EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSBTAG00000006280 (Gene tree)
Gene ID
511773
Gene Symbol
RBFOX3
Alias
-
Full Name
Bos taurus RNA binding fox-1 homolog 3 (RBFOX3)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
328994 bases
Position
chr19:53005648-53334641
Accession
NM_001075537
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000008241Fox-1_CPF12414.85e-4111
ENSBTAP00000008240Fox-1_CPF12414.81.9e-3811
ENSBTAP00000008240RRM_1PF00076.221.5e-1811
ENSBTAP00000008241RRM_1PF00076.229.6e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000008241-2326-ENSBTAP00000008241328 (aa)XP_005221252Q0VD23
ENSBTAT00000008240-1294-ENSBTAP00000008240370 (aa)-F1N700
Gene Model
Click here to download ENSBTAG00000006280's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006280's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000006280RBFOX310053.590ENSBTAG00000007210RBFOX17471.174
ENSBTAG00000006280RBFOX310047.420ENSBTAG00000020125RBFOX27561.034
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000006280RBFOX310097.561ENSG00000167281RBFOX310097.561Homo_sapiens
ENSBTAG00000006280RBFOX37789.583ENSAPOG00000015658-6393.103Acanthochromis_polyacanthus
ENSBTAG00000006280RBFOX310063.712ENSAPOG00000021630rbfox3b6981.961Acanthochromis_polyacanthus
ENSBTAG00000006280RBFOX37891.148ENSAMEG00000014170RBFOX37891.148Ailuropoda_melanoleuca
ENSBTAG00000006280RBFOX37876.817ENSACIG00000010817rbfox3b7980.753Amphilophus_citrinellus
ENSBTAG00000006280RBFOX37871.336ENSACIG00000003768-7174.031Amphilophus_citrinellus
ENSBTAG00000006280RBFOX37089.583ENSAOCG00000010786-6581.028Amphiprion_ocellaris
ENSBTAG00000006280RBFOX310063.712ENSAOCG00000012358rbfox3b6981.961Amphiprion_ocellaris
ENSBTAG00000006280RBFOX36679.435ENSAPEG00000019081rbfox3b7393.103Amphiprion_percula
ENSBTAG00000006280RBFOX37789.583ENSAPEG00000015891-7193.103Amphiprion_percula
ENSBTAG00000006280RBFOX39558.908ENSATEG00000023101-7877.647Anabas_testudineus
ENSBTAG00000006280RBFOX310064.365ENSATEG00000019945rbfox3b9561.207Anabas_testudineus
ENSBTAG00000006280RBFOX37888.581ENSACAG00000016093RBFOX37688.321Anolis_carolinensis
ENSBTAG00000006280RBFOX310096.646ENSANAG00000023457RBFOX39196.646Aotus_nancymaae
ENSBTAG00000006280RBFOX310068.072ENSACLG00000025552-8861.514Astatotilapia_calliptera
ENSBTAG00000006280RBFOX310063.712ENSACLG00000020011rbfox3b8780.364Astatotilapia_calliptera
ENSBTAG00000006280RBFOX310059.116ENSAMXG00000042841rbfox3b7277.255Astyanax_mexicanus
ENSBTAG00000006280RBFOX39567.398ENSAMXG00000037246rbfox3a7681.323Astyanax_mexicanus
ENSBTAG00000006280RBFOX310096.646ENSCJAG00000009563RBFOX310096.646Callithrix_jacchus
ENSBTAG00000006280RBFOX35899.061ENSCAFG00000005547RBFOX37699.061Canis_familiaris
ENSBTAG00000006280RBFOX310098.171ENSCAFG00020008126RBFOX38498.171Canis_lupus_dingo
ENSBTAG00000006280RBFOX310099.695ENSCHIG00000009124RBFOX39699.695Capra_hircus
