EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000006321 (Gene tree)
Gene ID: 510469
Gene Symbol: RTCA
Alias: -
Full Name: Bos taurus RNA 3'-terminal phosphate cyclase (RTCA)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 28074 bases
Position: chr3:43006658-43034731
Accession: NM_001046055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000008293	RTC	PF01137.21	1.1e-87	1	1
ENSBTAP00000008293	RTC_insert	PF05189.13	1.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000008293	-	1540	-	ENSBTAP00000008293	366 (aa)	-	Q2HJ88

Gene Model

Click here to download ENSBTAG00000006321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000006321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000006321	RTCA	100	95.628	ENSG00000137996	RTCA	100	97.959	Homo_sapiens
ENSBTAG00000006321	RTCA	99	72.576	ENSAPOG00000001345	rtca	98	72.576	Acanthochromis_polyacanthus
ENSBTAG00000006321	RTCA	73	95.539	ENSAMEG00000008855	RTCA	100	95.539	Ailuropoda_melanoleuca
ENSBTAG00000006321	RTCA	99	72.299	ENSACIG00000019643	rtca	99	72.299	Amphilophus_citrinellus
ENSBTAG00000006321	RTCA	100	71.858	ENSAOCG00000014979	rtca	99	71.858	Amphiprion_ocellaris
ENSBTAG00000006321	RTCA	100	71.858	ENSAPEG00000006945	rtca	99	71.858	Amphiprion_percula
ENSBTAG00000006321	RTCA	100	70.492	ENSATEG00000006315	rtca	100	70.492	Anabas_testudineus
ENSBTAG00000006321	RTCA	96	81.356	ENSAPLG00000015430	RTCA	100	81.356	Anas_platyrhynchos
ENSBTAG00000006321	RTCA	100	94.536	ENSANAG00000025446	RTCA	100	94.536	Aotus_nancymaae
ENSBTAG00000006321	RTCA	100	71.038	ENSACLG00000020770	rtca	99	71.038	Astatotilapia_calliptera
ENSBTAG00000006321	RTCA	100	73.770	ENSAMXG00000043271	rtca	100	73.770	Astyanax_mexicanus
ENSBTAG00000006321	RTCA	100	94.809	ENSCJAG00000003398	RTCA	100	94.809	Callithrix_jacchus
ENSBTAG00000006321	RTCA	100	96.448	ENSCAFG00000020010	RTCA	68	96.448	Canis_familiaris
ENSBTAG00000006321	RTCA	100	96.448	ENSCAFG00020011528	RTCA	57	96.448	Canis_lupus_dingo
ENSBTAG00000006321	RTCA	100	99.727	ENSCHIG00000018937	RTCA	100	99.727	Capra_hircus
ENSBTAG00000006321	RTCA	100	93.989	ENSTSYG00000011305	RTCA	100	93.989	Carlito_syrichta
ENSBTAG00000006321	RTCA	100	94.536	ENSCCAG00000021844	RTCA	100	94.536	Cebus_capucinus
ENSBTAG00000006321	RTCA	100	92.348	ENSCATG00000019364	RTCA	100	95.146	Cercocebus_atys
ENSBTAG00000006321	RTCA	87	94.953	ENSCLAG00000006125	RTCA	100	94.953	Chinchilla_lanigera
ENSBTAG00000006321	RTCA	100	95.902	ENSCSAG00000001509	RTCA	100	95.902	Chlorocebus_sabaeus
ENSBTAG00000006321	RTCA	100	95.082	ENSCHOG00000005211	RTCA	100	95.082	Choloepus_hoffmanni
ENSBTAG00000006321	RTCA	100	84.699	ENSCPBG00000026658	RTCA	100	84.699	Chrysemys_picta_bellii
