EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000006059 (Gene tree)
Gene ID: 509943
Gene Symbol: TSN
Alias: -
Full Name: Bos taurus translin (TSN)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 18232 bases
Position: chr2:73398067-73416298
Accession: NM_001075422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000059780	Translin	PF01997.16	3.8e-56	1	1
ENSBTAP00000007959	Translin	PF01997.16	1.2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000069948	-	2641	-	ENSBTAP00000059780	228 (aa)	-	UPI00004F406A
ENSBTAT00000007959	-	750	-	ENSBTAP00000007959	218 (aa)	-	Q08DM8

Gene Model

Click here to download ENSBTAG00000006059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000006059	TSN	100	99.561	ENSG00000211460	TSN	100	99.561	Homo_sapiens
ENSBTAG00000006059	TSN	98	78.571	ENSAPOG00000002063	tsn	99	78.571	Acanthochromis_polyacanthus
ENSBTAG00000006059	TSN	100	99.561	ENSAMEG00000005055	TSN	100	99.561	Ailuropoda_melanoleuca
ENSBTAG00000006059	TSN	98	79.911	ENSACIG00000021694	tsn	99	79.911	Amphilophus_citrinellus
ENSBTAG00000006059	TSN	98	78.571	ENSAOCG00000015574	tsn	99	80.198	Amphiprion_ocellaris
ENSBTAG00000006059	TSN	98	78.571	ENSAPEG00000001677	tsn	99	78.571	Amphiprion_percula
ENSBTAG00000006059	TSN	99	77.778	ENSATEG00000004115	tsn	99	77.778	Anabas_testudineus
ENSBTAG00000006059	TSN	94	84.475	ENSACAG00000004757	TSN	99	84.475	Anolis_carolinensis
ENSBTAG00000006059	TSN	100	99.123	ENSANAG00000026842	TSN	100	99.123	Aotus_nancymaae
ENSBTAG00000006059	TSN	98	79.911	ENSACLG00000020831	tsn	99	79.911	Astatotilapia_calliptera
ENSBTAG00000006059	TSN	98	77.679	ENSAMXG00000035417	tsn	99	77.679	Astyanax_mexicanus
ENSBTAG00000006059	TSN	100	99.123	ENSCJAG00000047222	-	100	99.123	Callithrix_jacchus
ENSBTAG00000006059	TSN	50	89.381	ENSCJAG00000008511	-	88	89.381	Callithrix_jacchus
ENSBTAG00000006059	TSN	100	98.684	ENSCJAG00000044533	-	100	98.684	Callithrix_jacchus
ENSBTAG00000006059	TSN	99	99.559	ENSCAFG00000004700	TSN	94	99.559	Canis_familiaris
ENSBTAG00000006059	TSN	100	99.561	ENSCAFG00020011747	TSN	100	99.561	Canis_lupus_dingo
ENSBTAG00000006059	TSN	100	100.000	ENSCHIG00000010715	TSN	100	100.000	Capra_hircus
ENSBTAG00000006059	TSN	100	98.684	ENSTSYG00000004395	TSN	100	98.684	Carlito_syrichta
ENSBTAG00000006059	TSN	94	81.068	ENSCAPG00000015595	TSN	81	81.068	Cavia_aperea
ENSBTAG00000006059	TSN	100	99.561	ENSCPOG00000035645	TSN	100	99.561	Cavia_porcellus
ENSBTAG00000006059	TSN	100	98.684	ENSCCAG00000026371	TSN	100	98.684	Cebus_capucinus
ENSBTAG00000006059	TSN	66	84.868	ENSCCAG00000034886	-	84	84.868	Cebus_capucinus
ENSBTAG00000006059	TSN	100	99.561	ENSCATG00000032155	TSN	100	99.561	Cercocebus_atys
