EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSBTAG00000006034 (Gene tree)
Gene ID
493640
Gene Symbol
RNF113A
Alias
ZNF183
Full Name
Bos taurus ring finger protein 113A (RNF113A)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Minus strand
Length
1280 bases
Position
chrX:4219166-4220445
Accession
NM_001007807
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000007927zf-CCCHPF00642.241.3e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000007927-1280-ENSBTAP00000007927343 (aa)XP_024843561A0A140T863
Gene Model
Click here to download ENSBTAG00000006034's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006034's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000006034RNF113A10083.523ENSBTAG00000008684-10084.375
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000006034RNF113A9570.821ENSG00000139797RNF113B9970.821Homo_sapiens
ENSBTAG00000006034RNF113A10092.420ENSG00000125352RNF113A10092.420Homo_sapiens
ENSBTAG00000006034RNF113A9072.492ENSAPOG00000017510rnf113a9370.874Acanthochromis_polyacanthus
ENSBTAG00000006034RNF113A10091.977ENSAMEG00000019845-10091.691Ailuropoda_melanoleuca
ENSBTAG00000006034RNF113A9464.087ENSACIG00000007458rnf113a9760.991Amphilophus_citrinellus
ENSBTAG00000006034RNF113A9072.816ENSAOCG00000003485rnf113a9371.197Amphiprion_ocellaris
ENSBTAG00000006034RNF113A9072.816ENSAPEG00000001084rnf113a9371.197Amphiprion_percula
ENSBTAG00000006034RNF113A9470.588ENSATEG00000022950rnf113a9769.969Anabas_testudineus
ENSBTAG00000006034RNF113A7583.658ENSAPLG00000012510-8589.956Anas_platyrhynchos
ENSBTAG00000006034RNF113A8779.000ENSACAG00000012485-9478.667Anolis_carolinensis
ENSBTAG00000006034RNF113A10090.962ENSANAG00000013925-10090.087Aotus_nancymaae
ENSBTAG00000006034RNF113A9470.732ENSANAG00000020431RNF113B9970.122Aotus_nancymaae
ENSBTAG00000006034RNF113A9392.453ENSANAG00000024332-9592.453Aotus_nancymaae
ENSBTAG00000006034RNF113A9471.207ENSACLG00000025256rnf113a9769.876Astatotilapia_calliptera
ENSBTAG00000006034RNF113A9370.846ENSAMXG00000011273rnf113a9768.652Astyanax_mexicanus
ENSBTAG00000006034RNF113A8844.262WBGene00010476rnf-1138243.210Caenorhabditis_elegans
ENSBTAG00000006034RNF113A10091.545ENSCJAG00000022327RNF113A10091.545Callithrix_jacchus
ENSBTAG00000006034RNF113A9471.865ENSCJAG00000004501RNF113B9971.646Callithrix_jacchus
ENSBTAG00000006034RNF113A10093.678ENSCAFG00000018430-10094.253Canis_familiaris
ENSBTAG00000006034RNF113A10075.429ENSCAFG00000018373-10076.857Canis_familiaris
ENSBTAG00000006034RNF113A10075.714ENSCAFG00020020280-10077.143Canis_lupus_dingo
ENSBTAG00000006034RNF113A10093.678ENSCAFG00020004044-10094.253Canis_lupus_dingo
ENSBTAG00000006034RNF113A10084.840ENSCHIG00000015616-10083.673Capra_hircus
ENSBTAG00000006034RNF113A10099.417ENSCHIG00000018820-10099.417Capra_hircus
ENSBTAG00000006034RNF113A10092.151ENSTSYG00000001308RNF113A10092.733Carlito_syrichta
ENSBTAG00000006034RNF113A9888.358ENSCPOG00000038517-9988.358Cavia_porcellus
ENSBTAG00000006034RNF113A10091.545ENSCCAG00000013617RNF113A10091.545Cebus_capucinus