ENSBTAG00000006280RBFOX310097.264ENSTSYG00000029617RBFOX310097.264Carlito_syrichta
ENSBTAG00000006280RBFOX310095.166ENSCPOG00000021703RBFOX310095.166Cavia_porcellus
ENSBTAG00000006280RBFOX310096.646ENSCCAG00000028450RBFOX310096.646Cebus_capucinus
ENSBTAG00000006280RBFOX39791.536ENSCATG00000018349RBFOX39296.864Cercocebus_atys
ENSBTAG00000006280RBFOX310096.353ENSCLAG00000006449RBFOX310096.353Chinchilla_lanigera
ENSBTAG00000006280RBFOX37897.213ENSCSAG00000002355RBFOX39297.213Chlorocebus_sabaeus
ENSBTAG00000006280RBFOX39567.151ENSCPBG00000010904RBFOX38189.683Chrysemys_picta_bellii
ENSBTAG00000006280RBFOX310097.866ENSCANG00000043120RBFOX39297.213Colobus_angolensis_palliatus
ENSBTAG00000006280RBFOX39792.212ENSCGRG00001019476Rbfox39793.146Cricetulus_griseus_chok1gshd
ENSBTAG00000006280RBFOX39792.212ENSCGRG00000003268Rbfox39793.146Cricetulus_griseus_crigri
ENSBTAG00000006280RBFOX310050.275ENSCSEG00000020606RBFOX37071.849Cynoglossus_semilaevis
ENSBTAG00000006280RBFOX38289.583ENSCSEG00000015567RBFOX37193.103Cynoglossus_semilaevis
ENSBTAG00000006280RBFOX310063.712ENSCVAG00000006882rbfox3b6981.961Cyprinodon_variegatus
ENSBTAG00000006280RBFOX310064.742ENSDARG00000074310rbfox3b9666.946Danio_rerio
ENSBTAG00000006280RBFOX39359.943ENSDARG00000010083rbfox3a7780.545Danio_rerio
ENSBTAG00000006280RBFOX38477.705ENSDNOG00000039391RBFOX38774.006Dasypus_novemcinctus
ENSBTAG00000006280RBFOX39579.553ENSDORG00000005352Rbfox39576.997Dipodomys_ordii
ENSBTAG00000006280RBFOX310054.667ENSEBUG00000002129RBFOX37475.197Eptatretus_burgeri
ENSBTAG00000006280RBFOX38649.671ENSEBUG00000013559RBFOX36268.000Eptatretus_burgeri
ENSBTAG00000006280RBFOX37896.540ENSEASG00005005059RBFOX39296.540Equus_asinus_asinus
ENSBTAG00000006280RBFOX37896.194ENSECAG00000023811RBFOX39296.194Equus_caballus
ENSBTAG00000006280RBFOX39771.510ENSEEUG00000013974RBFOX39472.080Erinaceus_europaeus
ENSBTAG00000006280RBFOX310069.486ENSELUG00000017963rbfox3b9564.873Esox_lucius
ENSBTAG00000006280RBFOX310094.512ENSFCAG00000002555RBFOX310094.512Felis_catus
ENSBTAG00000006280RBFOX39561.972ENSFALG00000012288RBFOX37571.711Ficedula_albicollis
ENSBTAG00000006280RBFOX39790.062ENSFDAG00000007489RBFOX39788.820Fukomys_damarensis
ENSBTAG00000006280RBFOX310069.697ENSFHEG00000008550rbfox3b9565.506Fundulus_heteroclitus
ENSBTAG00000006280RBFOX310055.096ENSGMOG00000019304-9556.646Gadus_morhua
ENSBTAG00000006280RBFOX39579.233ENSGALG00000032889RBFOX37692.647Gallus_gallus
ENSBTAG00000006280RBFOX39861.473ENSGAFG00000005025rbfox3b7380.784Gambusia_affinis
ENSBTAG00000006280RBFOX39562.857ENSGACG00000002138-9263.429Gasterosteus_aculeatus
ENSBTAG00000006280RBFOX39574.121ENSGAGG00000020025RBFOX38189.683Gopherus_agassizii
ENSBTAG00000006280RBFOX310097.561ENSGGOG00000012546RBFOX39697.561Gorilla_gorilla
ENSBTAG00000006280RBFOX310063.712ENSHBUG00000018099rbfox3b6981.176Haplochromis_burtoni