ENSBTAG00000006059	TSN	100	99.561	ENSCLAG00000006171	TSN	100	99.561	Chinchilla_lanigera
ENSBTAG00000006059	TSN	100	99.561	ENSCSAG00000016712	TSN	100	99.561	Chlorocebus_sabaeus
ENSBTAG00000006059	TSN	97	76.126	ENSCPBG00000018116	-	97	76.126	Chrysemys_picta_bellii
ENSBTAG00000006059	TSN	66	87.417	ENSCPBG00000013741	-	80	87.417	Chrysemys_picta_bellii
ENSBTAG00000006059	TSN	95	45.161	ENSCING00000012612	-	99	45.161	Ciona_intestinalis
ENSBTAG00000006059	TSN	97	44.131	ENSCSAVG00000009485	-	99	43.498	Ciona_savignyi
ENSBTAG00000006059	TSN	100	99.561	ENSCANG00000041881	TSN	100	99.561	Colobus_angolensis_palliatus
ENSBTAG00000006059	TSN	100	98.684	ENSCGRG00001018233	Tsn	100	98.684	Cricetulus_griseus_chok1gshd
ENSBTAG00000006059	TSN	100	98.684	ENSCGRG00000008331	Tsn	100	98.684	Cricetulus_griseus_crigri
ENSBTAG00000006059	TSN	98	75.785	ENSCSEG00000005825	tsn	98	75.785	Cynoglossus_semilaevis
ENSBTAG00000006059	TSN	98	70.982	ENSCVAG00000022024	tsn	99	71.429	Cyprinodon_variegatus
ENSBTAG00000006059	TSN	98	79.911	ENSDARG00000041830	tsn	99	79.911	Danio_rerio
ENSBTAG00000006059	TSN	100	99.561	ENSDNOG00000025740	TSN	100	99.561	Dasypus_novemcinctus
ENSBTAG00000006059	TSN	100	99.123	ENSDORG00000026251	-	100	99.123	Dipodomys_ordii
ENSBTAG00000006059	TSN	95	52.778	FBgn0033528	trsn	91	52.778	Drosophila_melanogaster
ENSBTAG00000006059	TSN	100	100.000	ENSEASG00005004774	TSN	100	100.000	Equus_asinus_asinus
ENSBTAG00000006059	TSN	100	100.000	ENSECAG00000015930	TSN	100	100.000	Equus_caballus
ENSBTAG00000006059	TSN	80	99.425	ENSEEUG00000013935	TSN	100	99.425	Erinaceus_europaeus
ENSBTAG00000006059	TSN	98	80.269	ENSELUG00000007669	tsn	98	80.269	Esox_lucius
ENSBTAG00000006059	TSN	100	99.561	ENSFCAG00000027149	TSN	100	99.561	Felis_catus
ENSBTAG00000006059	TSN	78	74.706	ENSFCAG00000022306	-	96	74.706	Felis_catus
ENSBTAG00000006059	TSN	95	86.124	ENSFALG00000013247	TSN	96	83.258	Ficedula_albicollis
ENSBTAG00000006059	TSN	100	99.561	ENSFDAG00000012302	TSN	100	99.561	Fukomys_damarensis
ENSBTAG00000006059	TSN	98	79.018	ENSFHEG00000015531	tsn	99	79.018	Fundulus_heteroclitus
ENSBTAG00000006059	TSN	98	77.232	ENSGMOG00000009247	tsn	99	77.232	Gadus_morhua
ENSBTAG00000006059	TSN	100	86.026	ENSGALG00000011652	TSN	100	86.026	Gallus_gallus
ENSBTAG00000006059	TSN	98	79.018	ENSGAFG00000003816	tsn	99	79.018	Gambusia_affinis
ENSBTAG00000006059	TSN	97	77.928	ENSGACG00000000235	tsn	97	77.928	Gasterosteus_aculeatus
ENSBTAG00000006059	TSN	100	99.561	ENSGGOG00000002216	TSN	100	99.561	Gorilla_gorilla
ENSBTAG00000006059	TSN	98	79.018	ENSHBUG00000002340	tsn	84	79.018	Haplochromis_burtoni
ENSBTAG00000006059	TSN	100	99.561	ENSHGLG00000007038	TSN	100	99.561	Heterocephalus_glaber_female