ENSBTAG00000006034RNF113A9472.477ENSCCAG00000021327RNF113B9972.256Cebus_capucinus
ENSBTAG00000006034RNF113A10093.314ENSCATG00000002702RNF113A10093.314Cercocebus_atys
ENSBTAG00000006034RNF113A10090.435ENSCLAG00000017479-10090.145Chinchilla_lanigera
ENSBTAG00000006034RNF113A10077.326ENSCSAG00000019472-10077.681Chlorocebus_sabaeus
ENSBTAG00000006034RNF113A10068.786ENSCSAG00000000222RNF113B10069.164Chlorocebus_sabaeus
ENSBTAG00000006034RNF113A7889.179ENSCHOG00000008711-10089.179Choloepus_hoffmanni
ENSBTAG00000006034RNF113A9181.672ENSCPBG00000026980-9580.064Chrysemys_picta_bellii
ENSBTAG00000006034RNF113A8763.907ENSCING00000009197-9263.455Ciona_intestinalis
ENSBTAG00000006034RNF113A6573.214ENSCSAVG00000006210-8963.014Ciona_savignyi
ENSBTAG00000006034RNF113A10093.294ENSCANG00000037715RNF113A10093.294Colobus_angolensis_palliatus
ENSBTAG00000006034RNF113A9469.753ENSCANG00000041552RNF113B9970.154Colobus_angolensis_palliatus
ENSBTAG00000006034RNF113A9987.427ENSCGRG00001002251Rnf113a19986.880Cricetulus_griseus_chok1gshd
ENSBTAG00000006034RNF113A9987.135ENSCGRG00000019441Rnf113a19986.589Cricetulus_griseus_crigri
ENSBTAG00000006034RNF113A9888.095ENSCGRG00000016675Rnf113a29988.095Cricetulus_griseus_crigri
ENSBTAG00000006034RNF113A9469.040ENSCSEG00000021570rnf113a8368.421Cynoglossus_semilaevis
ENSBTAG00000006034RNF113A9470.679ENSCVAG00000011305rnf113a9769.969Cyprinodon_variegatus
ENSBTAG00000006034RNF113A9471.914ENSDARG00000037930rnf113a9769.753Danio_rerio
ENSBTAG00000006034RNF113A9885.119ENSDORG00000027624Rnf113a29985.119Dipodomys_ordii
ENSBTAG00000006034RNF113A8858.199FBgn0038772mdlc8757.692Drosophila_melanogaster
ENSBTAG00000006034RNF113A10088.921ENSETEG00000018346-10088.630Echinops_telfairi
ENSBTAG00000006034RNF113A9367.485ENSEBUG00000016079rnf113a9765.231Eptatretus_burgeri
ENSBTAG00000006034RNF113A10090.407ENSEASG00005010538-10090.407Equus_asinus_asinus
ENSBTAG00000006034RNF113A10093.314ENSECAG00000003934-10093.314Equus_caballus
ENSBTAG00000006034RNF113A9390.966ENSECAG00000004638-10090.966Equus_caballus
ENSBTAG00000006034RNF113A9470.807ENSELUG00000020657rnf113a9769.255Esox_lucius
ENSBTAG00000006034RNF113A10094.477ENSFCAG00000025700-10093.895Felis_catus
ENSBTAG00000006034RNF113A10093.895ENSFCAG00000024392-9793.314Felis_catus
ENSBTAG00000006034RNF113A10087.896ENSFCAG00000028962-10088.761Felis_catus
ENSBTAG00000006034RNF113A8181.004ENSFALG00000004633-9378.947Ficedula_albicollis
ENSBTAG00000006034RNF113A9071.197ENSFHEG00000023305rnf113a9370.227Fundulus_heteroclitus
ENSBTAG00000006034RNF113A9069.279ENSGMOG00000004541rnf113a9465.831Gadus_morhua
ENSBTAG00000006034RNF113A9575.767ENSGALG00000000538RNF113A9874.540Gallus_gallus
ENSBTAG00000006034RNF113A9072.903ENSGAFG00000011863rnf113a9769.753Gambusia_affinis
ENSBTAG00000006034RNF113A9467.372ENSGACG00000009738rnf113a9764.848Gasterosteus_aculeatus
ENSBTAG00000006034RNF113A9181.029ENSGAGG00000020490-9579.100Gopherus_agassizii
ENSBTAG00000006034RNF113A10092.420ENSGGOG00000002324RNF113A10092.420Gorilla_gorilla
ENSBTAG00000006034RNF113A9571.125ENSGGOG00000023052RNF113B9971.125Gorilla_gorilla