ENSBTAG00000006280RBFOX310058.245ENSHBUG00000023098-7380.392Haplochromis_burtoni
ENSBTAG00000006280RBFOX39794.444ENSHGLG00000008679RBFOX39793.210Heterocephalus_glaber_female
ENSBTAG00000006280RBFOX39789.198ENSHGLG00100014739RBFOX39480.282Heterocephalus_glaber_male
ENSBTAG00000006280RBFOX39657.803ENSHCOG00000007444RBFOX36582.400Hippocampus_comes
ENSBTAG00000006280RBFOX36478.423ENSHCOG00000001863RBFOX38089.655Hippocampus_comes
ENSBTAG00000006280RBFOX39565.517ENSIPUG00000012010rbfox3a7388.462Ictalurus_punctatus
ENSBTAG00000006280RBFOX310055.710ENSIPUG00000021966rbfox3b8876.371Ictalurus_punctatus
ENSBTAG00000006280RBFOX39792.105ENSSTOG00000026817RBFOX39792.105Ictidomys_tridecemlineatus
ENSBTAG00000006280RBFOX310096.341ENSJJAG00000014167Rbfox310096.341Jaculus_jaculus
ENSBTAG00000006280RBFOX310063.712ENSKMAG00000006726rbfox3b6981.961Kryptolebias_marmoratus
ENSBTAG00000006280RBFOX39570.032ENSLBEG00000022508-7675.824Labrus_bergylta
ENSBTAG00000006280RBFOX310063.435ENSLBEG00000004030rbfox3b7980.335Labrus_bergylta
ENSBTAG00000006280RBFOX39557.412ENSLACG00000018409-7175.000Latimeria_chalumnae
ENSBTAG00000006280RBFOX39364.012ENSLOCG00000012267rbfox3a7786.275Lepisosteus_oculatus
ENSBTAG00000006280RBFOX39784.900ENSLAFG00000016623RBFOX39486.610Loxodonta_africana
ENSBTAG00000006280RBFOX39791.536ENSMFAG00000002247RBFOX39688.372Macaca_fascicularis
ENSBTAG00000006280RBFOX310097.561ENSMMUG00000023028RBFOX310097.561Macaca_mulatta
ENSBTAG00000006280RBFOX39791.223ENSMNEG00000041147RBFOX39296.864Macaca_nemestrina
ENSBTAG00000006280RBFOX39791.536ENSMLEG00000025686RBFOX39296.864Mandrillus_leucophaeus
ENSBTAG00000006280RBFOX39357.227ENSMAMG00000020600-7476.357Mastacembelus_armatus
ENSBTAG00000006280RBFOX37876.307ENSMAMG00000019810rbfox3b7880.085Mastacembelus_armatus
ENSBTAG00000006280RBFOX37860.312ENSMZEG00005003055-5891.045Maylandia_zebra
ENSBTAG00000006280RBFOX310063.712ENSMZEG00005000781rbfox3b6981.176Maylandia_zebra
ENSBTAG00000006280RBFOX35290.625ENSMGAG00000005600RBFOX37390.625Meleagris_gallopavo
ENSBTAG00000006280RBFOX39593.333ENSMAUG00000013543Rbfox39590.794Mesocricetus_auratus
ENSBTAG00000006280RBFOX310095.427ENSMICG00000014898RBFOX39995.427Microcebus_murinus
ENSBTAG00000006280RBFOX39791.562ENSMOCG00000015373Rbfox39791.562Microtus_ochrogaster
ENSBTAG00000006280RBFOX310060.109ENSMMOG00000020193rbfox3b7081.818Mola_mola
ENSBTAG00000006280RBFOX39571.802ENSMODG00000002089RBFOX37692.647Monodelphis_domestica
ENSBTAG00000006280RBFOX38287.500ENSMALG00000018270-7679.167Monopterus_albus
ENSBTAG00000006280RBFOX310065.994ENSMALG00000020407rbfox3b6980.784Monopterus_albus
ENSBTAG00000006280RBFOX39792.188MGP_CAROLIEiJ_G0017487Rbfox39694.245Mus_caroli
ENSBTAG00000006280RBFOX39793.438ENSMUSG00000025576Rbfox39694.245Mus_musculus
ENSBTAG00000006280RBFOX39792.523MGP_PahariEiJ_G0018614Rbfox39694.964Mus_pahari