ENSBTAG00000006059	TSN	100	99.561	ENSHGLG00100000069	TSN	100	99.561	Heterocephalus_glaber_male
ENSBTAG00000006059	TSN	98	78.475	ENSHCOG00000001756	tsn	99	78.475	Hippocampus_comes
ENSBTAG00000006059	TSN	98	79.464	ENSIPUG00000021370	tsn	99	79.464	Ictalurus_punctatus
ENSBTAG00000006059	TSN	100	99.561	ENSSTOG00000000972	TSN	100	99.561	Ictidomys_tridecemlineatus
ENSBTAG00000006059	TSN	100	98.684	ENSJJAG00000006730	Tsn	100	98.684	Jaculus_jaculus
ENSBTAG00000006059	TSN	98	79.464	ENSKMAG00000004996	tsn	99	79.464	Kryptolebias_marmoratus
ENSBTAG00000006059	TSN	100	78.509	ENSLBEG00000012620	tsn	100	78.509	Labrus_bergylta
ENSBTAG00000006059	TSN	98	59.471	ENSLACG00000005246	TSN	99	59.471	Latimeria_chalumnae
ENSBTAG00000006059	TSN	98	79.464	ENSLOCG00000002191	tsn	97	79.464	Lepisosteus_oculatus
ENSBTAG00000006059	TSN	100	91.775	ENSLAFG00000032428	TSN	100	91.775	Loxodonta_africana
ENSBTAG00000006059	TSN	100	99.561	ENSMFAG00000044217	TSN	100	99.561	Macaca_fascicularis
ENSBTAG00000006059	TSN	100	99.561	ENSMMUG00000021119	TSN	100	99.561	Macaca_mulatta
ENSBTAG00000006059	TSN	100	99.561	ENSMNEG00000040632	TSN	100	99.561	Macaca_nemestrina
ENSBTAG00000006059	TSN	54	99.194	ENSMLEG00000038656	TSN	96	99.194	Mandrillus_leucophaeus
ENSBTAG00000006059	TSN	98	79.018	ENSMAMG00000019536	tsn	99	79.018	Mastacembelus_armatus
ENSBTAG00000006059	TSN	98	79.911	ENSMZEG00005018715	tsn	84	79.911	Maylandia_zebra
ENSBTAG00000006059	TSN	79	85.549	ENSMGAG00000011956	TSN	88	86.047	Meleagris_gallopavo
ENSBTAG00000006059	TSN	94	98.058	ENSMAUG00000018800	Tsn	100	98.058	Mesocricetus_auratus
ENSBTAG00000006059	TSN	100	99.561	ENSMICG00000015793	TSN	100	99.561	Microcebus_murinus
ENSBTAG00000006059	TSN	100	97.807	ENSMOCG00000013248	Tsn	100	97.807	Microtus_ochrogaster
ENSBTAG00000006059	TSN	93	78.713	ENSMMOG00000019661	tsn	99	78.713	Mola_mola
ENSBTAG00000006059	TSN	100	92.576	ENSMODG00000000147	TSN	100	92.576	Monodelphis_domestica
ENSBTAG00000006059	TSN	98	79.018	ENSMALG00000001827	tsn	99	79.018	Monopterus_albus
ENSBTAG00000006059	TSN	100	98.246	ENSMUSG00000026374	Tsn	100	98.246	Mus_musculus
ENSBTAG00000006059	TSN	100	98.246	MGP_PahariEiJ_G0027742	Tsn	100	98.246	Mus_pahari
ENSBTAG00000006059	TSN	100	98.246	MGP_SPRETEiJ_G0015313	Tsn	100	98.246	Mus_spretus
ENSBTAG00000006059	TSN	100	99.561	ENSMPUG00000001056	TSN	100	99.561	Mustela_putorius_furo
ENSBTAG00000006059	TSN	94	99.515	ENSMLUG00000012656	TSN	100	99.515	Myotis_lucifugus
ENSBTAG00000006059	TSN	56	30.496	ENSMLUG00000028551	-	83	30.496	Myotis_lucifugus
ENSBTAG00000006059	TSN	100	98.684	ENSNGAG00000010353	Tsn	100	98.684	Nannospalax_galili
ENSBTAG00000006059	TSN	98	79.464	ENSNBRG00000001193	tsn	99	79.464	Neolamprologus_brichardi
