis
ENSBTAG00000005913PATL15136.294ENSSARG00000009047PATL27635.533Sorex_araneus
ENSBTAG00000005913PATL18096.429ENSSARG00000009600PATL18096.429Sorex_araneus
ENSBTAG00000005913PATL110081.865ENSSPUG00000009453PATL110081.088Sphenodon_punctatus
ENSBTAG00000005913PATL15452.758ENSSPAG00000003187patl19946.389Stegastes_partitus
ENSBTAG00000005913PATL16033.966ENSSPAG00000004784patl26234.272Stegastes_partitus
ENSBTAG00000005913PATL110096.368ENSSSCG00000013124PATL110096.368Sus_scrofa
ENSBTAG00000005913PATL19980.026ENSTGUG00000006222PATL110078.442Taeniopygia_guttata
ENSBTAG00000005913PATL15236.228ENSTGUG00000004619-9837.811Taeniopygia_guttata
ENSBTAG00000005913PATL19453.165ENSTRUG00000000709patl19944.676Takifugu_rubripes
ENSBTAG00000005913PATL16233.750ENSTRUG00000005647patl26233.750Takifugu_rubripes
ENSBTAG00000005913PATL19094.186ENSTBEG00000000796PATL19095.116Tupaia_belangeri
ENSBTAG00000005913PATL17297.436ENSTTRG00000009389PATL18497.436Tursiops_truncatus
ENSBTAG00000005913PATL16233.608ENSUAMG00000018533PATL27134.541Ursus_americanus
ENSBTAG00000005913PATL19995.658ENSUMAG00000018634PATL110095.833Ursus_maritimus
ENSBTAG00000005913PATL16334.156ENSUMAG00000007738PATL27134.783Ursus_maritimus
ENSBTAG00000005913PATL16396.364ENSVPAG00000009224PATL17496.364Vicugna_pacos
ENSBTAG00000005913PATL19995.698ENSVVUG00000016668PATL110095.690Vulpes_vulpes
ENSBTAG00000005913PATL16434.004ENSVVUG00000011576PATL27235.266Vulpes_vulpes
ENSBTAG00000005913PATL15337.198ENSXETG00000014167patl27534.747Xenopus_tropicalis
ENSBTAG00000005913PATL16161.404ENSXCOG00000010808patl19763.462Xiphophorus_couchianus
ENSBTAG00000005913PATL15553.318ENSXMAG00000013834patl18456.164Xiphophorus_maculatus

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