ENSBTAG00000006321	RTCA	98	55.556	ENSCING00000007875	-	98	55.556	Ciona_intestinalis
ENSBTAG00000006321	RTCA	98	54.722	ENSCSAVG00000007269	-	98	54.722	Ciona_savignyi
ENSBTAG00000006321	RTCA	100	95.628	ENSCANG00000040106	RTCA	100	95.628	Colobus_angolensis_palliatus
ENSBTAG00000006321	RTCA	73	92.565	ENSCGRG00001013163	Rtca	85	92.565	Cricetulus_griseus_chok1gshd
ENSBTAG00000006321	RTCA	99	69.315	ENSCSEG00000000530	rtca	98	69.315	Cynoglossus_semilaevis
ENSBTAG00000006321	RTCA	100	60.109	ENSCVAG00000021809	rtca	100	60.109	Cyprinodon_variegatus
ENSBTAG00000006321	RTCA	100	74.044	ENSDARG00000002215	rtca	100	74.044	Danio_rerio
ENSBTAG00000006321	RTCA	100	95.082	ENSDNOG00000000456	RTCA	100	95.082	Dasypus_novemcinctus
ENSBTAG00000006321	RTCA	100	93.989	ENSDORG00000005448	Rtca	100	93.989	Dipodomys_ordii
ENSBTAG00000006321	RTCA	98	38.268	FBgn0025630	Rtca	98	38.268	Drosophila_melanogaster
ENSBTAG00000006321	RTCA	95	54.520	ENSEBUG00000008556	rtca	97	54.520	Eptatretus_burgeri
ENSBTAG00000006321	RTCA	100	96.448	ENSEASG00005015926	RTCA	100	96.448	Equus_asinus_asinus
ENSBTAG00000006321	RTCA	100	96.448	ENSECAG00000019831	RTCA	100	96.448	Equus_caballus
ENSBTAG00000006321	RTCA	91	83.526	ENSEEUG00000001165	RTCA	100	83.526	Erinaceus_europaeus
ENSBTAG00000006321	RTCA	99	72.853	ENSELUG00000003741	rtca	99	72.853	Esox_lucius
ENSBTAG00000006321	RTCA	100	96.995	ENSFCAG00000024460	RTCA	100	96.995	Felis_catus
ENSBTAG00000006321	RTCA	93	82.353	ENSFALG00000002443	RTCA	91	82.353	Ficedula_albicollis
ENSBTAG00000006321	RTCA	98	73.757	ENSFDAG00000016084	-	100	73.757	Fukomys_damarensis
ENSBTAG00000006321	RTCA	100	95.628	ENSFDAG00000012070	-	100	95.628	Fukomys_damarensis
ENSBTAG00000006321	RTCA	72	62.595	ENSFHEG00000002868	rtca	96	69.027	Fundulus_heteroclitus
ENSBTAG00000006321	RTCA	100	69.945	ENSGMOG00000013264	rtca	100	69.945	Gadus_morhua
ENSBTAG00000006321	RTCA	100	84.153	ENSGALG00000005277	RTCA	100	84.153	Gallus_gallus
ENSBTAG00000006321	RTCA	100	72.131	ENSGAFG00000011853	rtca	99	72.131	Gambusia_affinis
ENSBTAG00000006321	RTCA	100	69.945	ENSGACG00000013497	rtca	100	69.945	Gasterosteus_aculeatus
ENSBTAG00000006321	RTCA	80	85.666	ENSGAGG00000023306	RTCA	100	85.666	Gopherus_agassizii
ENSBTAG00000006321	RTCA	100	94.809	ENSGGOG00000044018	-	100	94.809	Gorilla_gorilla
ENSBTAG00000006321	RTCA	100	95.628	ENSGGOG00000009546	-	100	95.628	Gorilla_gorilla
ENSBTAG00000006321	RTCA	100	70.765	ENSHBUG00000002114	rtca	99	70.765	Haplochromis_burtoni
ENSBTAG00000006321	RTCA	100	94.536	ENSHGLG00000002617	RTCA	100	94.536	Heterocephalus_glaber_female
ENSBTAG00000006321	RTCA	100	94.536	ENSHGLG00100006056	RTCA	100	94.536	Heterocephalus_glaber_male