ENSBTAG00000006034RNF113A9470.898ENSHBUG00000008626rnf113a9769.565Haplochromis_burtoni
ENSBTAG00000006034RNF113A10089.504ENSHGLG00000019571-10089.504Heterocephalus_glaber_female
ENSBTAG00000006034RNF113A10088.761ENSHGLG00100019582-10088.761Heterocephalus_glaber_male
ENSBTAG00000006034RNF113A9070.227ENSHCOG00000003421rnf113a9766.358Hippocampus_comes
ENSBTAG00000006034RNF113A9272.293ENSIPUG00000013431RNF113A9470.645Ictalurus_punctatus
ENSBTAG00000006034RNF113A10091.860ENSSTOG00000019866-10091.279Ictidomys_tridecemlineatus
ENSBTAG00000006034RNF113A7465.759ENSJJAG00000019849Rnf113a17968.182Jaculus_jaculus
ENSBTAG00000006034RNF113A9471.118ENSKMAG00000009830rnf113a9770.807Kryptolebias_marmoratus
ENSBTAG00000006034RNF113A9470.279ENSLBEG00000004627rnf113a9769.350Labrus_bergylta
ENSBTAG00000006034RNF113A9375.157ENSLACG00000013178rnf113a9672.642Latimeria_chalumnae
ENSBTAG00000006034RNF113A9670.606ENSLOCG00000011785rnf113a9969.697Lepisosteus_oculatus
ENSBTAG00000006034RNF113A9990.962ENSLAFG00000013906-9990.671Loxodonta_africana
ENSBTAG00000006034RNF113A10093.314ENSMFAG00000018472RNF113A10093.314Macaca_fascicularis
ENSBTAG00000006034RNF113A10093.314ENSMMUG00000020223RNF113A10093.314Macaca_mulatta
ENSBTAG00000006034RNF113A10093.314ENSMNEG00000019778RNF113A10093.314Macaca_nemestrina
ENSBTAG00000006034RNF113A10093.314ENSMLEG00000020750RNF113A10093.314Mandrillus_leucophaeus
ENSBTAG00000006034RNF113A7874.627ENSMLEG00000038757RNF113B8974.627Mandrillus_leucophaeus
ENSBTAG00000006034RNF113A9468.731ENSMAMG00000021895rnf113a9768.731Mastacembelus_armatus
ENSBTAG00000006034RNF113A9471.207ENSMZEG00005023086rnf113a9769.876Maylandia_zebra
ENSBTAG00000006034RNF113A8678.983ENSMGAG00000001753-9878.893Meleagris_gallopavo
ENSBTAG00000006034RNF113A9588.685ENSMICG00000038084-9588.379Microcebus_murinus
ENSBTAG00000006034RNF113A10092.174ENSMICG00000001750-10092.464Microcebus_murinus
ENSBTAG00000006034RNF113A9887.240ENSMOCG00000005370-9686.647Microtus_ochrogaster
ENSBTAG00000006034RNF113A9071.197ENSMMOG00000016954rnf113a9468.932Mola_mola
ENSBTAG00000006034RNF113A9464.087ENSMALG00000007938rnf113a9762.539Monopterus_albus
ENSBTAG00000006034RNF113A9889.881MGP_CAROLIEiJ_G0017943Rnf113a29989.881Mus_caroli
ENSBTAG00000006034RNF113A9987.427ENSMUSG00000036537Rnf113a19987.135Mus_musculus
ENSBTAG00000006034RNF113A9889.881ENSMUSG00000098134Rnf113a29989.881Mus_musculus
ENSBTAG00000006034RNF113A9890.476MGP_PahariEiJ_G0029702Rnf113a29990.476Mus_pahari
ENSBTAG00000006034RNF113A9987.353MGP_PahariEiJ_G0031547Rnf113a19987.059Mus_pahari
ENSBTAG00000006034RNF113A9987.719MGP_SPRETEiJ_G0034156Rnf113a19987.427Mus_spretus
ENSBTAG00000006034RNF113A9889.881MGP_SPRETEiJ_G0018788Rnf113a29989.881Mus_spretus
ENSBTAG00000006034RNF113A10091.643ENSMPUG00000019358-10091.643Mustela_putorius_furo
ENSBTAG00000006034RNF113A10084.393ENSMLUG00000010856-10084.104Myotis_lucifugus
ENSBTAG00000006034RNF113A10087.931ENSMLUG00000016812-10087.356Myotis_lucifugus
ENSBTAG00000006034RNF113A9471.207ENSNBRG00000004314rnf113a9769.876Neolamprologus_brichardi