ENSBTAG00000006059	TSN	100	99.561	ENSNLEG00000032773	TSN	100	99.561	Nomascus_leucogenys
ENSBTAG00000006059	TSN	100	72.368	ENSMEUG00000006228	TSN	100	72.368	Notamacropus_eugenii
ENSBTAG00000006059	TSN	64	77.698	ENSOPRG00000004858	-	99	77.698	Ochotona_princeps
ENSBTAG00000006059	TSN	100	99.561	ENSODEG00000008386	-	100	99.561	Octodon_degus
ENSBTAG00000006059	TSN	100	80.702	ENSODEG00000005998	-	100	80.702	Octodon_degus
ENSBTAG00000006059	TSN	98	79.911	ENSONIG00000017060	tsn	99	79.911	Oreochromis_niloticus
ENSBTAG00000006059	TSN	95	93.720	ENSOANG00000003457	TSN	100	93.720	Ornithorhynchus_anatinus
ENSBTAG00000006059	TSN	100	99.123	ENSOCUG00000023529	TSN	100	99.123	Oryctolagus_cuniculus
ENSBTAG00000006059	TSN	98	79.464	ENSORLG00000010049	tsn	99	79.464	Oryzias_latipes
ENSBTAG00000006059	TSN	63	75.000	ENSORLG00020017000	-	84	75.000	Oryzias_latipes_hni
ENSBTAG00000006059	TSN	98	79.018	ENSORLG00020016476	tsn	99	79.018	Oryzias_latipes_hni
ENSBTAG00000006059	TSN	98	79.018	ENSORLG00015019192	tsn	99	79.018	Oryzias_latipes_hsok
ENSBTAG00000006059	TSN	98	79.464	ENSOMEG00000016335	tsn	99	79.464	Oryzias_melastigma
ENSBTAG00000006059	TSN	100	99.561	ENSOGAG00000030436	TSN	100	99.561	Otolemur_garnettii
ENSBTAG00000006059	TSN	100	100.000	ENSOARG00000013339	TSN	100	100.000	Ovis_aries
ENSBTAG00000006059	TSN	100	99.561	ENSPPAG00000032878	TSN	100	99.561	Pan_paniscus
ENSBTAG00000006059	TSN	96	65.909	ENSPPRG00000004174	-	94	65.909	Panthera_pardus
ENSBTAG00000006059	TSN	100	99.561	ENSPPRG00000006531	TSN	99	99.561	Panthera_pardus
ENSBTAG00000006059	TSN	55	95.238	ENSPTIG00000012953	TSN	88	92.366	Panthera_tigris_altaica
ENSBTAG00000006059	TSN	100	99.561	ENSPTRG00000012420	TSN	100	99.561	Pan_troglodytes
ENSBTAG00000006059	TSN	100	99.561	ENSPANG00000000733	TSN	100	99.561	Papio_anubis
ENSBTAG00000006059	TSN	98	78.571	ENSPKIG00000002005	tsn	99	78.571	Paramormyrops_kingsleyae
ENSBTAG00000006059	TSN	80	88.000	ENSPSIG00000006064	TSN	96	88.000	Pelodiscus_sinensis
ENSBTAG00000006059	TSN	96	79.545	ENSPMGG00000015287	tsn	97	79.545	Periophthalmus_magnuspinnatus
ENSBTAG00000006059	TSN	97	66.968	ENSPMAG00000009161	tsn	95	66.968	Petromyzon_marinus
ENSBTAG00000006059	TSN	96	94.286	ENSPCIG00000023491	TSN	100	95.146	Phascolarctos_cinereus
ENSBTAG00000006059	TSN	98	79.464	ENSPFOG00000016063	tsn	99	79.464	Poecilia_formosa
ENSBTAG00000006059	TSN	98	79.464	ENSPLAG00000010654	tsn	99	79.464	Poecilia_latipinna
ENSBTAG00000006059	TSN	98	79.018	ENSPMEG00000023570	tsn	99	79.018	Poecilia_mexicana
ENSBTAG00000006059	TSN	98	79.018	ENSPREG00000003481	tsn	99	79.018	Poecilia_reticulata
ENSBTAG00000006059	TSN	100	99.561	ENSPPYG00000012774	TSN	100	99.561	Pongo_abelii
ENSBTAG00000006059	TSN	80	98.276	ENSPCAG00000003549	TSN	100	98.276	Procavia_capensis