ENSBTAG00000006321	RTCA	100	64.481	ENSHCOG00000020628	rtca	89	64.481	Hippocampus_comes
ENSBTAG00000006321	RTCA	100	74.044	ENSIPUG00000024803	rtca	100	74.044	Ictalurus_punctatus
ENSBTAG00000006321	RTCA	100	83.379	ENSSTOG00000033099	-	100	83.379	Ictidomys_tridecemlineatus
ENSBTAG00000006321	RTCA	100	87.978	ENSSTOG00000013528	-	100	87.978	Ictidomys_tridecemlineatus
ENSBTAG00000006321	RTCA	100	68.033	ENSJJAG00000016178	Rtca	100	68.033	Jaculus_jaculus
ENSBTAG00000006321	RTCA	99	73.130	ENSKMAG00000006651	rtca	98	73.130	Kryptolebias_marmoratus
ENSBTAG00000006321	RTCA	88	69.470	ENSLBEG00000002448	-	99	69.470	Labrus_bergylta
ENSBTAG00000006321	RTCA	99	69.806	ENSLBEG00000028971	rtca	99	69.806	Labrus_bergylta
ENSBTAG00000006321	RTCA	100	77.596	ENSLACG00000013666	RTCA	100	77.596	Latimeria_chalumnae
ENSBTAG00000006321	RTCA	100	73.224	ENSLOCG00000000093	rtca	99	73.224	Lepisosteus_oculatus
ENSBTAG00000006321	RTCA	100	94.536	ENSLAFG00000001473	RTCA	100	94.536	Loxodonta_africana
ENSBTAG00000006321	RTCA	100	95.902	ENSMFAG00000034132	RTCA	100	95.902	Macaca_fascicularis
ENSBTAG00000006321	RTCA	100	95.355	ENSMMUG00000019105	RTCA	100	95.355	Macaca_mulatta
ENSBTAG00000006321	RTCA	84	95.469	ENSMNEG00000037163	RTCA	100	95.469	Macaca_nemestrina
ENSBTAG00000006321	RTCA	100	79.235	ENSMLEG00000042151	RTCA	100	79.235	Mandrillus_leucophaeus
ENSBTAG00000006321	RTCA	100	73.224	ENSMAMG00000016536	rtca	100	73.224	Mastacembelus_armatus
ENSBTAG00000006321	RTCA	100	71.038	ENSMZEG00005017945	rtca	99	71.038	Maylandia_zebra
ENSBTAG00000006321	RTCA	87	82.759	ENSMGAG00000006892	RTCA	99	82.759	Meleagris_gallopavo
ENSBTAG00000006321	RTCA	100	92.350	ENSMAUG00000008488	Rtca	100	92.350	Mesocricetus_auratus
ENSBTAG00000006321	RTCA	84	96.117	ENSMICG00000008643	RTCA	100	96.117	Microcebus_murinus
ENSBTAG00000006321	RTCA	100	93.169	ENSMOCG00000016660	Rtca	100	93.169	Microtus_ochrogaster
ENSBTAG00000006321	RTCA	84	72.492	ENSMMOG00000007750	rtca	100	72.492	Mola_mola
ENSBTAG00000006321	RTCA	100	90.984	ENSMODG00000003557	RTCA	100	90.984	Monodelphis_domestica
ENSBTAG00000006321	RTCA	100	73.224	ENSMALG00000020844	rtca	100	73.224	Monopterus_albus
ENSBTAG00000006321	RTCA	100	92.623	MGP_CAROLIEiJ_G0025565	Rtca	100	92.623	Mus_caroli
ENSBTAG00000006321	RTCA	100	92.077	ENSMUSG00000000339	Rtca	100	92.077	Mus_musculus
ENSBTAG00000006321	RTCA	100	92.350	MGP_PahariEiJ_G0027011	Rtca	100	92.350	Mus_pahari
ENSBTAG00000006321	RTCA	100	92.350	MGP_SPRETEiJ_G0026515	Rtca	100	92.350	Mus_spretus
ENSBTAG00000006321	RTCA	100	96.721	ENSMPUG00000012119	RTCA	100	96.721	Mustela_putorius_furo