ENSBTAG00000006034RNF113A10092.128ENSNLEG00000018333RNF113A10092.128Nomascus_leucogenys
ENSBTAG00000006034RNF113A9470.336ENSNLEG00000007844RNF113B9970.091Nomascus_leucogenys
ENSBTAG00000006034RNF113A9677.844ENSMEUG00000001855-9878.659Notamacropus_eugenii
ENSBTAG00000006034RNF113A9470.497ENSONIG00000000741rnf113a9769.565Oreochromis_niloticus
ENSBTAG00000006034RNF113A9874.852ENSOANG00000002592-9974.260Ornithorhynchus_anatinus
ENSBTAG00000006034RNF113A10091.279ENSOCUG00000016207-10091.570Oryctolagus_cuniculus
ENSBTAG00000006034RNF113A9171.795ENSORLG00000002442rnf113a9570.192Oryzias_latipes
ENSBTAG00000006034RNF113A9171.474ENSORLG00020011512rnf113a9569.872Oryzias_latipes_hni
ENSBTAG00000006034RNF113A9171.795ENSORLG00015004382rnf113a9570.192Oryzias_latipes_hsok
ENSBTAG00000006034RNF113A9471.517ENSOMEG00000020197rnf113a9769.969Oryzias_melastigma
ENSBTAG00000006034RNF113A10090.407ENSOGAG00000031602RNF113A10090.116Otolemur_garnettii
ENSBTAG00000006034RNF113A10088.047ENSOGAG00000011638RNF113B10086.297Otolemur_garnettii
ENSBTAG00000006034RNF113A10099.417ENSOARG00000009771-10099.417Ovis_aries
ENSBTAG00000006034RNF113A10083.908ENSOARG00000015294-10085.057Ovis_aries
ENSBTAG00000006034RNF113A10092.128ENSPPAG00000009537RNF113A10092.128Pan_paniscus
ENSBTAG00000006034RNF113A9571.733ENSPPAG00000040641RNF113B9971.733Pan_paniscus
ENSBTAG00000006034RNF113A10088.728ENSPPRG00000020640-10089.595Panthera_pardus
ENSBTAG00000006034RNF113A10094.477ENSPPRG00000011512-10093.895Panthera_pardus
ENSBTAG00000006034RNF113A10094.477ENSPTIG00000007986-10093.895Panthera_tigris_altaica
ENSBTAG00000006034RNF113A9571.733ENSPTRG00000005987RNF113B9971.733Pan_troglodytes
ENSBTAG00000006034RNF113A10092.128ENSPTRG00000022231RNF113A10092.128Pan_troglodytes
ENSBTAG00000006034RNF113A10093.314ENSPANG00000011522RNF113A10093.314Papio_anubis
ENSBTAG00000006034RNF113A9472.360ENSPKIG00000016796rnf113a9770.497Paramormyrops_kingsleyae
ENSBTAG00000006034RNF113A8283.688ENSPSIG00000012676-9383.212Pelodiscus_sinensis
ENSBTAG00000006034RNF113A9072.816ENSPMGG00000009668rnf113a9371.197Periophthalmus_magnuspinnatus
ENSBTAG00000006034RNF113A10088.696ENSPEMG00000002490Rnf113a19988.338Peromyscus_maniculatus_bairdii
ENSBTAG00000006034RNF113A8769.360ENSPMAG00000005184rnf113a9568.621Petromyzon_marinus
ENSBTAG00000006034RNF113A9976.369ENSPCIG00000028916-9976.369Phascolarctos_cinereus
ENSBTAG00000006034RNF113A9072.903ENSPFOG00000014248rnf113a9371.845Poecilia_formosa
ENSBTAG00000006034RNF113A9470.769ENSPLAG00000010435rnf113a9769.753Poecilia_latipinna
ENSBTAG00000006034RNF113A9073.548ENSPMEG00000010641rnf113a9372.492Poecilia_mexicana
ENSBTAG00000006034RNF113A9073.548ENSPREG00000009900rnf113a9372.492Poecilia_reticulata
ENSBTAG00000006034RNF113A10092.128ENSPPYG00000020676RNF113A10092.128Pongo_abelii
ENSBTAG00000006034RNF113A9572.256ENSPPYG00000005460RNF113B10072.644Pongo_abelii
ENSBTAG00000006034RNF113A10089.504ENSPCAG00000014633-9989.504Procavia_capensis
ENSBTAG00000006034RNF113A9687.048ENSPCOG00000005671-9587.349Propithecus_coquereli
ENSBTAG00000006034RNF113A9471.207ENSPNYG00000013863rnf113a9769.876Pundamilia_nyererei