ENSBTAG00000006280RBFOX39792.500MGP_SPRETEiJ_G0018331Rbfox39694.245Mus_spretus
ENSBTAG00000006280RBFOX39768.475ENSMPUG00000012319RBFOX38586.111Mustela_putorius_furo
ENSBTAG00000006280RBFOX39792.500ENSNGAG00000018006Rbfox39792.500Nannospalax_galili
ENSBTAG00000006280RBFOX37693.333ENSNBRG00000022885-7793.103Neolamprologus_brichardi
ENSBTAG00000006280RBFOX37192.593ENSNBRG00000010102rbfox3b7492.593Neolamprologus_brichardi
ENSBTAG00000006280RBFOX358100.000ENSNLEG00000000153-79100.000Nomascus_leucogenys
ENSBTAG00000006280RBFOX39561.919ENSMEUG00000004218-9661.337Notamacropus_eugenii
ENSBTAG00000006280RBFOX36093.333ENSOPRG00000016279-6593.333Ochotona_princeps
ENSBTAG00000006280RBFOX310096.353ENSODEG00000009433RBFOX310096.353Octodon_degus
ENSBTAG00000006280RBFOX310068.956ENSONIG00000009549rbfox3b9265.903Oreochromis_niloticus
ENSBTAG00000006280RBFOX310059.043ENSONIG00000007282-7481.176Oreochromis_niloticus
ENSBTAG00000006280RBFOX37770.877ENSOCUG00000014217RBFOX37869.825Oryctolagus_cuniculus
ENSBTAG00000006280RBFOX310063.536ENSORLG00000000905rbfox3b5581.176Oryzias_latipes
ENSBTAG00000006280RBFOX310069.486ENSORLG00020018030rbfox3b8965.190Oryzias_latipes_hni
ENSBTAG00000006280RBFOX310069.184ENSORLG00015009200rbfox3b8593.103Oryzias_latipes_hsok
ENSBTAG00000006280RBFOX36378.199ENSOMEG00000014677rbfox3b7676.995Oryzias_melastigma
ENSBTAG00000006280RBFOX37495.588ENSOGAG00000029595RBFOX37395.588Otolemur_garnettii
ENSBTAG00000006280RBFOX372100.000ENSOARG00000002908RBFOX37368.327Ovis_aries
ENSBTAG00000006280RBFOX39297.351ENSPPAG00000025383RBFOX310097.203Pan_paniscus
ENSBTAG00000006280RBFOX39794.044ENSPPRG00000007819RBFOX39794.044Panthera_pardus
ENSBTAG00000006280RBFOX310097.561ENSPTRG00000009727RBFOX39697.561Pan_troglodytes
ENSBTAG00000006280RBFOX39791.536ENSPANG00000019837RBFOX39296.864Papio_anubis
ENSBTAG00000006280RBFOX39571.293ENSPKIG00000010299rbfox3a7384.314Paramormyrops_kingsleyae
ENSBTAG00000006280RBFOX310056.024ENSPKIG00000022633-6968.504Paramormyrops_kingsleyae
ENSBTAG00000006280RBFOX37283.582ENSPMGG00000008000rbfox3b7783.004Periophthalmus_magnuspinnatus
ENSBTAG00000006280RBFOX39791.875ENSPEMG00000010500Rbfox39791.875Peromyscus_maniculatus_bairdii
ENSBTAG00000006280RBFOX35955.502ENSPMAG00000008689rbfox3b6976.596Petromyzon_marinus
ENSBTAG00000006280RBFOX39593.610ENSPCIG00000005766RBFOX39193.610Phascolarctos_cinereus
ENSBTAG00000006280RBFOX310072.156ENSPFOG00000018294rbfox3b9268.966Poecilia_formosa
ENSBTAG00000006280RBFOX35879.452ENSPLAG00000000481rbfox3b5786.127Poecilia_latipinna
ENSBTAG00000006280RBFOX310069.697ENSPMEG00000022997rbfox3b9565.506Poecilia_mexicana
ENSBTAG00000006280RBFOX310064.088ENSPREG00000012886rbfox3b7382.353Poecilia_reticulata
ENSBTAG00000006280RBFOX37089.922ENSPPYG00000008704RBFOX37689.922Pongo_abelii
ENSBTAG00000006280RBFOX39581.159ENSPCAG00000001401RBFOX39683.188Procavia_capensis