ENSBTAG00000006321	RTCA	100	88.556	ENSMLUG00000009922	RTCA	100	88.556	Myotis_lucifugus
ENSBTAG00000006321	RTCA	100	92.077	ENSNGAG00000011540	Rtca	99	92.077	Nannospalax_galili
ENSBTAG00000006321	RTCA	100	71.038	ENSNBRG00000003062	rtca	99	71.038	Neolamprologus_brichardi
ENSBTAG00000006321	RTCA	100	95.628	ENSNLEG00000031426	RTCA	100	95.628	Nomascus_leucogenys
ENSBTAG00000006321	RTCA	58	95.122	ENSMEUG00000010030	-	77	78.788	Notamacropus_eugenii
ENSBTAG00000006321	RTCA	73	89.591	ENSOPRG00000012092	RTCA	71	89.591	Ochotona_princeps
ENSBTAG00000006321	RTCA	95	94.540	ENSODEG00000006990	RTCA	96	94.587	Octodon_degus
ENSBTAG00000006321	RTCA	100	70.765	ENSONIG00000007753	rtca	99	70.765	Oreochromis_niloticus
ENSBTAG00000006321	RTCA	87	88.644	ENSOANG00000012055	RTCA	98	88.644	Ornithorhynchus_anatinus
ENSBTAG00000006321	RTCA	100	96.175	ENSOCUG00000014247	RTCA	100	96.175	Oryctolagus_cuniculus
ENSBTAG00000006321	RTCA	100	71.311	ENSORLG00000013605	rtca	100	71.311	Oryzias_latipes
ENSBTAG00000006321	RTCA	100	71.311	ENSORLG00020001904	rtca	100	71.311	Oryzias_latipes_hni
ENSBTAG00000006321	RTCA	100	71.311	ENSORLG00015021064	rtca	100	71.311	Oryzias_latipes_hsok
ENSBTAG00000006321	RTCA	100	71.858	ENSOMEG00000000756	rtca	100	71.858	Oryzias_melastigma
ENSBTAG00000006321	RTCA	100	85.519	ENSOGAG00000005627	RTCA	100	85.519	Otolemur_garnettii
ENSBTAG00000006321	RTCA	87	99.057	ENSOARG00000018122	RTCA	100	99.057	Ovis_aries
ENSBTAG00000006321	RTCA	100	92.084	ENSPPAG00000035119	RTCA	100	95.146	Pan_paniscus
ENSBTAG00000006321	RTCA	100	96.721	ENSPPRG00000000350	RTCA	100	96.721	Panthera_pardus
ENSBTAG00000006321	RTCA	100	96.721	ENSPTIG00000012816	RTCA	100	96.721	Panthera_tigris_altaica
ENSBTAG00000006321	RTCA	100	92.084	ENSPTRG00000001004	RTCA	100	95.146	Pan_troglodytes
ENSBTAG00000006321	RTCA	100	95.628	ENSPANG00000000346	RTCA	100	95.628	Papio_anubis
ENSBTAG00000006321	RTCA	100	74.863	ENSPKIG00000001653	rtca	100	74.863	Paramormyrops_kingsleyae
ENSBTAG00000006321	RTCA	100	85.246	ENSPSIG00000011408	RTCA	100	85.246	Pelodiscus_sinensis
ENSBTAG00000006321	RTCA	100	92.896	ENSPEMG00000018582	Rtca	100	92.896	Peromyscus_maniculatus_bairdii
ENSBTAG00000006321	RTCA	100	58.856	ENSPMAG00000009110	rtca	100	58.856	Petromyzon_marinus
ENSBTAG00000006321	RTCA	100	91.803	ENSPCIG00000007684	RTCA	100	91.803	Phascolarctos_cinereus
ENSBTAG00000006321	RTCA	100	72.480	ENSPFOG00000004824	rtca	100	72.480	Poecilia_formosa
ENSBTAG00000006321	RTCA	100	72.678	ENSPLAG00000011753	rtca	99	72.678	Poecilia_latipinna
ENSBTAG00000006321	RTCA	100	72.678	ENSPMEG00000020469	rtca	99	72.678	Poecilia_mexicana
ENSBTAG00000006321	RTCA	100	73.497	ENSPREG00000001365	rtca	99	73.497	Poecilia_reticulata