ENSBTAG00000006034RNF113A9769.069ENSPNAG00000017428rnf113a10066.967Pygocentrus_nattereri
ENSBTAG00000006034RNF113A9988.012ENSRNOG00000059412Rnf113a19987.719Rattus_norvegicus
ENSBTAG00000006034RNF113A9988.012ENSRNOG00000034040LOC1083480799987.719Rattus_norvegicus
ENSBTAG00000006034RNF113A9470.031ENSRBIG00000036094RNF113B9970.427Rhinopithecus_bieti
ENSBTAG00000006034RNF113A10093.294ENSRBIG00000017389RNF113A10093.294Rhinopithecus_bieti
ENSBTAG00000006034RNF113A9470.031ENSRROG00000045661RNF113B9970.427Rhinopithecus_roxellana
ENSBTAG00000006034RNF113A10093.294ENSRROG00000012149RNF113A10093.294Rhinopithecus_roxellana
ENSBTAG00000006034RNF113A9472.171ENSSBOG00000029719RNF113B9971.733Saimiri_boliviensis_boliviensis
ENSBTAG00000006034RNF113A10091.837ENSSBOG00000017704RNF113A10091.837Saimiri_boliviensis_boliviensis
ENSBTAG00000006034RNF113A10075.568ENSSHAG00000008839-10075.568Sarcophilus_harrisii
ENSBTAG00000006034RNF113A9371.562ENSSFOG00015016567rnf113a9569.375Scleropages_formosus
ENSBTAG00000006034RNF113A9070.874ENSSMAG00000009235rnf113a9370.227Scophthalmus_maximus
ENSBTAG00000006034RNF113A9469.969ENSSDUG00000022244rnf113a9768.421Seriola_dumerili
ENSBTAG00000006034RNF113A9469.969ENSSLDG00000018582rnf113a9768.421Seriola_lalandi_dorsalis
ENSBTAG00000006034RNF113A10089.213ENSSARG00000010436-10089.213Sorex_araneus
ENSBTAG00000006034RNF113A9179.743ENSSPUG00000018786-8578.135Sphenodon_punctatus
ENSBTAG00000006034RNF113A9470.588ENSSPAG00000013187rnf113a9769.040Stegastes_partitus
ENSBTAG00000006034RNF113A10093.023ENSSSCG00000032973-10093.605Sus_scrofa
ENSBTAG00000006034RNF113A9576.380ENSTGUG00000001947-9477.170Taeniopygia_guttata
ENSBTAG00000006034RNF113A9370.000ENSTRUG00000011142rnf113a9768.750Takifugu_rubripes
ENSBTAG00000006034RNF113A9270.476ENSTNIG00000014938rnf113a9568.889Tetraodon_nigroviridis
ENSBTAG00000006034RNF113A10091.279ENSTBEG00000012687-10091.860Tupaia_belangeri
ENSBTAG00000006034RNF113A9592.073ENSUAMG00000024564-9693.902Ursus_americanus
ENSBTAG00000006034RNF113A9691.541ENSUMAG00000002167-9993.353Ursus_maritimus
ENSBTAG00000006034RNF113A9088.746ENSVPAG00000004521-9987.460Vicugna_pacos
ENSBTAG00000006034RNF113A7168.952ENSVVUG00000004522-8371.371Vulpes_vulpes
ENSBTAG00000006034RNF113A10093.966ENSVVUG00000011662-10094.540Vulpes_vulpes
ENSBTAG00000006034RNF113A9671.515ENSXETG00000002042rnf113a9970.000Xenopus_tropicalis
ENSBTAG00000006034RNF113A9071.613ENSXCOG00000017542rnf113a9670.550Xiphophorus_couchianus
ENSBTAG00000006034RNF113A9073.226ENSXMAG00000008169rnf113a9372.168Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0004842ubiquitin-protein transferase activity-ISSFunction
GO:0006281DNA repair-IEAProcess
GO:0006397mRNA processing-IEAProcess
GO:0016567protein ubiquitination-ISSProcess
GO:0016607nuclear speck-IEAComponent
GO:0018276isopeptide cross-linking via N6-glycyl-L-lysine-ISSProcess
GO:0046872metal ion binding-IEAFunction
GO:0070100negative regulation of chemokine-mediated signaling pathway-ISSProcess

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