ENSBTAG00000006280RBFOX310096.037ENSPCOG00000012689RBFOX39196.037Propithecus_coquereli
ENSBTAG00000006280RBFOX310079.501ENSPVAG00000015243RBFOX310079.501Pteropus_vampyrus
ENSBTAG00000006280RBFOX37192.593ENSPNYG00000010414rbfox3b7492.593Pundamilia_nyererei
ENSBTAG00000006280RBFOX37693.333ENSPNYG00000009079-7393.103Pundamilia_nyererei
ENSBTAG00000006280RBFOX38287.234ENSPNAG00000018173rbfox3b8273.846Pygocentrus_nattereri
ENSBTAG00000006280RBFOX39567.085ENSPNAG00000002889rbfox3a9362.069Pygocentrus_nattereri
ENSBTAG00000006280RBFOX39584.104ENSRNOG00000003386Rbfox39284.971Rattus_norvegicus
ENSBTAG00000006280RBFOX39791.850ENSRBIG00000040449RBFOX378100.000Rhinopithecus_bieti
ENSBTAG00000006280RBFOX39791.850ENSRROG00000000766RBFOX39297.213Rhinopithecus_roxellana
ENSBTAG00000006280RBFOX310096.646ENSSBOG00000031591RBFOX310096.646Saimiri_boliviensis_boliviensis
ENSBTAG00000006280RBFOX39578.594ENSSHAG00000016076RBFOX39578.594Sarcophilus_harrisii
ENSBTAG00000006280RBFOX39569.716ENSSFOG00015023260rbfox3a8970.978Scleropages_formosus
ENSBTAG00000006280RBFOX39655.205ENSSFOG00015004716RBFOX38954.114Scleropages_formosus
ENSBTAG00000006280RBFOX310065.994ENSSMAG00000012618rbfox3b6177.491Scophthalmus_maximus
ENSBTAG00000006280RBFOX310067.771ENSSMAG00000019052-8180.000Scophthalmus_maximus
ENSBTAG00000006280RBFOX39565.909ENSSDUG00000015801-7393.103Seriola_dumerili
ENSBTAG00000006280RBFOX310069.697ENSSDUG00000023183rbfox3b9565.506Seriola_dumerili
ENSBTAG00000006280RBFOX37589.583ENSSLDG00000016098-6880.165Seriola_lalandi_dorsalis
ENSBTAG00000006280RBFOX310063.712ENSSLDG00000000149rbfox3b6981.961Seriola_lalandi_dorsalis
ENSBTAG00000006280RBFOX39574.286ENSSPUG00000011733RBFOX38188.976Sphenodon_punctatus
ENSBTAG00000006280RBFOX37474.820ENSSPAG00000004898-7574.510Stegastes_partitus
ENSBTAG00000006280RBFOX38285.106ENSSPAG00000017571rbfox3b6574.059Stegastes_partitus
ENSBTAG00000006280RBFOX38787.975ENSSSCG00000039498RBFOX39687.975Sus_scrofa
ENSBTAG00000006280RBFOX310059.504ENSTRUG00000004894rbfox3b7279.923Takifugu_rubripes
ENSBTAG00000006280RBFOX310057.614ENSTNIG00000011278rbfox3b7172.474Tetraodon_nigroviridis
ENSBTAG00000006280RBFOX39269.880ENSTBEG00000004296-8969.880Tupaia_belangeri
ENSBTAG00000006280RBFOX39785.143ENSTTRG00000003676RBFOX39785.143Tursiops_truncatus
ENSBTAG00000006280RBFOX37896.864ENSUAMG00000004668RBFOX39296.864Ursus_americanus
ENSBTAG00000006280RBFOX38888.715ENSVVUG00000017864RBFOX39297.561Vulpes_vulpes
ENSBTAG00000006280RBFOX310054.167ENSXETG00000020236rbfox38153.161Xenopus_tropicalis
ENSBTAG00000006280RBFOX310062.431ENSXCOG00000018262rbfox3b8079.916Xiphophorus_couchianus
ENSBTAG00000006280RBFOX310065.994ENSXMAG00000012939rbfox3b9162.651Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0006397mRNA processing-IEAProcess
GO:0008380RNA splicing-IEAProcess

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