ENSBTAG00000006321	RTCA	100	95.628	ENSPPYG00000001115	RTCA	100	95.628	Pongo_abelii
ENSBTAG00000006321	RTCA	100	91.257	ENSPCAG00000005076	RTCA	100	91.257	Procavia_capensis
ENSBTAG00000006321	RTCA	100	96.448	ENSPCOG00000005603	RTCA	100	96.448	Propithecus_coquereli
ENSBTAG00000006321	RTCA	100	91.293	ENSPVAG00000009478	RTCA	100	91.293	Pteropus_vampyrus
ENSBTAG00000006321	RTCA	100	71.038	ENSPNYG00000004722	rtca	99	71.038	Pundamilia_nyererei
ENSBTAG00000006321	RTCA	100	73.770	ENSPNAG00000022270	rtca	100	73.770	Pygocentrus_nattereri
ENSBTAG00000006321	RTCA	100	93.169	ENSRNOG00000014575	Rtca	100	93.169	Rattus_norvegicus
ENSBTAG00000006321	RTCA	100	91.821	ENSRBIG00000041180	RTCA	100	94.498	Rhinopithecus_bieti
ENSBTAG00000006321	RTCA	100	95.082	ENSRROG00000024929	RTCA	100	95.082	Rhinopithecus_roxellana
ENSBTAG00000006321	RTCA	100	93.989	ENSSBOG00000028626	RTCA	100	93.989	Saimiri_boliviensis_boliviensis
ENSBTAG00000006321	RTCA	100	92.077	ENSSHAG00000001758	RTCA	100	92.077	Sarcophilus_harrisii
ENSBTAG00000006321	RTCA	98	70.000	ENSSMAG00000014680	rtca	97	70.000	Scophthalmus_maximus
ENSBTAG00000006321	RTCA	98	71.944	ENSSDUG00000015585	rtca	97	71.944	Seriola_dumerili
ENSBTAG00000006321	RTCA	96	72.365	ENSSLDG00000018985	rtca	95	72.365	Seriola_lalandi_dorsalis
ENSBTAG00000006321	RTCA	87	87.697	ENSSARG00000013993	RTCA	100	87.697	Sorex_araneus
ENSBTAG00000006321	RTCA	100	71.038	ENSSPAG00000011938	rtca	99	71.038	Stegastes_partitus
ENSBTAG00000006321	RTCA	100	97.814	ENSSSCG00000006865	RTCA	100	97.814	Sus_scrofa
ENSBTAG00000006321	RTCA	100	83.880	ENSTGUG00000005154	RTCA	100	83.880	Taeniopygia_guttata
ENSBTAG00000006321	RTCA	100	71.585	ENSTRUG00000008799	rtca	100	71.585	Takifugu_rubripes
ENSBTAG00000006321	RTCA	100	72.131	ENSTNIG00000004725	rtca	100	72.131	Tetraodon_nigroviridis
ENSBTAG00000006321	RTCA	59	82.727	ENSTBEG00000000943	RTCA	82	68.067	Tupaia_belangeri
ENSBTAG00000006321	RTCA	100	93.931	ENSTTRG00000015327	RTCA	100	93.931	Tursiops_truncatus
ENSBTAG00000006321	RTCA	94	93.586	ENSUAMG00000017265	RTCA	96	93.586	Ursus_americanus
ENSBTAG00000006321	RTCA	100	95.628	ENSUMAG00000007881	RTCA	100	95.628	Ursus_maritimus
ENSBTAG00000006321	RTCA	87	87.066	ENSVPAG00000001039	RTCA	84	87.066	Vicugna_pacos
ENSBTAG00000006321	RTCA	100	96.175	ENSVVUG00000022041	RTCA	68	96.175	Vulpes_vulpes
ENSBTAG00000006321	RTCA	99	65.940	ENSXETG00000031661	RTCA	99	65.940	Xenopus_tropicalis
ENSBTAG00000006321	RTCA	100	63.115	ENSXCOG00000008002	rtca	100	63.115	Xiphophorus_couchianus
ENSBTAG00000006321	RTCA	100	72.404	ENSXMAG00000005482	rtca	99	72.404	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0006396	RNA processing	-	IEA	Process