ENSBTAG00000006059	TSN	100	99.561	ENSPCOG00000011045	TSN	100	99.561	Propithecus_coquereli
ENSBTAG00000006059	TSN	100	100.000	ENSPVAG00000016702	TSN	100	100.000	Pteropus_vampyrus
ENSBTAG00000006059	TSN	98	79.911	ENSPNYG00000012396	tsn	84	79.911	Pundamilia_nyererei
ENSBTAG00000006059	TSN	98	78.571	ENSPNAG00000018140	tsn	99	78.571	Pygocentrus_nattereri
ENSBTAG00000006059	TSN	100	98.684	ENSRNOG00000002319	Tsn	100	98.684	Rattus_norvegicus
ENSBTAG00000006059	TSN	100	99.561	ENSRBIG00000041316	TSN	100	99.561	Rhinopithecus_bieti
ENSBTAG00000006059	TSN	100	99.561	ENSRROG00000029954	TSN	100	99.561	Rhinopithecus_roxellana
ENSBTAG00000006059	TSN	82	80.749	ENSSBOG00000015719	-	83	94.040	Saimiri_boliviensis_boliviensis
ENSBTAG00000006059	TSN	100	99.123	ENSSBOG00000028579	TSN	100	99.123	Saimiri_boliviensis_boliviensis
ENSBTAG00000006059	TSN	100	95.614	ENSSHAG00000011707	TSN	100	95.614	Sarcophilus_harrisii
ENSBTAG00000006059	TSN	98	78.475	ENSSFOG00015020668	tsn	98	78.475	Scleropages_formosus
ENSBTAG00000006059	TSN	98	78.571	ENSSMAG00000005822	tsn	99	78.571	Scophthalmus_maximus
ENSBTAG00000006059	TSN	98	78.571	ENSSDUG00000011388	tsn	99	78.571	Seriola_dumerili
ENSBTAG00000006059	TSN	98	78.571	ENSSLDG00000008206	tsn	99	78.571	Seriola_lalandi_dorsalis
ENSBTAG00000006059	TSN	100	66.667	ENSSARG00000007193	-	100	66.667	Sorex_araneus
ENSBTAG00000006059	TSN	100	85.526	ENSSPUG00000017518	TSN	100	85.526	Sphenodon_punctatus
ENSBTAG00000006059	TSN	96	80.000	ENSSPAG00000009283	tsn	97	80.000	Stegastes_partitus
ENSBTAG00000006059	TSN	100	98.684	ENSSSCG00000015729	TSN	100	98.684	Sus_scrofa
ENSBTAG00000006059	TSN	99	84.444	ENSTGUG00000004445	TSN	98	84.444	Taeniopygia_guttata
ENSBTAG00000006059	TSN	97	77.828	ENSTRUG00000013691	tsn	98	77.828	Takifugu_rubripes
ENSBTAG00000006059	TSN	97	77.376	ENSTNIG00000015707	tsn	97	77.376	Tetraodon_nigroviridis
ENSBTAG00000006059	TSN	100	98.684	ENSTBEG00000015319	TSN	100	98.684	Tupaia_belangeri
ENSBTAG00000006059	TSN	100	100.000	ENSTTRG00000005854	TSN	100	100.000	Tursiops_truncatus
ENSBTAG00000006059	TSN	100	99.561	ENSUAMG00000021618	TSN	100	99.561	Ursus_americanus
ENSBTAG00000006059	TSN	100	98.246	ENSUMAG00000008516	TSN	100	98.246	Ursus_maritimus
ENSBTAG00000006059	TSN	59	73.643	ENSVPAG00000009874	-	100	73.643	Vicugna_pacos
ENSBTAG00000006059	TSN	97	98.113	ENSVVUG00000027555	TSN	99	99.515	Vulpes_vulpes
ENSBTAG00000006059	TSN	99	77.778	ENSXETG00000000838	tsn	99	77.778	Xenopus_tropicalis
ENSBTAG00000006059	TSN	54	75.000	ENSXCOG00000018514	tsn	95	75.000	Xiphophorus_couchianus
ENSBTAG00000006059	TSN	98	79.464	ENSXMAG00000022538	tsn	99	79.464	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process